EnhancerDB
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  3. vista42279[chr3:125554978-125555354]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42279[chr3:125554978-125555354]
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Tissue distribution of vista42279
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Transcription factor that possibly regulate vista42279[chr3:125554978-125555354]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 125554986 125555000 MTF1 JASPAR yes 5462411
chr3 125554986 125555000 MTF1 JASPAR yes 71044820
chr3 125555017 125555030 ELF1 JASPAR yes 5462412
chr3 125555017 125555030 ELF1 JASPAR yes 71044821
chr3 125555018 125555030 EHF JASPAR yes 5462413
chr3 125555018 125555030 ELF1 JASPAR yes 5462414
chr3 125555018 125555030 ELF4 JASPAR yes 5462415
chr3 125555018 125555030 EHF JASPAR yes 71044822
chr3 125555018 125555030 ELF1 JASPAR yes 71044823
chr3 125555018 125555030 ELF4 JASPAR yes 71044824
chr3 125555018 125555031 ELF3 JASPAR yes 5462416
chr3 125555018 125555031 ELF3 JASPAR yes 71044825
chr3 125555019 125555030 ELF5 JASPAR yes 5462417
chr3 125555019 125555030 ELF5 JASPAR yes 71044826
chr3 125555020 125555030 ERF JASPAR yes 5462418
chr3 125555020 125555030 ETV6 JASPAR yes 5462419
chr3 125555020 125555030 ERF JASPAR yes 71044827
chr3 125555020 125555030 ETV6 JASPAR yes 71044828
chr3 125555020 125555031 FLI1 JASPAR yes 5462420
chr3 125555020 125555031 FLI1 JASPAR yes 71044829
chr3 125555021 125555029 EHF JASPAR yes 5462421
chr3 125555021 125555029 FEV JASPAR yes 5462422
chr3 125555021 125555029 EHF JASPAR yes 71044830
chr3 125555021 125555029 FEV JASPAR yes 71044831
chr3 125555022 125555029 SPI1 JASPAR yes 5462423
chr3 125555022 125555029 SPI1 JASPAR yes 71044832
chr3 125555039 125555052 ZBTB18 JASPAR yes 5462424
chr3 125555039 125555052 ZBTB18 JASPAR yes 71044833
chr3 125555041 125555051 MSC JASPAR yes 5462425
chr3 125555041 125555051 NHLH1 JASPAR yes 5462426
chr3 125555041 125555051 MSC JASPAR yes 71044834
chr3 125555041 125555051 NHLH1 JASPAR yes 71044835
chr3 125555043 125555062 RFX2 JASPAR yes 5462427
chr3 125555043 125555062 RFX2 JASPAR yes 71044836
chr3 125555045 125555060 RFX5 JASPAR yes 5462428
chr3 125555045 125555060 RFX5 JASPAR yes 71044837
chr3 125555047 125555063 RFX2 JASPAR yes 5462429
chr3 125555047 125555063 RFX3 JASPAR yes 5462430
chr3 125555047 125555063 RFX4 JASPAR yes 5462431
chr3 125555047 125555063 RFX5 JASPAR yes 5462432
chr3 125555047 125555063 RFX2 JASPAR yes 71044838
chr3 125555047 125555063 RFX3 JASPAR yes 71044839
chr3 125555047 125555063 RFX4 JASPAR yes 71044840
chr3 125555047 125555063 RFX5 JASPAR yes 71044841
chr3 125555048 125555067 RFX2 JASPAR yes 5462433
chr3 125555048 125555067 RFX2 JASPAR yes 71044842
chr3 125555057 125555070 ZBTB18 JASPAR yes 5462434
chr3 125555057 125555070 ZBTB18 JASPAR yes 71044843
chr3 125555094 125555109 MAFK JASPAR yes 5462435
chr3 125555094 125555109 MAFK JASPAR yes 71044844
chr3 125555098 125555109 NRL JASPAR yes 5462436
chr3 125555098 125555109 NRL JASPAR yes 71044845
chr3 125555114 125555124 CUX1 JASPAR yes 5462437
chr3 125555114 125555124 CUX2 JASPAR yes 5462438
chr3 125555114 125555124 CUX1 JASPAR yes 71044846
chr3 125555114 125555124 CUX2 JASPAR yes 71044847
chr3 125555117 125555135 ESR1 JASPAR yes 5462439
chr3 125555117 125555135 ESR1 JASPAR yes 71044848
chr3 125555163 125555166 MYB TRANSFAC yes 5462440
chr3 125555163 125555166 MYB TRANSFAC yes 71044849
chr3 125555163 125555179 SOX4 JASPAR yes 5462441
chr3 125555163 125555179 SOX4 JASPAR yes 71044850
