EnhancerDB
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  3. vista42272[chr3:125200225-125200611]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42272[chr3:125200225-125200611]
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Tissue distribution of vista42272
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Transcription factor that possibly regulate vista42272[chr3:125200225-125200611]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 125200231 125200242 FLI1 JASPAR yes 5446507
chr3 125200231 125200242 FLI1 JASPAR yes 71044509
chr3 125200232 125200245 ELF1 JASPAR yes 5446508
chr3 125200232 125200245 ELF1 JASPAR yes 71044510
chr3 125200233 125200240 SPI1 JASPAR yes 5446509
chr3 125200233 125200240 SPI1 JASPAR yes 71044511
chr3 125200233 125200241 FEV JASPAR yes 5446510
chr3 125200233 125200241 FEV JASPAR yes 71044512
chr3 125200235 125200240 ETS2 TRANSFAC yes 5446511
chr3 125200235 125200240 ETS2 TRANSFAC yes 71044513
chr3 125200247 125200253 MYC TRANSFAC yes 5446512
chr3 125200247 125200253 MYC TRANSFAC yes 71044514
chr3 125200263 125200277 MTF1 JASPAR yes 5446513
chr3 125200263 125200277 MTF1 JASPAR yes 71044515
chr3 125200285 125200306 IRF1 JASPAR yes 5446514
chr3 125200285 125200306 IRF1 JASPAR yes 71044516
chr3 125200287 125200308 IRF1 JASPAR yes 5446515
chr3 125200287 125200308 IRF1 JASPAR yes 71044517
chr3 125200288 125200303 FOXP1 JASPAR yes 5446516
chr3 125200288 125200303 FOXP1 JASPAR yes 71044518
chr3 125200288 125200309 IRF1 JASPAR yes 5446517
chr3 125200288 125200309 IRF1 JASPAR yes 71044519
chr3 125200289 125200310 IRF1 JASPAR yes 5446518
chr3 125200289 125200310 IRF1 JASPAR yes 71044520
chr3 125200290 125200305 FOXP1 JASPAR yes 5446519
chr3 125200290 125200305 FOXP1 JASPAR yes 71044521
chr3 125200291 125200306 FOXP1 JASPAR yes 5446520
chr3 125200291 125200306 FOXP1 JASPAR yes 71044522
chr3 125200292 125200307 FOXP1 JASPAR yes 5446521
chr3 125200292 125200307 FOXP1 JASPAR yes 71044523
chr3 125200293 125200308 FOXP1 JASPAR yes 5446522
chr3 125200293 125200308 FOXP1 JASPAR yes 71044524
chr3 125200294 125200309 FOXP1 JASPAR yes 5446523
chr3 125200294 125200309 FOXP1 JASPAR yes 71044525
chr3 125200295 125200310 FOXP1 JASPAR yes 5446524
chr3 125200295 125200310 FOXP1 JASPAR yes 71044526
chr3 125200296 125200311 FOXP1 JASPAR yes 5446525
chr3 125200296 125200311 FOXP1 JASPAR yes 71044527
chr3 125200297 125200312 FOXP1 JASPAR yes 5446526
chr3 125200297 125200312 FOXP1 JASPAR yes 71044528
chr3 125200311 125200329 IRF2 JASPAR yes 5446527
chr3 125200311 125200329 IRF2 JASPAR yes 71044529
chr3 125200312 125200333 IRF1 JASPAR yes 5446528
chr3 125200312 125200333 IRF1 JASPAR yes 71044530
chr3 125200316 125200331 IRF9 JASPAR yes 5446529
chr3 125200316 125200331 IRF9 JASPAR yes 71044531
chr3 125200347 125200358 CEBPA JASPAR yes 5446530
chr3 125200347 125200358 CEBPA JASPAR yes 71044532
chr3 125200347 125200359 HLF JASPAR yes 5446531
chr3 125200347 125200359 HLF JASPAR yes 71044533
chr3 125200348 125200358 CEBPB JASPAR yes 5446532
chr3 125200348 125200358 CEBPD JASPAR yes 5446533
chr3 125200348 125200358 CEBPE JASPAR yes 5446534
chr3 125200348 125200358 CEBPG JASPAR yes 5446535
chr3 125200348 125200358 CEBPB JASPAR yes 71044534
chr3 125200348 125200358 CEBPD JASPAR yes 71044535
chr3 125200348 125200358 CEBPE JASPAR yes 71044536
chr3 125200348 125200358 CEBPG JASPAR yes 71044537
chr3 125200348 125200359 CEBPB JASPAR yes 5446536
