EnhancerDB
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  3. vista42340[chr3:127554319-127554718]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42340[chr3:127554319-127554718]
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Tissue distribution of vista42340
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Transcription factor that possibly regulate vista42340[chr3:127554319-127554718]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 127554232 127554667 RELA UCSC Txn Factor no Conserved 108530268
chr3 127554325 127554650 RUNX3 UCSC Txn Factor no Conserved 108530269
chr3 127554310 127554326 GLIS1 JASPAR yes 5553296
chr3 127554310 127554326 GLIS1 JASPAR yes 71047990
chr3 127554316 127554327 FOSL2 JASPAR yes 5553297
chr3 127554316 127554327 FOSL2 JASPAR yes 71047991
chr3 127554317 127554322 SP1 TRANSFAC yes 5553298
chr3 127554317 127554322 SP1 TRANSFAC yes 71047992
chr3 127554319 127554325 ESR1 TRANSFAC yes 5553299
chr3 127554319 127554325 ESR1 TRANSFAC yes 71047993
chr3 127554321 127554325 ESR1 TRANSFAC yes 5553300
chr3 127554321 127554325 ESR1 TRANSFAC yes 71047994
chr3 127554325 127554338 ZBTB18 JASPAR yes 5553301
chr3 127554325 127554338 ZBTB18 JASPAR yes 71047995
chr3 127554327 127554337 MAX JASPAR yes 5553302
chr3 127554327 127554337 MAX JASPAR yes 71047996
chr3 127554333 127554338 GATA1 TRANSFAC yes 5553303
chr3 127554333 127554338 GATA1 TRANSFAC yes 71047997
chr3 127554338 127554356 NR3C1 JASPAR yes 5553304
chr3 127554338 127554356 NR3C1 JASPAR yes 71047998
chr3 127554345 127554357 MEF2D JASPAR yes 5553305
chr3 127554345 127554357 MEF2D JASPAR yes 71047999
chr3 127554347 127554351 YY1 TRANSFAC yes 5553306
chr3 127554347 127554351 YY1 TRANSFAC yes 71048000
chr3 127554375 127554386 CEBPA JASPAR yes 5553307
chr3 127554375 127554386 CEBPA JASPAR yes 71048001
chr3 127554384 127554404 PPARG JASPAR yes 5553308
chr3 127554384 127554404 PPARG JASPAR yes 71048002
chr3 127554387 127554398 ESRRA JASPAR yes 5553309
chr3 127554387 127554398 ESRRB JASPAR yes 5553310
chr3 127554387 127554398 ESRRA JASPAR yes 71048003
chr3 127554387 127554398 ESRRB JASPAR yes 71048004
chr3 127554391 127554404 NR2F1 JASPAR yes 5553311
chr3 127554391 127554404 NR2F1 JASPAR yes 71048005
chr3 127554394 127554407 JUN JASPAR yes 5553312
chr3 127554394 127554407 JUN JASPAR yes 71048006
chr3 127554395 127554403 CREB1 JASPAR yes 5553313
chr3 127554395 127554403 CREB1 JASPAR yes 71048007
chr3 127554395 127554405 RORA JASPAR yes 5553314
chr3 127554395 127554405 RORA JASPAR yes 71048008
chr3 127554404 127554422 IRF2 JASPAR yes 5553315
chr3 127554404 127554422 IRF2 JASPAR yes 71048009
chr3 127554409 127554420 CEBPB JASPAR yes 5553316
chr3 127554409 127554420 CEBPB JASPAR yes 71048010
chr3 127554410 127554421 CEBPA JASPAR yes 5553317
chr3 127554410 127554421 CEBPA JASPAR yes 71048011
chr3 127554414 127554428 TCF7L2 JASPAR yes 5553318
chr3 127554414 127554428 TCF7L2 JASPAR yes 71048012
chr3 127554414 127554429 LEF1 JASPAR yes 5553319
chr3 127554414 127554429 LEF1 JASPAR yes 71048013
chr3 127554420 127554434 POU1F1 JASPAR yes 5553320
chr3 127554420 127554434 POU1F1 JASPAR yes 71048014
chr3 127554421 127554434 POU2F2 JASPAR yes 5553321
chr3 127554421 127554434 POU2F2 JASPAR yes 71048015
chr3 127554426 127554440 SPIC JASPAR yes 5553322
chr3 127554426 127554440 SPIC JASPAR yes 71048016
chr3 127554441 127554453 FOXI1 JASPAR yes 5553323
chr3 127554441 127554453 FOXI1 JASPAR yes 71048017
chr3 127554442 127554450 FOXL1 JASPAR yes 5553324
chr3 127554442 127554450 FOXL1 JASPAR yes 71048018
chr3 127554446 127554460 E2F7 JASPAR yes 5553325
chr3 127554446 127554460 E2F7 JASPAR yes 71048019
chr3 127554450 127554455 SP1 TRANSFAC yes 5553326
