EnhancerDB
  1. Home
  2. Enhancers
  3. vista42310[chr3:126940272-126940448]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42310[chr3:126940272-126940448]
Back to top
Tissue distribution of vista42310
Back to top
Transcription factor that possibly regulate vista42310[chr3:126940272-126940448]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 126940276 126940295 CTCF JASPAR yes 5521370
chr3 126940276 126940295 CTCF JASPAR yes 71046150
chr3 126940277 126940285 TBX15 JASPAR yes 5521371
chr3 126940277 126940285 TBX15 JASPAR yes 71046151
chr3 126940277 126940286 ZEB1 JASPAR yes 5521372
chr3 126940277 126940286 ZEB1 JASPAR yes 71046152
chr3 126940278 126940288 TCF4 JASPAR yes 5521373
chr3 126940278 126940288 TCF4 JASPAR yes 71046153
chr3 126940280 126940285 USF2 TRANSFAC yes 5521374
chr3 126940280 126940285 USF2 TRANSFAC yes 71046154
chr3 126940284 126940289 TFAP2A TRANSFAC yes 5521375
chr3 126940284 126940289 TFAP2A TRANSFAC yes 71046155
chr3 126940284 126940290 MZF1 JASPAR yes 5521376
chr3 126940284 126940290 MZF1 JASPAR yes 71046156
chr3 126940308 126940317 THAP1 JASPAR yes 5521377
chr3 126940308 126940317 THAP1 JASPAR yes 71046157
chr3 126940351 126940371 RREB1 JASPAR yes 5521378
chr3 126940351 126940371 RREB1 JASPAR yes 71046158
chr3 126940353 126940373 RREB1 JASPAR yes 5521379
chr3 126940353 126940373 RREB1 JASPAR yes 71046159
chr3 126940356 126940366 ZNF740 JASPAR yes 5521380
chr3 126940356 126940366 ZNF740 JASPAR yes 71046160
chr3 126940358 126940372 PLAG1 JASPAR yes 5521381
chr3 126940358 126940372 PLAG1 JASPAR yes 71046161
chr3 126940362 126940382 RREB1 JASPAR yes 5521382
chr3 126940362 126940382 RREB1 JASPAR yes 71046162
chr3 126940363 126940383 RREB1 JASPAR yes 5521383
chr3 126940363 126940383 RREB1 JASPAR yes 71046163
chr3 126940365 126940385 RREB1 JASPAR yes 5521384
chr3 126940365 126940385 RREB1 JASPAR yes 71046164
chr3 126940366 126940386 RREB1 JASPAR yes 5521385
chr3 126940366 126940386 RREB1 JASPAR yes 71046165
chr3 126940369 126940389 RREB1 JASPAR yes 5521386
chr3 126940369 126940389 RREB1 JASPAR yes 71046166
chr3 126940377 126940382 SP1 TRANSFAC yes 5521387
chr3 126940377 126940382 SP1 TRANSFAC yes 71046167
chr3 126940378 126940388 ZNF740 JASPAR yes 5521388
chr3 126940378 126940388 ZNF740 JASPAR yes 71046168
chr3 126940383 126940389 PEA3 TRANSFAC yes 5521389
chr3 126940383 126940389 PEA3 TRANSFAC yes 71046169
chr3 126940383 126940394 FLI1 JASPAR yes 5521390
chr3 126940383 126940394 FLI1 JASPAR yes 71046170
chr3 126940384 126940392 FEV JASPAR yes 5521391
chr3 126940384 126940392 FEV JASPAR yes 71046171
chr3 126940392 126940406 TLX1 JASPAR yes 5521392
chr3 126940392 126940406 TLX1 JASPAR yes 71046172
chr3 126940431 126940444 NR2F1 JASPAR yes 5521393
chr3 126940431 126940444 NR2F1 JASPAR yes 71046173
chr3 126940433 126940447 RXRG JASPAR yes 5521394
chr3 126940433 126940447 RXRG JASPAR yes 71046174
chr3 126940435 126940439 ESR1 TRANSFAC yes 5521395
chr3 126940435 126940439 ESR1 TRANSFAC yes 71046175
SNP sites on vista42310[chr3:126940272-126940448]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 126940341 rs113620761 G C no 7012473
chr3 126940356 rs79207312 A G
RREB1 ZNF740
7012474
chr3 126940437 rs115617520 G A
ESR1 NR2F1 RXRG
7012475
Genes possibly regulated by vista42310[chr3:126940272-126940448]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 126911974 126917025 + C3orf56 ENSG00000214324.1 126911974 0.0 0.0 4042 71702
Expression level of Genes
Back to top
miRNAs possibly regulated by vista42310[chr3:126940272-126940448]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr3 127294110 127294131 - hsa-miR-6825-3p MIMAT0027551 127309575 0.014138861612201034 0.916667 0.0 1196
Expression level of miRNAs
Back to top