chr3 125200348 125200359 CEBPB JASPAR yes 71044538
chr3 125200360 125200377 ESR1 JASPAR yes 5446537
chr3 125200360 125200377 ESR1 JASPAR yes 71044539
chr3 125200363 125200378 RUNX2 JASPAR yes 5446538
chr3 125200363 125200378 RUNX2 JASPAR yes 71044540
chr3 125200363 125200384 ZNF263 JASPAR yes 5446539
chr3 125200363 125200384 ZNF263 JASPAR yes 71044541
chr3 125200370 125200382 HINFP JASPAR yes 5446540
chr3 125200370 125200382 HINFP JASPAR yes 71044542
chr3 125200374 125200382 SP1 TRANSFAC yes 5446541
chr3 125200374 125200382 SP1 TRANSFAC yes 71044543
chr3 125200374 125200384 SP1 JASPAR yes 5446542
chr3 125200374 125200384 SP1 JASPAR yes 71044544
chr3 125200397 125200408 E2F4 JASPAR yes 5446543
chr3 125200397 125200408 E2F6 JASPAR yes 5446544
chr3 125200397 125200408 E2F4 JASPAR yes 71044545
chr3 125200397 125200408 E2F6 JASPAR yes 71044546
chr3 125200397 125200411 E2F7 JASPAR yes 5446545
chr3 125200397 125200411 E2F7 JASPAR yes 71044547
chr3 125200398 125200405 E2F1 TRANSFAC yes 5446546
chr3 125200398 125200405 E2F1 TRANSFAC yes 71044548
chr3 125200398 125200406 E2F1 JASPAR yes 5446547
chr3 125200398 125200406 E2F1 JASPAR yes 71044549
chr3 125200398 125200409 E2F1 JASPAR yes 5446548
chr3 125200398 125200409 E2F1 JASPAR yes 71044550
chr3 125200419 125200424 GATA1 TRANSFAC yes 5446549
chr3 125200419 125200424 GATA1 TRANSFAC yes 71044551
chr3 125200425 125200433 RHOXF1 JASPAR yes 5446550
chr3 125200425 125200433 RHOXF1 JASPAR yes 71044552
chr3 125200477 125200489 YY1 JASPAR yes 5446551
chr3 125200477 125200489 YY1 JASPAR yes 71044553
chr3 125200484 125200504 PPARG JASPAR yes 5446552
chr3 125200484 125200504 PPARG JASPAR yes 71044554
chr3 125200487 125200507 ESR1 JASPAR yes 5446553
chr3 125200487 125200507 ESR1 JASPAR yes 71044555
chr3 125200488 125200492 ESR1 TRANSFAC yes 5446554
chr3 125200488 125200492 ESR1 TRANSFAC yes 71044556
chr3 125200502 125200517 NR2C2 JASPAR yes 5446555
chr3 125200502 125200517 NR2C2 JASPAR yes 71044557
chr3 125200514 125200524 SREBF2 JASPAR yes 5446556
chr3 125200514 125200524 SREBF2 JASPAR yes 71044558
chr3 125200514 125200525 USF1 JASPAR yes 5446557
chr3 125200514 125200525 USF2 JASPAR yes 5446558
chr3 125200514 125200525 USF1 JASPAR yes 71044559
chr3 125200514 125200525 USF2 JASPAR yes 71044560
chr3 125200531 125200538 E2F1 TRANSFAC yes 5446559
chr3 125200531 125200538 E2F1 TRANSFAC yes 71044561
chr3 125200562 125200573 FOSL2 JASPAR yes 5446560
chr3 125200562 125200573 FOSL2 JASPAR yes 71044562
chr3 125200575 125200593 NR3C1 JASPAR yes 5446561
chr3 125200575 125200593 NR3C1 JASPAR yes 71044563
SNP sites on vista42272[chr3:125200225-125200611]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 125200249 rs192042815 C T
MYC
7003593
chr3 125200254 rs536506178 A G no 7003594
chr3 125200291 rs35694457 CT C
FOXP1 IRF1
7003595
chr3 125200291 rs757692987 CT C
FOXP1 IRF1
7003596
chr3 125200354 rs141052877 G A
CEBPA CEBPB CEBPD CEBPE CEBPG HLF
7003597
chr3 125200370 rs2333222 A G
ESR1 HINFP RUNX2 ZNF263
7003598
chr3 125200526 rs144773609 G A no 7003599
Genes possibly regulated by vista42272[chr3:125200225-125200611]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 125165495 125239041 - SNX4 ENSG00000114520.6 125239041 0.7 0.97 4026 61570
Expression level of Genes
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miRNAs possibly regulated by vista42272[chr3:125200225-125200611]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results