EnhancerDB
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  3. vista42304[chr3:126701397-126702091]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42304[chr3:126701397-126702091]
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Tissue distribution of vista42304
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Transcription factor that possibly regulate vista42304[chr3:126701397-126702091]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 126700890 126702259 POLR2A UCSC Txn Factor no Conserved 108530212
chr3 126700890 126702259 POLR2A UCSC Txn Factor no Conserved 108530213
chr3 126701275 126702025 E2F6 UCSC Txn Factor no Conserved 108530216
chr3 126701275 126702025 E2F6 UCSC Txn Factor no Conserved 108530217
chr3 126701305 126701954 CTCF UCSC Txn Factor no Conserved 108530218
chr3 126701356 126701620 RAD21 UCSC Txn Factor no Conserved 108530219
chr3 126701432 126701441 NF-kappaB TRANSFAC yes 71045830
chr3 126701432 126701442 NFKB1 JASPAR yes 71045831
chr3 126701432 126701442 RELA JASPAR yes 71045832
chr3 126701432 126701442 REL JASPAR yes 71045833
chr3 126701432 126701443 NFKB1 JASPAR yes 71045834
chr3 126701455 126701461 MZF1 JASPAR yes 71045835
chr3 126701475 126701490 TFAP2A JASPAR yes 71045836
chr3 126701477 126701492 TFAP2C JASPAR yes 71045837
chr3 126701478 126701489 TFAP2A JASPAR yes 71045838
chr3 126701478 126701489 TFAP2B JASPAR yes 71045839
chr3 126701478 126701489 TFAP2C JASPAR yes 71045840
chr3 126701479 126701488 TFAP2A JASPAR yes 71045841
chr3 126701483 126701488 SP1 TRANSFAC yes 71045842
chr3 126701483 126701497 PLAG1 JASPAR yes 71045843
chr3 126701484 126701503 CTCF JASPAR yes 71045844
chr3 126701485 126701500 ZIC4 JASPAR yes 71045845
chr3 126701511 126701522 NRF1 JASPAR yes 71045846
chr3 126701513 126701522 SNAI2 JASPAR yes 71045847
chr3 126701513 126701523 ID4 JASPAR yes 71045848
chr3 126701513 126701523 NHLH1 JASPAR yes 71045849
chr3 126701513 126701523 TCF3 JASPAR yes 71045850
chr3 126701513 126701523 TCF4 JASPAR yes 71045851
chr3 126701518 126701527 HIC2 JASPAR yes 71045852
chr3 126701520 126701527 SP1 TRANSFAC yes 71045853
chr3 126701522 126701527 SP1 TRANSFAC yes 71045854
chr3 126701539 126701554 ZBTB33 JASPAR yes 71045855
chr3 126701542 126701553 E2F1 JASPAR yes 71045856
chr3 126701601 126701615 PLAG1 JASPAR yes 71045857
chr3 126701620 126701630 ZNF740 JASPAR yes 71045858
chr3 126701648 126701668 ESR1 JASPAR yes 71045859
chr3 126701652 126701670 ESR2 JASPAR yes 71045860
chr3 126701654 126701658 LFA1 TRANSFAC yes 71045861
chr3 126701670 126701689 REST JASPAR yes 71045862
chr3 126701672 126701687 RFX5 JASPAR yes 71045863
chr3 126701676 126701688 INSM1 JASPAR yes 71045864
chr3 126701709 126701720 NFKB1 JASPAR yes 71045865
chr3 126701715 126701727 ELF4 JASPAR yes 71045866
chr3 126701725 126701738 TFAP2A JASPAR yes 71045867
chr3 126701725 126701738 TFAP2C JASPAR yes 71045868
chr3 126701756 126701761 SP1 TRANSFAC yes 71045869
chr3 126701757 126701762 SP1 TRANSFAC yes 71045870
chr3 126701757 126701766 THAP1 JASPAR yes 71045871
chr3 126701760 126701764 LFA1 TRANSFAC yes 71045872
chr3 126701773 126701787 TCF7L2 JASPAR yes 71045873
chr3 126701788 126701800 ZBTB7A JASPAR yes 71045874
chr3 126701790 126701795 SP1 TRANSFAC yes 71045875
chr3 126701811 126701831 ESR1 JASPAR yes 71045876
chr3 126701814 126701832 ESR2 JASPAR yes 71045877
chr3 126701815 126701832 ESR1 JASPAR yes 71045878
chr3 126701816 126701831 ESR2 JASPAR yes 71045879
chr3 126701816 126701836 ESR1 JASPAR yes 71045880
chr3 126701817 126701821 LFA1 TRANSFAC yes 71045881
chr3 126701822 126701841 CTCF JASPAR yes 71045882
chr3 126701828 126701839 EBF1 JASPAR yes 71045883
chr3 126701847 126701856 SP1 TRANSFAC yes 71045884
chr3 126701848 126701854 SP1 TRANSFAC yes 71045885
