EnhancerDB
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  3. vista42275[chr3:125341186-125341562]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42275[chr3:125341186-125341562]
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Tissue distribution of vista42275
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Transcription factor that possibly regulate vista42275[chr3:125341186-125341562]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 125341339 125341524 NR3C1 UCSC Txn Factor no Conserved 108530168
chr3 125341187 125341193 MZF1 JASPAR yes 5454495
chr3 125341187 125341193 MZF1 JASPAR yes 71044638
chr3 125341193 125341208 HSF1 JASPAR yes 5454496
chr3 125341193 125341208 HSF1 JASPAR yes 71044639
chr3 125341194 125341207 HSF2 JASPAR yes 5454497
chr3 125341194 125341207 HSF2 JASPAR yes 71044640
chr3 125341207 125341215 FOXL1 JASPAR yes 5454498
chr3 125341207 125341215 FOXL1 JASPAR yes 71044641
chr3 125341217 125341232 FOXA1 JASPAR yes 5454499
chr3 125341217 125341232 FOXA1 JASPAR yes 71044642
chr3 125341219 125341230 FOXP2 JASPAR yes 5454500
chr3 125341219 125341230 FOXP2 JASPAR yes 71044643
chr3 125341219 125341231 FOXC2 JASPAR yes 5454501
chr3 125341219 125341231 FOXC2 JASPAR yes 71044644
chr3 125341220 125341228 FOXD1 JASPAR yes 5454502
chr3 125341220 125341228 FOXG1 JASPAR yes 5454503
chr3 125341220 125341228 FOXO3 JASPAR yes 5454504
chr3 125341220 125341228 FOXD1 JASPAR yes 71044645
chr3 125341220 125341228 FOXG1 JASPAR yes 71044646
chr3 125341220 125341228 FOXO3 JASPAR yes 71044647
chr3 125341220 125341231 FOXB1 JASPAR yes 5454505
chr3 125341220 125341231 FOXB1 JASPAR yes 71044648
chr3 125341221 125341228 FOXD2 JASPAR yes 5454506
chr3 125341221 125341228 FOXI1 JASPAR yes 5454507
chr3 125341221 125341228 FOXL1 JASPAR yes 5454508
chr3 125341221 125341228 FOXO4 JASPAR yes 5454509
chr3 125341221 125341228 FOXO6 JASPAR yes 5454510
chr3 125341221 125341228 FOXP3 JASPAR yes 5454511
chr3 125341221 125341228 FOXD2 JASPAR yes 71044649
chr3 125341221 125341228 FOXI1 JASPAR yes 71044650
chr3 125341221 125341228 FOXL1 JASPAR yes 71044651
chr3 125341221 125341228 FOXO4 JASPAR yes 71044652
chr3 125341221 125341228 FOXO6 JASPAR yes 71044653
chr3 125341221 125341228 FOXP3 JASPAR yes 71044654
chr3 125341221 125341229 FOXO3 JASPAR yes 5454512
chr3 125341221 125341229 FOXO3 JASPAR yes 71044655
chr3 125341221 125341232 FOXA1 JASPAR yes 5454513
chr3 125341221 125341232 FOXA1 JASPAR yes 71044656
chr3 125341226 125341232 SOX10 JASPAR yes 5454514
chr3 125341226 125341232 SOX10 JASPAR yes 71044657
chr3 125341237 125341241 YY1 TRANSFAC yes 5454515
chr3 125341237 125341241 YY1 TRANSFAC yes 71044658
chr3 125341249 125341253 H1TF2 TRANSFAC yes 5454516
chr3 125341249 125341253 NFE TRANSFAC yes 5454517
chr3 125341249 125341253 SRF TRANSFAC yes 5454518
chr3 125341249 125341253 H1TF2 TRANSFAC yes 71044659
chr3 125341249 125341253 NFE TRANSFAC yes 71044660
chr3 125341249 125341253 SRF TRANSFAC yes 71044661
chr3 125341266 125341272 HiNF-A TRANSFAC yes 5454519
chr3 125341266 125341272 HiNF-A TRANSFAC yes 71044662
chr3 125341268 125341279 RUNX1 JASPAR yes 5454520
chr3 125341268 125341279 RUNX1 JASPAR yes 71044663
chr3 125341284 125341288 ESR1 TRANSFAC yes 5454521
chr3 125341284 125341288 ESR1 TRANSFAC yes 71044664
chr3 125341297 125341306 THAP1 JASPAR yes 5454522
chr3 125341297 125341306 THAP1 JASPAR yes 71044665
chr3 125341300 125341304 LFA1 TRANSFAC yes 5454523
chr3 125341300 125341304 LFA1 TRANSFAC yes 71044666
chr3 125341324 125341337 HSF1 JASPAR yes 5454524
chr3 125341324 125341337 HSF2 JASPAR yes 5454525
chr3 125341324 125341337 HSF1 JASPAR yes 71044667
chr3 125341324 125341337 HSF2 JASPAR yes 71044668
chr3 125341335 125341341 NFIC JASPAR yes 5454526
chr3 125341335 125341341 NFIC JASPAR yes 71044669
chr3 125341337 125341341 H1TF2 TRANSFAC yes 5454527
