EnhancerDB
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  3. vista42277[chr3:125363284-125363563]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42277[chr3:125363284-125363563]
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Tissue distribution of vista42277
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Transcription factor that possibly regulate vista42277[chr3:125363284-125363563]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 125363202 125363483 CEBPB UCSC Txn Factor no Conserved 108530170
chr3 125363274 125363292 RARA JASPAR yes 5455890
chr3 125363274 125363292 RARA JASPAR yes 71044758
chr3 125363278 125363293 LEF1 JASPAR yes 5455891
chr3 125363278 125363293 LEF1 JASPAR yes 71044759
chr3 125363281 125363294 NR2F1 JASPAR yes 5455892
chr3 125363281 125363294 NR2F1 JASPAR yes 71044760
chr3 125363319 125363325 TCF4 TRANSFAC yes 5455893
chr3 125363319 125363325 TCF4 TRANSFAC yes 71044761
chr3 125363327 125363338 CEBPA JASPAR yes 5455894
chr3 125363327 125363338 CEBPA JASPAR yes 71044762
chr3 125363328 125363338 CEBPB JASPAR yes 5455895
chr3 125363328 125363338 CEBPD JASPAR yes 5455896
chr3 125363328 125363338 CEBPE JASPAR yes 5455897
chr3 125363328 125363338 CEBPG JASPAR yes 5455898
chr3 125363328 125363338 CEBPB JASPAR yes 71044763
chr3 125363328 125363338 CEBPD JASPAR yes 71044764
chr3 125363328 125363338 CEBPE JASPAR yes 71044765
chr3 125363328 125363338 CEBPG JASPAR yes 71044766
chr3 125363328 125363339 CEBPB JASPAR yes 5455899
chr3 125363328 125363339 CEBPB JASPAR yes 71044767
chr3 125363337 125363340 MYB TRANSFAC yes 5455900
chr3 125363337 125363340 MYB TRANSFAC yes 71044768
chr3 125363349 125363367 SRF JASPAR yes 5455901
chr3 125363349 125363367 SRF JASPAR yes 71044769
chr3 125363350 125363362 SRF JASPAR yes 5455902
chr3 125363350 125363362 SRF JASPAR yes 71044770
chr3 125363352 125363372 RREB1 JASPAR yes 5455903
chr3 125363352 125363372 RREB1 JASPAR yes 71044771
chr3 125363355 125363359 YY1 TRANSFAC yes 5455904
chr3 125363355 125363359 YY1 TRANSFAC yes 71044772
chr3 125363377 125363380 MYB TRANSFAC yes 5455905
chr3 125363377 125363380 MYB TRANSFAC yes 71044773
chr3 125363400 125363406 NFIC JASPAR yes 5455906
chr3 125363400 125363406 NFIC JASPAR yes 71044774
chr3 125363402 125363406 H1TF2 TRANSFAC yes 5455907
chr3 125363402 125363406 NFE TRANSFAC yes 5455908
chr3 125363402 125363406 SRF TRANSFAC yes 5455909
chr3 125363402 125363406 H1TF2 TRANSFAC yes 71044775
chr3 125363402 125363406 NFE TRANSFAC yes 71044776
chr3 125363402 125363406 SRF TRANSFAC yes 71044777
chr3 125363408 125363419 FOXA1 JASPAR yes 5455910
chr3 125363408 125363419 FOXA1 JASPAR yes 71044778
chr3 125363408 125363423 FOXA1 JASPAR yes 5455911
chr3 125363408 125363423 FOXA1 JASPAR yes 71044779
chr3 125363409 125363421 FOXC2 JASPAR yes 5455912
chr3 125363409 125363421 FOXC2 JASPAR yes 71044780
chr3 125363411 125363415 ESR1 TRANSFAC yes 5455913
chr3 125363411 125363415 ESR1 TRANSFAC yes 71044781
chr3 125363415 125363431 SOX4 JASPAR yes 5455914
chr3 125363415 125363431 SOX4 JASPAR yes 71044782
chr3 125363448 125363454 MZF1 JASPAR yes 5455915
chr3 125363448 125363454 MZF1 JASPAR yes 71044783
chr3 125363482 125363486 NFE TRANSFAC yes 5455916
chr3 125363482 125363486 NFE TRANSFAC yes 71044784
chr3 125363501 125363511 SP1 JASPAR yes 5455917
chr3 125363501 125363511 SP1 JASPAR yes 71044785
SNP sites on vista42277[chr3:125363284-125363563]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 125363292 rs542384955 C T
CEBPB LEF1 NR2F1 RARA
7004486
chr3 125363299 rs369295667 AG A
CEBPB
7004487
chr3 125363456 rs76503076 G A
CEBPB
7004488
Genes possibly regulated by vista42277[chr3:125363284-125363563]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 125247702 125313934 - OSBPL11 ENSG00000144909.7 125313934 0.66 0.99 4027 50650
Expression level of Genes
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miRNAs possibly regulated by vista42277[chr3:125363284-125363563]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results