EnhancerDB
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  3. vista42271[chr3:125113338-125113617]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42271[chr3:125113338-125113617]
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Tissue distribution of vista42271
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Transcription factor that possibly regulate vista42271[chr3:125113338-125113617]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 125113347 125113357 SP1 JASPAR yes 5442539
chr3 125113347 125113357 SP1 JASPAR yes 71044451
chr3 125113350 125113365 STAT1 JASPAR yes 5442540
chr3 125113350 125113365 STAT1 JASPAR yes 71044452
chr3 125113352 125113363 STAT1 JASPAR yes 5442541
chr3 125113352 125113363 STAT3 JASPAR yes 5442542
chr3 125113352 125113363 STAT1 JASPAR yes 71044453
chr3 125113352 125113363 STAT3 JASPAR yes 71044454
chr3 125113357 125113372 FOXP1 JASPAR yes 5442543
chr3 125113357 125113372 FOXP1 JASPAR yes 71044455
chr3 125113366 125113372 HiNF-A TRANSFAC yes 5442544
chr3 125113366 125113372 HiNF-A TRANSFAC yes 71044456
chr3 125113385 125113402 BCL6B JASPAR yes 5442545
chr3 125113385 125113402 BCL6B JASPAR yes 71044457
chr3 125113405 125113421 NFYA JASPAR yes 5442546
chr3 125113405 125113421 NFYA JASPAR yes 71044458
chr3 125113410 125113414 H1TF2 TRANSFAC yes 5442547
chr3 125113410 125113414 NFE TRANSFAC yes 5442548
chr3 125113410 125113414 SRF TRANSFAC yes 5442549
chr3 125113410 125113414 H1TF2 TRANSFAC yes 71044459
chr3 125113410 125113414 NFE TRANSFAC yes 71044460
chr3 125113410 125113414 SRF TRANSFAC yes 71044461
chr3 125113416 125113422 ATF1 TRANSFAC yes 5442550
chr3 125113416 125113422 ATF1 TRANSFAC yes 71044462
chr3 125113416 125113423 XBP1 TRANSFAC yes 5442551
chr3 125113416 125113423 XBP1 TRANSFAC yes 71044463
chr3 125113416 125113428 CREB1 JASPAR yes 5442552
chr3 125113416 125113428 CREB1 JASPAR yes 71044464
chr3 125113426 125113438 HNF1B JASPAR yes 5442553
chr3 125113426 125113438 HNF1B JASPAR yes 71044465
chr3 125113432 125113442 ALX3 JASPAR yes 5442554
chr3 125113432 125113442 GSX1 JASPAR yes 5442555
chr3 125113432 125113442 GSX2 JASPAR yes 5442556
chr3 125113432 125113442 HOXB2 JASPAR yes 5442557
chr3 125113432 125113442 HOXB3 JASPAR yes 5442558
chr3 125113432 125113442 MEOX2 JASPAR yes 5442559
chr3 125113432 125113442 MIXL1 JASPAR yes 5442560
chr3 125113432 125113442 MNX1 JASPAR yes 5442561
chr3 125113432 125113442 ALX3 JASPAR yes 71044466
chr3 125113432 125113442 GSX1 JASPAR yes 71044467
chr3 125113432 125113442 GSX2 JASPAR yes 71044468
chr3 125113432 125113442 HOXB2 JASPAR yes 71044469
chr3 125113432 125113442 HOXB3 JASPAR yes 71044470
chr3 125113432 125113442 MEOX2 JASPAR yes 71044471
chr3 125113432 125113442 MIXL1 JASPAR yes 71044472
chr3 125113432 125113442 MNX1 JASPAR yes 71044473
chr3 125113433 125113441 DLX6 JASPAR yes 5442562
chr3 125113433 125113441 EN1 JASPAR yes 5442563
chr3 125113433 125113441 LBX1 JASPAR yes 5442564
chr3 125113433 125113441 PAX4 JASPAR yes 5442565
chr3 125113433 125113441 PDX1 JASPAR yes 5442566
chr3 125113433 125113441 VAX1 JASPAR yes 5442567
chr3 125113433 125113441 VAX2 JASPAR yes 5442568
chr3 125113433 125113441 VSX1 JASPAR yes 5442569
chr3 125113433 125113441 VSX2 JASPAR yes 5442570
chr3 125113433 125113441 DLX6 JASPAR yes 71044474
chr3 125113433 125113441 EN1 JASPAR yes 71044475
chr3 125113433 125113441 LBX1 JASPAR yes 71044476
chr3 125113433 125113441 PAX4 JASPAR yes 71044477
chr3 125113433 125113441 PDX1 JASPAR yes 71044478
