EnhancerDB
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  3. vista42298[chr3:126630341-126630598]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42298[chr3:126630341-126630598]
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Tissue distribution of vista42298
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Transcription factor that possibly regulate vista42298[chr3:126630341-126630598]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 126629861 126630877 POLR2A UCSC Txn Factor no Conserved 108530196
chr3 126629861 126630877 POLR2A UCSC Txn Factor no Conserved 108530197
chr3 126630163 126630713 GATA2 UCSC Txn Factor no Conserved 108530198
chr3 126630188 126630668 RUNX3 UCSC Txn Factor no Conserved 108530199
chr3 126630240 126630654 RELA UCSC Txn Factor no Conserved 108530200
chr3 126630246 126630610 TEAD4 UCSC Txn Factor no Conserved 108530201
chr3 126630246 126630694 EP300 UCSC Txn Factor no Conserved 108530202
chr3 126630251 126630589 NR2F2 UCSC Txn Factor no Conserved 108530203
chr3 126630263 126630603 JUN UCSC Txn Factor no Conserved 108530204
chr3 126630268 126630552 TAL1 UCSC Txn Factor no Conserved 108530205
chr3 126630268 126630580 FOS UCSC Txn Factor no Conserved 108530206
chr3 126630275 126630655 NFIC UCSC Txn Factor no Conserved 108530207
chr3 126630285 126630621 JUND UCSC Txn Factor no Conserved 108530208
chr3 126630313 126630584 BATF UCSC Txn Factor no Conserved 108530209
chr3 126630322 126630568 IRF4 UCSC Txn Factor no Conserved 108530210
chr3 126630325 126630594 SPI1 UCSC Txn Factor no Conserved 108530211
chr3 126630334 126630343 RUNX2 JASPAR yes 5503560
chr3 126630334 126630343 RUNX2 JASPAR yes 71045581
chr3 126630339 126630352 JUN JASPAR yes 5503561
chr3 126630339 126630352 JUN JASPAR yes 71045582
chr3 126630394 126630399 SP1 TRANSFAC yes 5503562
chr3 126630394 126630399 SP1 TRANSFAC yes 71045583
chr3 126630394 126630414 TP63 JASPAR yes 5503563
chr3 126630394 126630414 TP63 JASPAR yes 71045584
chr3 126630395 126630400 SP1 TRANSFAC yes 5503564
chr3 126630395 126630400 SP1 TRANSFAC yes 71045585
chr3 126630399 126630403 ESR1 TRANSFAC yes 5503565
chr3 126630399 126630403 ESR1 TRANSFAC yes 71045586
chr3 126630399 126630419 TP63 JASPAR yes 5503566
chr3 126630399 126630419 TP63 JASPAR yes 71045587
chr3 126630418 126630428 REL JASPAR yes 5503567
chr3 126630418 126630428 REL JASPAR yes 71045588
chr3 126630418 126630429 NFKB1 JASPAR yes 5503568
chr3 126630418 126630429 NFKB1 JASPAR yes 71045589
chr3 126630419 126630429 NFKB1 JASPAR yes 5503569
chr3 126630419 126630429 NFKB1 JASPAR yes 71045590
chr3 126630419 126630430 NFKB1 JASPAR yes 5503570
chr3 126630419 126630430 NFKB1 JASPAR yes 71045591
chr3 126630428 126630439 FOS JASPAR yes 5503571
chr3 126630428 126630439 FOSL1 JASPAR yes 5503572
chr3 126630428 126630439 JUND JASPAR yes 5503573
chr3 126630428 126630439 FOS JASPAR yes 71045592
chr3 126630428 126630439 FOSL1 JASPAR yes 71045593
chr3 126630428 126630439 JUND JASPAR yes 71045594
chr3 126630429 126630438 JDP2 JASPAR yes 5503574
chr3 126630429 126630438 JDP2 JASPAR yes 71045595
chr3 126630429 126630440 FOSL2 JASPAR yes 5503575
chr3 126630429 126630440 JUNB JASPAR yes 5503576
chr3 126630429 126630440 FOSL2 JASPAR yes 71045596
chr3 126630429 126630440 JUNB JASPAR yes 71045597
chr3 126630429 126630443 JUN JASPAR yes 5503577
chr3 126630429 126630443 JUN JASPAR yes 71045598
chr3 126630430 126630441 BATF JASPAR yes 5503578
chr3 126630430 126630441 BATF JASPAR yes 71045599
chr3 126630436 126630447 STAT1 JASPAR yes 5503579
chr3 126630436 126630447 STAT3 JASPAR yes 5503580
chr3 126630436 126630447 STAT1 JASPAR yes 71045600
chr3 126630436 126630447 STAT3 JASPAR yes 71045601
chr3 126630444 126630453 SOX9 JASPAR yes 5503581
chr3 126630444 126630453 SOX9 JASPAR yes 71045602
chr3 126630447 126630461 SPI1 JASPAR yes 5503582
chr3 126630447 126630461 SPI1 JASPAR yes 71045603
chr3 126630451 126630458 SPIB JASPAR yes 5503583
chr3 126630451 126630458 SPIB JASPAR yes 71045604
chr3 126630451 126630462 FLI1 JASPAR yes 5503584