chr3 126701848 126701858 SP1 JASPAR yes 71045886
chr3 126701849 126701856 SP1 TRANSFAC yes 71045887
chr3 126701850 126701855 SP1 TRANSFAC yes 71045888
chr3 126701850 126701856 SP1 TRANSFAC yes 71045889
chr3 126701850 126701857 SP1 TRANSFAC yes 71045890
chr3 126701851 126701859 WT1 TRANSFAC yes 71045891
chr3 126701853 126701862 SP1 TRANSFAC yes 71045892
chr3 126701854 126701860 SP1 TRANSFAC yes 71045893
chr3 126701854 126701864 SP1 JASPAR yes 71045894
chr3 126701855 126701862 SP1 TRANSFAC yes 71045895
chr3 126701856 126701861 SP1 TRANSFAC yes 71045896
chr3 126701856 126701862 SP1 TRANSFAC yes 71045897
chr3 126701858 126701867 SP1 TRANSFAC yes 71045898
chr3 126701859 126701865 SP1 TRANSFAC yes 71045899
chr3 126701859 126701869 SP1 JASPAR yes 71045900
chr3 126701860 126701867 SP1 TRANSFAC yes 71045901
chr3 126701861 126701866 SP1 TRANSFAC yes 71045902
chr3 126701861 126701867 SP1 TRANSFAC yes 71045903
chr3 126701861 126701868 SP1 TRANSFAC yes 71045904
chr3 126701862 126701874 TFAP2A JASPAR yes 71045905
chr3 126701862 126701874 TFAP2B JASPAR yes 71045906
chr3 126701862 126701874 TFAP2C JASPAR yes 71045907
chr3 126701862 126701877 TFAP2A JASPAR yes 71045908
chr3 126701863 126701872 TFAP2A JASPAR yes 71045909
chr3 126701864 126701873 TFAP2A JASPAR yes 71045910
chr3 126701875 126701884 SP1 TRANSFAC yes 71045911
chr3 126701876 126701881 SP1 TRANSFAC yes 71045912
chr3 126701880 126701891 NRF1 JASPAR yes 71045913
chr3 126701881 126701892 NRF1 JASPAR yes 71045914
chr3 126701882 126701890 NRF1 TRANSFAC yes 71045915
chr3 126701901 126701916 ZIC4 JASPAR yes 71045916
chr3 126701902 126701916 ZIC1 JASPAR yes 71045917
chr3 126701908 126701913 SP1 TRANSFAC yes 71045918
chr3 126701927 126701931 H4TF2 TRANSFAC yes 71045919
chr3 126701930 126701942 NHLH1 JASPAR yes 71045920
chr3 126701963 126701972 HIC2 JASPAR yes 71045921
chr3 126701966 126701970 LFA1 TRANSFAC yes 71045922
chr3 126701979 126701991 GLI2 JASPAR yes 71045923
chr3 126702022 126702027 SP1 TRANSFAC yes 71045924
chr3 126702046 126702055 TFAP2A JASPAR yes 71045925
chr3 126702048 126702063 ZIC3 JASPAR yes 71045926
chr3 126702049 126702063 ZIC1 JASPAR yes 71045927
chr3 126702052 126702057 SP1 TRANSFAC yes 71045928
chr3 126702052 126702058 SP1 TRANSFAC yes 71045929
chr3 126702055 126702069 PLAG1 JASPAR yes 71045930
chr3 126702056 126702061 SP1 TRANSFAC yes 71045931
chr3 126702056 126702068 HINFP JASPAR yes 71045932
chr3 126702068 126702079 NRF1 JASPAR yes 71045933
chr3 126702073 126702084 NRF1 JASPAR yes 71045934
chr3 126702074 126702082 SP1 TRANSFAC yes 71045935
chr3 126702078 126702083 SP1 TRANSFAC yes 71045936
SNP sites on vista42304[chr3:126701397-126702091]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 126701431 rs563436185 G A
CTCF E2F6 POLR2A RAD21
7010984
chr3 126701466 rs57871780 G A
CTCF E2F6 POLR2A RAD21
7010985
chr3 126701486 rs567187859 G T
CTCF E2F6 PLAG1 POLR2A RAD21 SP1 TFAP2A TFAP2B TFAP2C ZIC4
7010986
chr3 126701530 rs534454061 T A,C
CTCF E2F6 POLR2A RAD21
7010987
chr3 126701596 rs574398592 C A
CTCF E2F6 POLR2A RAD21
7010988
chr3 126701633 rs144024626 AAGG A
CTCF E2F6 POLR2A
7010989
chr3 126701636 rs541802417 G A
CTCF E2F6 POLR2A
7010990
chr3 126701801 rs141251182 T G
CTCF E2F6 POLR2A
7010991
chr3 126701802 rs111856163 G A
CTCF E2F6 POLR2A
7010992
chr3 126701844 rs552728716 G GCCGGCC
CTCF E2F6 POLR2A
7010993
Genes possibly regulated by vista42304[chr3:126701397-126702091]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 126707437 126756235 + PLXNA1 ENSG00000114554.7 126707437 0.69 1.0 4041 94654
Expression level of Genes
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miRNAs possibly regulated by vista42304[chr3:126701397-126702091]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results