chr3 125113433 125113441 VAX1 JASPAR yes 71044479
chr3 125113433 125113441 VAX2 JASPAR yes 71044480
chr3 125113433 125113441 VSX1 JASPAR yes 71044481
chr3 125113433 125113441 VSX2 JASPAR yes 71044482
chr3 125113450 125113459 HIC2 JASPAR yes 5442571
chr3 125113450 125113459 HIC2 JASPAR yes 71044483
chr3 125113453 125113463 CLOCK JASPAR yes 5442572
chr3 125113453 125113463 HEY1 JASPAR yes 5442573
chr3 125113453 125113463 HEY2 JASPAR yes 5442574
chr3 125113453 125113463 MAX JASPAR yes 5442575
chr3 125113453 125113463 MNT JASPAR yes 5442576
chr3 125113453 125113463 CLOCK JASPAR yes 71044484
chr3 125113453 125113463 HEY1 JASPAR yes 71044485
chr3 125113453 125113463 HEY2 JASPAR yes 71044486
chr3 125113453 125113463 MAX JASPAR yes 71044487
chr3 125113453 125113463 MNT JASPAR yes 71044488
chr3 125113453 125113464 USF1 JASPAR yes 5442577
chr3 125113453 125113464 USF1 JASPAR yes 71044489
chr3 125113454 125113461 USF1 JASPAR yes 5442578
chr3 125113454 125113461 USF1 JASPAR yes 71044490
chr3 125113454 125113464 MAX JASPAR yes 5442579
chr3 125113454 125113464 MAX JASPAR yes 71044491
chr3 125113455 125113460 MYC TRANSFAC yes 5442580
chr3 125113455 125113460 USF1 TRANSFAC yes 5442581
chr3 125113455 125113460 USF2 TRANSFAC yes 5442582
chr3 125113455 125113460 MYC TRANSFAC yes 71044492
chr3 125113455 125113460 USF1 TRANSFAC yes 71044493
chr3 125113455 125113460 USF2 TRANSFAC yes 71044494
chr3 125113464 125113468 YY1 TRANSFAC yes 5442583
chr3 125113464 125113468 YY1 TRANSFAC yes 71044495
chr3 125113486 125113490 YY1 TRANSFAC yes 5442584
chr3 125113486 125113490 YY1 TRANSFAC yes 71044496
chr3 125113495 125113508 DUXA JASPAR yes 5442585
chr3 125113495 125113508 DUXA JASPAR yes 71044497
chr3 125113496 125113507 DUX4 JASPAR yes 5442586
chr3 125113496 125113507 DUX4 JASPAR yes 71044498
chr3 125113516 125113520 YY1 TRANSFAC yes 5442587
chr3 125113516 125113520 YY1 TRANSFAC yes 71044499
chr3 125113526 125113547 ZNF263 JASPAR yes 5442588
chr3 125113526 125113547 ZNF263 JASPAR yes 71044500
chr3 125113540 125113547 SPIB JASPAR yes 5442589
chr3 125113540 125113547 SPIB JASPAR yes 71044501
chr3 125113555 125113559 YY1 TRANSFAC yes 5442590
chr3 125113555 125113559 YY1 TRANSFAC yes 71044502
chr3 125113555 125113570 STAT1 JASPAR yes 5442591
chr3 125113555 125113570 STAT1 JASPAR yes 71044503
chr3 125113557 125113568 STAT1 JASPAR yes 5442592
chr3 125113557 125113568 STAT3 JASPAR yes 5442593
chr3 125113557 125113568 STAT1 JASPAR yes 71044504
chr3 125113557 125113568 STAT3 JASPAR yes 71044505
chr3 125113567 125113578 FOXA1 JASPAR yes 5442594
chr3 125113567 125113578 FOXA1 JASPAR yes 71044506
chr3 125113580 125113595 AR JASPAR yes 5442595
chr3 125113580 125113595 AR JASPAR yes 71044507
chr3 125113580 125113598 NR3C1 JASPAR yes 5442596
chr3 125113580 125113598 NR3C1 JASPAR yes 71044508
SNP sites on vista42271[chr3:125113338-125113617]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 125113359 rs115711008 A T
FOXP1 STAT1 STAT3
7003258
chr3 125113378 rs76724985 A G no 7003259
chr3 125113419 rs563079295 C T
ATF1 CREB1 NFYA XBP1
7003260
Genes possibly regulated by vista42271[chr3:125113338-125113617]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 124944405 125094198 - ZNF148 ENSG00000163848.14 125094198 0.69 0.99 4025 80860
Expression level of Genes
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miRNAs possibly regulated by vista42271[chr3:125113338-125113617]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results