EnhancerDB
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  3. vista42315[chr3:127244302-127244595]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42315[chr3:127244302-127244595]
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Tissue distribution of vista42315
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Transcription factor that possibly regulate vista42315[chr3:127244302-127244595]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 127244140 127244596 JUND UCSC Txn Factor no Conserved 108530225
chr3 127244223 127244512 FOS UCSC Txn Factor no Conserved 108530226
chr3 127244281 127244550 CEBPB UCSC Txn Factor no Conserved 108530227
chr3 127244359 127244659 NR3C1 UCSC Txn Factor no Conserved 108530228
chr3 127244298 127244308 TBX21 JASPAR yes 5530112
chr3 127244298 127244308 TBX21 JASPAR yes 71046446
chr3 127244298 127244309 TBX20 JASPAR yes 5530113
chr3 127244298 127244309 TBX2 JASPAR yes 5530114
chr3 127244298 127244309 TBX20 JASPAR yes 71046447
chr3 127244298 127244309 TBX2 JASPAR yes 71046448
chr3 127244298 127244311 EOMES JASPAR yes 5530115
chr3 127244298 127244311 EOMES JASPAR yes 71046449
chr3 127244298 127244312 JUN JASPAR yes 5530116
chr3 127244298 127244312 JUN JASPAR yes 71046450
chr3 127244299 127244307 MGA JASPAR yes 5530117
chr3 127244299 127244307 TBX15 JASPAR yes 5530118
chr3 127244299 127244307 TBX1 JASPAR yes 5530119
chr3 127244299 127244307 TBX4 JASPAR yes 5530120
chr3 127244299 127244307 TBX5 JASPAR yes 5530121
chr3 127244299 127244307 MGA JASPAR yes 71046451
chr3 127244299 127244307 TBX15 JASPAR yes 71046452
chr3 127244299 127244307 TBX1 JASPAR yes 71046453
chr3 127244299 127244307 TBX4 JASPAR yes 71046454
chr3 127244299 127244307 TBX5 JASPAR yes 71046455
chr3 127244299 127244309 TBR1 JASPAR yes 5530122
chr3 127244299 127244309 TBR1 JASPAR yes 71046456
chr3 127244302 127244313 FOS JASPAR yes 5530123
chr3 127244302 127244313 FOSL1 JASPAR yes 5530124
chr3 127244302 127244313 JUND JASPAR yes 5530125
chr3 127244302 127244313 FOS JASPAR yes 71046457
chr3 127244302 127244313 FOSL1 JASPAR yes 71046458
chr3 127244302 127244313 JUND JASPAR yes 71046459
chr3 127244303 127244314 FOSL2 JASPAR yes 5530126
chr3 127244303 127244314 JUNB JASPAR yes 5530127
chr3 127244303 127244314 FOSL2 JASPAR yes 71046460
chr3 127244303 127244314 JUNB JASPAR yes 71046461
chr3 127244303 127244317 JUN JASPAR yes 5530128
chr3 127244303 127244317 JUN JASPAR yes 71046462
chr3 127244304 127244310 JUN TRANSFAC yes 5530129
chr3 127244304 127244310 JUN TRANSFAC yes 71046463
chr3 127244307 127244317 SREBF2 JASPAR yes 5530130
chr3 127244307 127244317 SREBF2 JASPAR yes 71046464
chr3 127244316 127244320 NFE TRANSFAC yes 5530131
chr3 127244316 127244320 NFE TRANSFAC yes 71046465
chr3 127244352 127244366 JUN JASPAR yes 5530132
chr3 127244352 127244366 JUN JASPAR yes 71046466
chr3 127244355 127244366 FOSL2 JASPAR yes 5530133
chr3 127244355 127244366 JUNB JASPAR yes 5530134
chr3 127244355 127244366 FOSL2 JASPAR yes 71046467
chr3 127244355 127244366 JUNB JASPAR yes 71046468
chr3 127244356 127244367 FOS JASPAR yes 5530135
chr3 127244356 127244367 FOSL1 JASPAR yes 5530136
chr3 127244356 127244367 JUND JASPAR yes 5530137
chr3 127244356 127244367 NFE2 JASPAR yes 5530138
chr3 127244356 127244367 FOS JASPAR yes 71046469
chr3 127244356 127244367 FOSL1 JASPAR yes 71046470
chr3 127244356 127244367 JUND JASPAR yes 71046471
chr3 127244356 127244367 NFE2 JASPAR yes 71046472
chr3 127244357 127244366 JDP2 JASPAR yes 5530139
chr3 127244357 127244366 JDP2 JASPAR yes 71046473
chr3 127244357 127244368 FOSL2 JASPAR yes 5530140
chr3 127244357 127244368 JUNB JASPAR yes 5530141
chr3 127244357 127244368 FOSL2 JASPAR yes 71046474
chr3 127244357 127244368 JUNB JASPAR yes 71046475
chr3 127244357 127244371 JUN JASPAR yes 5530142
chr3 127244357 127244371 JUN JASPAR yes 71046476
chr3 127244357 127244372 MAFK JASPAR yes 5530143
chr3 127244357 127244372 MAFK JASPAR yes 71046477