chr3 126630451 126630462 FLI1 JASPAR yes 71045605
chr3 126630466 126630479 NFKB1 JASPAR yes 5503585
chr3 126630466 126630479 NFKB2 JASPAR yes 5503586
chr3 126630466 126630479 NFKB1 JASPAR yes 71045606
chr3 126630466 126630479 NFKB2 JASPAR yes 71045607
chr3 126630468 126630478 EVX1 JASPAR yes 5503587
chr3 126630468 126630478 EVX2 JASPAR yes 5503588
chr3 126630468 126630478 EVX1 JASPAR yes 71045608
chr3 126630468 126630478 EVX2 JASPAR yes 71045609
chr3 126630485 126630492 E2F1 TRANSFAC yes 5503589
chr3 126630485 126630492 E2F1 TRANSFAC yes 71045610
chr3 126630486 126630501 RUNX2 JASPAR yes 5503590
chr3 126630486 126630501 RUNX2 JASPAR yes 71045611
chr3 126630497 126630508 ELK4 JASPAR yes 5503591
chr3 126630497 126630508 FLI1 JASPAR yes 5503592
chr3 126630497 126630508 ELK4 JASPAR yes 71045612
chr3 126630497 126630508 FLI1 JASPAR yes 71045613
chr3 126630498 126630508 ELK1 JASPAR yes 5503593
chr3 126630498 126630508 ELK3 JASPAR yes 5503594
chr3 126630498 126630508 ERF JASPAR yes 5503595
chr3 126630498 126630508 ERG JASPAR yes 5503596
chr3 126630498 126630508 ETS1 JASPAR yes 5503597
chr3 126630498 126630508 ETV1 JASPAR yes 5503598
chr3 126630498 126630508 ETV3 JASPAR yes 5503599
chr3 126630498 126630508 ETV4 JASPAR yes 5503600
chr3 126630498 126630508 ETV6 JASPAR yes 5503601
chr3 126630498 126630508 FEV JASPAR yes 5503602
chr3 126630498 126630508 FLI1 JASPAR yes 5503603
chr3 126630498 126630508 ELK1 JASPAR yes 71045614
chr3 126630498 126630508 ELK3 JASPAR yes 71045615
chr3 126630498 126630508 ERF JASPAR yes 71045616
chr3 126630498 126630508 ERG JASPAR yes 71045617
chr3 126630498 126630508 ETS1 JASPAR yes 71045618
chr3 126630498 126630508 ETV1 JASPAR yes 71045619
chr3 126630498 126630508 ETV3 JASPAR yes 71045620
chr3 126630498 126630508 ETV4 JASPAR yes 71045621
chr3 126630498 126630508 ETV6 JASPAR yes 71045622
chr3 126630498 126630508 FEV JASPAR yes 71045623
chr3 126630498 126630508 FLI1 JASPAR yes 71045624
chr3 126630498 126630509 ETV2 JASPAR yes 5503604
chr3 126630498 126630509 ETV2 JASPAR yes 71045625
chr3 126630498 126630510 ELF4 JASPAR yes 5503605
chr3 126630498 126630510 ELF4 JASPAR yes 71045626
chr3 126630498 126630511 ELF1 JASPAR yes 5503606
chr3 126630498 126630511 ELF1 JASPAR yes 71045627
chr3 126630499 126630506 SPI1 JASPAR yes 5503607
chr3 126630499 126630506 SPI1 JASPAR yes 71045628
chr3 126630499 126630507 EHF JASPAR yes 5503608
chr3 126630499 126630507 FEV JASPAR yes 5503609
chr3 126630499 126630507 EHF JASPAR yes 71045629
chr3 126630499 126630507 FEV JASPAR yes 71045630
chr3 126630520 126630532 TAL1 JASPAR yes 5503610
chr3 126630520 126630532 TAL1 JASPAR yes 71045631
chr3 126630521 126630531 MAX JASPAR yes 5503611
chr3 126630521 126630531 MAX JASPAR yes 71045632
chr3 126630527 126630545 ESR2 JASPAR yes 5503612
chr3 126630527 126630545 ESR2 JASPAR yes 71045633
chr3 126630561 126630565 NFE TRANSFAC yes 5503613
chr3 126630561 126630565 NFE TRANSFAC yes 71045634
chr3 126630562 126630567 GATA2 JASPAR yes 5503614
chr3 126630562 126630567 GATA2 JASPAR yes 71045635
chr3 126630576 126630581 SP1 TRANSFAC yes 5503615
chr3 126630576 126630581 SP1 TRANSFAC yes 71045636
chr3 126630592 126630606 TLX1 JASPAR yes 5503616
chr3 126630592 126630606 TLX1 JASPAR yes 71045637
SNP sites on vista42298[chr3:126630341-126630598]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 126630351 rs141240019 AT A
BATF EP300 FOS GATA2 IRF4 JUN JUND NFIC NR2F2 POLR2A RELA RUNX3 SPI1 TAL1 TEAD4
7010485
chr3 126630418 rs185677233 C T
BATF EP300 FOS GATA2 IRF4 JUN JUND NFIC NFKB1 NR2F2 POLR2A REL RELA RUNX3 SPI1 TAL1 TEAD4 TP63
7010486
Genes possibly regulated by vista42298[chr3:126630341-126630598]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 126707437 126756235 + PLXNA1 ENSG00000114554.7 126707437 0.69 1.0 4041 23161
Expression level of Genes
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miRNAs possibly regulated by vista42298[chr3:126630341-126630598]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results