chr3 127554450 127554455 SP1 TRANSFAC yes 71048020
chr3 127554450 127554465 HNF4G JASPAR yes 5553327
chr3 127554450 127554465 HNF4G JASPAR yes 71048021
chr3 127554452 127554457 TFAP2A TRANSFAC yes 5553328
chr3 127554452 127554457 TFAP2A TRANSFAC yes 71048022
chr3 127554452 127554458 MZF1 JASPAR yes 5553329
chr3 127554452 127554458 MZF1 JASPAR yes 71048023
chr3 127554454 127554464 NFKB1 JASPAR yes 5553330
chr3 127554454 127554464 NFKB1 JASPAR yes 71048024
chr3 127554454 127554465 NFKB1 JASPAR yes 5553331
chr3 127554454 127554465 NFKB1 JASPAR yes 71048025
chr3 127554455 127554465 RELA JASPAR yes 5553332
chr3 127554455 127554465 REL JASPAR yes 5553333
chr3 127554455 127554465 RELA JASPAR yes 71048026
chr3 127554455 127554465 REL JASPAR yes 71048027
chr3 127554478 127554481 MYB TRANSFAC yes 5553334
chr3 127554478 127554481 MYB TRANSFAC yes 71048028
chr3 127554498 127554506 FOXL1 JASPAR yes 5553335
chr3 127554498 127554506 FOXL1 JASPAR yes 71048029
chr3 127554508 127554512 YY1 TRANSFAC yes 5553336
chr3 127554508 127554512 YY1 TRANSFAC yes 71048030
chr3 127554508 127554523 STAT1 JASPAR yes 5553337
chr3 127554508 127554523 STAT1 JASPAR yes 71048031
chr3 127554536 127554541 TFAP2A TRANSFAC yes 5553338
chr3 127554536 127554541 TFAP2A TRANSFAC yes 71048032
chr3 127554536 127554542 MZF1 JASPAR yes 5553339
chr3 127554536 127554542 MZF1 JASPAR yes 71048033
chr3 127554538 127554544 MAZ TRANSFAC yes 5553340
chr3 127554538 127554544 MAZ TRANSFAC yes 71048034
chr3 127554538 127554549 E2F6 JASPAR yes 5553341
chr3 127554538 127554549 E2F6 JASPAR yes 71048035
chr3 127554542 127554547 ETS2 TRANSFAC yes 5553342
chr3 127554542 127554547 ETS2 TRANSFAC yes 71048036
chr3 127554564 127554572 FOXO3 JASPAR yes 5553343
chr3 127554564 127554572 FOXO3 JASPAR yes 71048037
chr3 127554576 127554580 YY1 TRANSFAC yes 5553344
chr3 127554576 127554580 YY1 TRANSFAC yes 71048038
chr3 127554578 127554598 RREB1 JASPAR yes 5553345
chr3 127554578 127554598 RREB1 JASPAR yes 71048039
chr3 127554580 127554600 RREB1 JASPAR yes 5553346
chr3 127554580 127554600 RREB1 JASPAR yes 71048040
chr3 127554582 127554602 RREB1 JASPAR yes 5553347
chr3 127554582 127554602 RREB1 JASPAR yes 71048041
chr3 127554584 127554604 RREB1 JASPAR yes 5553348
chr3 127554584 127554604 RREB1 JASPAR yes 71048042
chr3 127554586 127554606 RREB1 JASPAR yes 5553349
chr3 127554586 127554606 RREB1 JASPAR yes 71048043
chr3 127554588 127554608 RREB1 JASPAR yes 5553350
chr3 127554588 127554608 RREB1 JASPAR yes 71048044
chr3 127554590 127554610 RREB1 JASPAR yes 5553351
chr3 127554590 127554610 RREB1 JASPAR yes 71048045
chr3 127554592 127554612 RREB1 JASPAR yes 5553352
chr3 127554592 127554612 RREB1 JASPAR yes 71048046
chr3 127554594 127554614 RREB1 JASPAR yes 5553353
chr3 127554594 127554614 RREB1 JASPAR yes 71048047
chr3 127554596 127554616 RREB1 JASPAR yes 5553354
chr3 127554596 127554616 RREB1 JASPAR yes 71048048
chr3 127554598 127554618 RREB1 JASPAR yes 5553355
chr3 127554598 127554618 RREB1 JASPAR yes 71048049
chr3 127554600 127554620 RREB1 JASPAR yes 5553356
chr3 127554600 127554620 RREB1 JASPAR yes 71048050
chr3 127554602 127554622 RREB1 JASPAR yes 5553357
chr3 127554602 127554622 RREB1 JASPAR yes 71048051
chr3 127554604 127554624 RREB1 JASPAR yes 5553358
chr3 127554604 127554624 RREB1 JASPAR yes 71048052
chr3 127554606 127554626 RREB1 JASPAR yes 5553359
chr3 127554606 127554626 RREB1 JASPAR yes 71048053
chr3 127554609 127554629 RREB1 JASPAR yes 5553360
chr3 127554609 127554629 RREB1 JASPAR yes 71048054
chr3 127554614 127554634 RREB1 JASPAR yes 5553361
chr3 127554614 127554634 RREB1 JASPAR yes 71048055
chr3 127554616 127554636 RREB1 JASPAR yes 5553362