chr3 125341337 125341341 NFE TRANSFAC yes 5454528
chr3 125341337 125341341 SRF TRANSFAC yes 5454529
chr3 125341337 125341341 H1TF2 TRANSFAC yes 71044670
chr3 125341337 125341341 NFE TRANSFAC yes 71044671
chr3 125341337 125341341 SRF TRANSFAC yes 71044672
chr3 125341375 125341378 MYB TRANSFAC yes 5454530
chr3 125341375 125341378 MYB TRANSFAC yes 71044673
chr3 125341391 125341412 IRF1 JASPAR yes 5454531
chr3 125341391 125341412 IRF1 JASPAR yes 71044674
chr3 125341412 125341427 AR JASPAR yes 5454532
chr3 125341412 125341427 AR JASPAR yes 71044675
chr3 125341412 125341429 NR3C1 JASPAR yes 5454533
chr3 125341412 125341429 NR3C2 JASPAR yes 5454534
chr3 125341412 125341429 NR3C1 JASPAR yes 71044676
chr3 125341412 125341429 NR3C2 JASPAR yes 71044677
chr3 125341414 125341429 AR JASPAR yes 5454535
chr3 125341414 125341429 AR JASPAR yes 71044678
chr3 125341417 125341423 SOX10 JASPAR yes 5454536
chr3 125341417 125341423 SOX10 JASPAR yes 71044679
chr3 125341432 125341447 RFX5 JASPAR yes 5454537
chr3 125341432 125341447 RFX5 JASPAR yes 71044680
chr3 125341479 125341483 LFA1 TRANSFAC yes 5454538
chr3 125341479 125341483 LFA1 TRANSFAC yes 71044681
chr3 125341479 125341491 NHLH1 JASPAR yes 5454539
chr3 125341479 125341491 NHLH1 JASPAR yes 71044682
chr3 125341480 125341490 NHLH1 JASPAR yes 5454540
chr3 125341480 125341490 NHLH1 JASPAR yes 71044683
chr3 125341485 125341495 SREBF1 JASPAR yes 5454541
chr3 125341485 125341495 SREBF2 JASPAR yes 5454542
chr3 125341485 125341495 SREBF1 JASPAR yes 71044684
chr3 125341485 125341495 SREBF2 JASPAR yes 71044685
chr3 125341488 125341498 SP1 JASPAR yes 5454543
chr3 125341488 125341498 SP1 JASPAR yes 71044686
chr3 125341498 125341513 STAT1 JASPAR yes 5454544
chr3 125341498 125341513 STAT1 JASPAR yes 71044687
chr3 125341500 125341511 STAT1 JASPAR yes 5454545
chr3 125341500 125341511 STAT3 JASPAR yes 5454546
chr3 125341500 125341511 STAT1 JASPAR yes 71044688
chr3 125341500 125341511 STAT3 JASPAR yes 71044689
chr3 125341503 125341510 ETS1 TRANSFAC yes 5454547
chr3 125341503 125341510 ETS1 TRANSFAC yes 71044690
chr3 125341504 125341512 EHF JASPAR yes 5454548
chr3 125341504 125341512 EHF JASPAR yes 71044691
chr3 125341516 125341521 TFAP2A TRANSFAC yes 5454549
chr3 125341516 125341521 TFAP2A TRANSFAC yes 71044692
chr3 125341516 125341522 MZF1 JASPAR yes 5454550
chr3 125341516 125341522 MZF1 JASPAR yes 71044693
chr3 125341525 125341529 LFA1 TRANSFAC yes 5454551
chr3 125341525 125341529 LFA1 TRANSFAC yes 71044694
chr3 125341525 125341540 AR JASPAR yes 5454552
chr3 125341525 125341540 AR JASPAR yes 71044695
chr3 125341525 125341542 NR3C1 JASPAR yes 5454553
chr3 125341525 125341542 NR3C2 JASPAR yes 5454554
chr3 125341525 125341542 NR3C1 JASPAR yes 71044696
chr3 125341525 125341542 NR3C2 JASPAR yes 71044697
chr3 125341539 125341558 REST JASPAR yes 5454555
chr3 125341539 125341558 REST JASPAR yes 71044698
SNP sites on vista42275[chr3:125341186-125341562]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 125341303 rs530872687 G T
LFA1 THAP1
7004322
chr3 125341313 rs79360347 A C no 7004323
chr3 125341357 rs4679176 G A
NR3C1
7004324
chr3 125341360 rs533346447 C T
NR3C1
7004325
chr3 125341384 rs2979340 C A,T
NR3C1
7004326
chr3 125341393 rs73858909 T C
IRF1 NR3C1
7004327
chr3 125341448 rs115388623 A T
NR3C1
7004328
chr3 125341460 rs147250744 T A
NR3C1
7004329
chr3 125341503 rs115865728 T A
ETS1 NR3C1 STAT1 STAT3
7004330
Genes possibly regulated by vista42275[chr3:125341186-125341562]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 125247702 125313934 - OSBPL11 ENSG00000144909.7 125313934 0.66 0.99 4027 72748
Expression level of Genes
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miRNAs possibly regulated by vista42275[chr3:125341186-125341562]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results