chr3 127244358 127244369 BATF JASPAR yes 5530144
chr3 127244358 127244369 BATF JASPAR yes 71046478
chr3 127244394 127244405 NFE2L2 JASPAR yes 5530145
chr3 127244394 127244405 NFE2L2 JASPAR yes 71046479
chr3 127244416 127244420 H4TF2 TRANSFAC yes 5530146
chr3 127244416 127244420 H4TF2 TRANSFAC yes 71046480
chr3 127244425 127244428 MYB TRANSFAC yes 5530147
chr3 127244425 127244428 MYB TRANSFAC yes 71046481
chr3 127244425 127244434 RUNX2 JASPAR yes 5530148
chr3 127244425 127244434 RUNX2 JASPAR yes 71046482
chr3 127244425 127244436 RUNX1 JASPAR yes 5530149
chr3 127244425 127244436 RUNX1 JASPAR yes 71046483
chr3 127244428 127244443 ZIC3 JASPAR yes 5530150
chr3 127244428 127244443 ZIC4 JASPAR yes 5530151
chr3 127244428 127244443 ZIC3 JASPAR yes 71046484
chr3 127244428 127244443 ZIC4 JASPAR yes 71046485
chr3 127244429 127244443 ZIC1 JASPAR yes 5530152
chr3 127244429 127244443 ZIC1 JASPAR yes 71046486
chr3 127244432 127244443 USF1 JASPAR yes 5530153
chr3 127244432 127244443 USF2 JASPAR yes 5530154
chr3 127244432 127244443 USF1 JASPAR yes 71046487
chr3 127244432 127244443 USF2 JASPAR yes 71046488
chr3 127244440 127244450 SP1 JASPAR yes 5530155
chr3 127244440 127244450 SP1 JASPAR yes 71046489
chr3 127244450 127244455 ATF1 TRANSFAC yes 5530156
chr3 127244450 127244455 ATF1 TRANSFAC yes 71046490
chr3 127244472 127244478 NFIC JASPAR yes 5530157
chr3 127244472 127244478 NFIC JASPAR yes 71046491
chr3 127244489 127244507 ESR1 JASPAR yes 5530158
chr3 127244489 127244507 ESR2 JASPAR yes 5530159
chr3 127244489 127244507 ESR1 JASPAR yes 71046492
chr3 127244489 127244507 ESR2 JASPAR yes 71046493
chr3 127244489 127244509 PPARG JASPAR yes 5530160
chr3 127244489 127244509 PPARG JASPAR yes 71046494
chr3 127244491 127244506 ESR2 JASPAR yes 5530161
chr3 127244491 127244506 ESR2 JASPAR yes 71046495
chr3 127244491 127244511 ESR1 JASPAR yes 5530162
chr3 127244491 127244511 ESR1 JASPAR yes 71046496
chr3 127244499 127244508 HIC2 JASPAR yes 5530163
chr3 127244499 127244508 HIC2 JASPAR yes 71046497
chr3 127244504 127244516 CREB1 JASPAR yes 5530164
chr3 127244504 127244516 CREB1 JASPAR yes 71046498
chr3 127244505 127244510 ATF1 TRANSFAC yes 5530165
chr3 127244505 127244510 ATF1 TRANSFAC yes 71046499
chr3 127244525 127244537 HLF JASPAR yes 5530166
chr3 127244525 127244537 HLF JASPAR yes 71046500
chr3 127244525 127244540 JUND JASPAR yes 5530167
chr3 127244525 127244540 JUND JASPAR yes 71046501
chr3 127244590 127244605 RUNX2 JASPAR yes 5530168
chr3 127244590 127244605 RUNX2 JASPAR yes 71046502
SNP sites on vista42315[chr3:127244302-127244595]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 127244355 rs9842411 T A,G
CEBPB FOS FOSL2 JUN JUNB JUND
7013507
chr3 127244387 rs538438178 A G
CEBPB FOS JUND NR3C1
7013508
chr3 127244408 rs2594199 C T
CEBPB FOS JUND NR3C1
7013509
chr3 127244415 rs188727534 A G
CEBPB FOS JUND NR3C1
7013510
chr3 127244439 rs114064561 T A
CEBPB FOS JUND NR3C1 USF1 USF2 ZIC1 ZIC3 ZIC4
7013511
chr3 127244455 rs145912680 G A
ATF1 CEBPB FOS JUND NR3C1
7013512
chr3 127244459 rs138395407 G A
CEBPB FOS JUND NR3C1
7013513
chr3 127244488 rs111388209 C T
CEBPB FOS JUND NR3C1
7013514
chr3 127244574 rs116619877 G A
JUND NR3C1
7013515
chr3 127244577 rs111349553 C T
JUND NR3C1
7013516
Genes possibly regulated by vista42315[chr3:127244302-127244595]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 127291912 127317094 - TPRA1 ENSG00000163870.10 127317094 0.57 1.0 4043 27501
chr3 127317066 127341276 + MCM2 ENSG00000073111.9 127317066 0.94 1.0 4044 27529
Expression level of Genes
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miRNAs possibly regulated by vista42315[chr3:127244302-127244595]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr3 127294110 127294131 - hsa-miR-6825-3p MIMAT0027551 127309575 0.08582098883785293 0.916667 0.0 1196
Expression level of miRNAs
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