chr3 127554616 127554636 RREB1 JASPAR yes 71048056
chr3 127554618 127554628 SP1 JASPAR yes 5553363
chr3 127554618 127554628 SP1 JASPAR yes 71048057
chr3 127554619 127554639 RREB1 JASPAR yes 5553364
chr3 127554619 127554639 RREB1 JASPAR yes 71048058
chr3 127554620 127554625 SP1 TRANSFAC yes 5553365
chr3 127554620 127554625 SP1 TRANSFAC yes 71048059
chr3 127554620 127554640 RREB1 JASPAR yes 5553366
chr3 127554620 127554640 RREB1 JASPAR yes 71048060
chr3 127554621 127554626 SP1 TRANSFAC yes 5553367
chr3 127554621 127554626 SP1 TRANSFAC yes 71048061
chr3 127554621 127554627 SP1 TRANSFAC yes 5553368
chr3 127554621 127554627 SP1 TRANSFAC yes 71048062
chr3 127554623 127554643 RREB1 JASPAR yes 5553369
chr3 127554623 127554643 RREB1 JASPAR yes 71048063
chr3 127554624 127554634 SP1 JASPAR yes 5553370
chr3 127554624 127554634 SP1 JASPAR yes 71048064
chr3 127554627 127554632 SP1 TRANSFAC yes 5553371
chr3 127554627 127554632 SP1 TRANSFAC yes 71048065
chr3 127554627 127554647 RREB1 JASPAR yes 5553372
chr3 127554627 127554647 RREB1 JASPAR yes 71048066
chr3 127554631 127554636 SP1 TRANSFAC yes 5553373
chr3 127554631 127554636 SP1 TRANSFAC yes 71048067
chr3 127554639 127554654 FOXP1 JASPAR yes 5553374
chr3 127554639 127554654 FOXP1 JASPAR yes 71048068
chr3 127554647 127554657 GSX2 JASPAR yes 5553375
chr3 127554647 127554657 HESX1 JASPAR yes 5553376
chr3 127554647 127554657 LBX2 JASPAR yes 5553377
chr3 127554647 127554657 MIXL1 JASPAR yes 5553378
chr3 127554647 127554657 MNX1 JASPAR yes 5553379
chr3 127554647 127554657 RAX JASPAR yes 5553380
chr3 127554647 127554657 GSX2 JASPAR yes 71048069
chr3 127554647 127554657 HESX1 JASPAR yes 71048070
chr3 127554647 127554657 LBX2 JASPAR yes 71048071
chr3 127554647 127554657 MIXL1 JASPAR yes 71048072
chr3 127554647 127554657 MNX1 JASPAR yes 71048073
chr3 127554647 127554657 RAX JASPAR yes 71048074
chr3 127554648 127554656 ISX JASPAR yes 5553381
chr3 127554648 127554656 LHX9 JASPAR yes 5553382
chr3 127554648 127554656 LMX1B JASPAR yes 5553383
chr3 127554648 127554656 PRRX1 JASPAR yes 5553384
chr3 127554648 127554656 RAX2 JASPAR yes 5553385
chr3 127554648 127554656 SHOX JASPAR yes 5553386
chr3 127554648 127554656 UNCX JASPAR yes 5553387
chr3 127554648 127554656 ISX JASPAR yes 71048075
chr3 127554648 127554656 LHX9 JASPAR yes 71048076
chr3 127554648 127554656 LMX1B JASPAR yes 71048077
chr3 127554648 127554656 PRRX1 JASPAR yes 71048078
chr3 127554648 127554656 RAX2 JASPAR yes 71048079
chr3 127554648 127554656 SHOX JASPAR yes 71048080
chr3 127554648 127554656 UNCX JASPAR yes 71048081
chr3 127554662 127554669 JUN TRANSFAC yes 5553388
chr3 127554662 127554669 JUN TRANSFAC yes 71048082
chr3 127554688 127554698 HMBOX1 JASPAR yes 5553389
chr3 127554688 127554698 HMBOX1 JASPAR yes 71048083
chr3 127554703 127554717 NR2F1 JASPAR yes 5553390
chr3 127554703 127554717 NR2F1 JASPAR yes 71048084
SNP sites on vista42340[chr3:127554319-127554718]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 127554558 rs73862368 C A
RELA RUNX3
7015871
chr3 127554681 rs77642986 C T no 7015872
chr3 127554712 rs541793207 G A
NR2F1
7015873
chr3 127554713 rs143683345 G A,T
NR2F1
7015874
chr3 127554714 rs75990935 A G
NR2F1
7015875
Genes possibly regulated by vista42340[chr3:127554319-127554718]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 127407909 127542051 - MGLL ENSG00000074416.9 127542051 0.85 0.99 4047 87732
chr3 127634075 127706514 + KBTBD12 ENSG00000187715.9 127634075 0.93 0.0 4048 20643
Expression level of Genes
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miRNAs possibly regulated by vista42340[chr3:127554319-127554718]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results