chr3 125555166 125555170 YY1 TRANSFAC yes 5462442
chr3 125555166 125555170 YY1 TRANSFAC yes 71044851
chr3 125555174 125555182 MEIS2 JASPAR yes 5462443
chr3 125555174 125555182 MEIS3 JASPAR yes 5462444
chr3 125555174 125555182 MEIS2 JASPAR yes 71044852
chr3 125555174 125555182 MEIS3 JASPAR yes 71044853
chr3 125555180 125555200 TP53 JASPAR yes 5462445
chr3 125555180 125555200 TP53 JASPAR yes 71044854
chr3 125555190 125555196 TCF4 TRANSFAC yes 5462446
chr3 125555190 125555196 TCF4 TRANSFAC yes 71044855
chr3 125555206 125555214 GMEB2 JASPAR yes 5462447
chr3 125555206 125555214 GMEB2 JASPAR yes 71044856
chr3 125555215 125555221 YY1 JASPAR yes 5462448
chr3 125555215 125555221 YY1 JASPAR yes 71044857
chr3 125555223 125555230 ETS1 TRANSFAC yes 5462449
chr3 125555223 125555230 ETS1 TRANSFAC yes 71044858
chr3 125555224 125555232 EHF JASPAR yes 5462450
chr3 125555224 125555232 EHF JASPAR yes 71044859
chr3 125555237 125555245 FOXC1 JASPAR yes 5462451
chr3 125555237 125555245 FOXC1 JASPAR yes 71044860
chr3 125555239 125555249 SREBF1 JASPAR yes 5462452
chr3 125555239 125555249 SREBF1 JASPAR yes 71044861
chr3 125555261 125555267 ZNF354C JASPAR yes 5462453
chr3 125555261 125555267 ZNF354C JASPAR yes 71044862
chr3 125555267 125555273 TCF4 TRANSFAC yes 5462454
chr3 125555267 125555273 TCF4 TRANSFAC yes 71044863
chr3 125555273 125555287 TCF7L2 JASPAR yes 5462455
chr3 125555273 125555287 TCF7L2 JASPAR yes 71044864
chr3 125555273 125555288 LEF1 JASPAR yes 5462456
chr3 125555273 125555288 LEF1 JASPAR yes 71044865
chr3 125555296 125555313 ZNF410 JASPAR yes 5462457
chr3 125555296 125555313 ZNF410 JASPAR yes 71044866
chr3 125555298 125555307 THAP1 JASPAR yes 5462458
chr3 125555298 125555307 THAP1 JASPAR yes 71044867
chr3 125555300 125555315 RFX5 JASPAR yes 5462459
chr3 125555300 125555315 RFX5 JASPAR yes 71044868
chr3 125555308 125555311 MYB TRANSFAC yes 5462460
chr3 125555308 125555311 MYB TRANSFAC yes 71044869
chr3 125555311 125555329 MAFF JASPAR yes 5462461
chr3 125555311 125555329 MAFF JASPAR yes 71044870
chr3 125555313 125555328 MAFK JASPAR yes 5462462
chr3 125555313 125555328 MAFK JASPAR yes 71044871
chr3 125555313 125555334 MAFG JASPAR yes 5462463
chr3 125555313 125555334 MAFG JASPAR yes 71044872
chr3 125555314 125555328 JUN JASPAR yes 5462464
chr3 125555314 125555328 JUN JASPAR yes 71044873
chr3 125555318 125555336 MAFF JASPAR yes 5462465
chr3 125555318 125555336 MAFF JASPAR yes 71044874
chr3 125555319 125555330 NFE2L2 JASPAR yes 5462466
chr3 125555319 125555330 NFE2L2 JASPAR yes 71044875
chr3 125555319 125555334 MAFK JASPAR yes 5462467
chr3 125555319 125555334 MAFK JASPAR yes 71044876
chr3 125555344 125555364 TP53 JASPAR yes 5462468
chr3 125555344 125555364 TP53 JASPAR yes 71044877
SNP sites on vista42279[chr3:125554978-125555354]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 125555048 rs183930432 T A
MSC NHLH1 RFX2 RFX3 RFX4 RFX5 ZBTB18
7005866
chr3 125555070 rs55653239 T C
ZBTB18
7005867
chr3 125555081 rs28767177 C A,T no 7005868
chr3 125555127 rs572136240 C G
ESR1
7005869
chr3 125555142 rs541265140 C T no 7005870
chr3 125555190 rs143984783 C T
TCF4 TP53
7005871
chr3 125555274 rs187517638 G T
LEF1 TCF7L2
7005872
chr3 125555291 rs2947704 T C no 7005873
chr3 125555293 rs527861487 C T no 7005874
chr3 125555298 rs190469311 G A,T
THAP1 ZNF410
7005875
Genes possibly regulated by vista42279[chr3:125554978-125555354]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista42279[chr3:125554978-125555354]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results