EnhancerDB
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  3. vista42341[chr3:127555901-127556268]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42341[chr3:127555901-127556268]
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Tissue distribution of vista42341
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Transcription factor that possibly regulate vista42341[chr3:127555901-127556268]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 127555907 127555922 HNF4A JASPAR yes 5553533
chr3 127555907 127555922 HNF4A JASPAR yes 71048085
chr3 127555918 127555923 MYB TRANSFAC yes 5553534
chr3 127555918 127555923 MYB TRANSFAC yes 71048086
chr3 127555946 127555961 TP53 JASPAR yes 5553535
chr3 127555946 127555961 TP53 JASPAR yes 71048087
chr3 127555966 127555979 ELF1 JASPAR yes 5553536
chr3 127555966 127555979 ELF1 JASPAR yes 71048088
chr3 127555967 127555980 ELF3 JASPAR yes 5553537
chr3 127555967 127555980 ELF3 JASPAR yes 71048089
chr3 127555968 127555979 ELF5 JASPAR yes 5553538
chr3 127555968 127555979 ELF5 JASPAR yes 71048090
chr3 127555969 127555980 FLI1 JASPAR yes 5553539
chr3 127555969 127555980 FLI1 JASPAR yes 71048091
chr3 127555972 127555993 ZNF263 JASPAR yes 5553540
chr3 127555972 127555993 ZNF263 JASPAR yes 71048092
chr3 127555974 127555988 SPIC JASPAR yes 5553541
chr3 127555974 127555988 SPIC JASPAR yes 71048093
chr3 127556006 127556011 MYC TRANSFAC yes 5553542
chr3 127556006 127556011 MYC TRANSFAC yes 71048094
chr3 127556007 127556016 HIC2 JASPAR yes 5553543
chr3 127556007 127556016 HIC2 JASPAR yes 71048095
chr3 127556007 127556017 NFIA JASPAR yes 5553544
chr3 127556007 127556017 NFIA JASPAR yes 71048096
chr3 127556008 127556017 NFIX JASPAR yes 5553545
chr3 127556008 127556017 NFIX JASPAR yes 71048097
chr3 127556009 127556015 NFIC JASPAR yes 5553546
chr3 127556009 127556015 NFIC JASPAR yes 71048098
chr3 127556016 127556021 MYB TRANSFAC yes 5553547
chr3 127556016 127556021 MYB TRANSFAC yes 71048099
chr3 127556030 127556044 PLAG1 JASPAR yes 5553548
chr3 127556030 127556044 PLAG1 JASPAR yes 71048100
chr3 127556032 127556036 LFA1 TRANSFAC yes 5553549
chr3 127556032 127556036 LFA1 TRANSFAC yes 71048101
chr3 127556053 127556070 NR3C2 JASPAR yes 5553550
chr3 127556053 127556070 NR3C2 JASPAR yes 71048102
chr3 127556057 127556069 TAL1 JASPAR yes 5553551
chr3 127556057 127556069 TAL1 JASPAR yes 71048103
chr3 127556082 127556103 IRF1 JASPAR yes 5553552
chr3 127556082 127556103 IRF1 JASPAR yes 71048104
chr3 127556084 127556099 IRF9 JASPAR yes 5553553
chr3 127556084 127556099 IRF9 JASPAR yes 71048105
chr3 127556085 127556099 IRF7 JASPAR yes 5553554
chr3 127556085 127556099 IRF8 JASPAR yes 5553555
chr3 127556085 127556099 IRF7 JASPAR yes 71048106
chr3 127556085 127556099 IRF8 JASPAR yes 71048107
chr3 127556086 127556100 STAT1 JASPAR yes 5553556
chr3 127556086 127556100 STAT1 JASPAR yes 71048108
chr3 127556087 127556099 IRF1 JASPAR yes 5553557
chr3 127556087 127556099 IRF1 JASPAR yes 71048109
chr3 127556092 127556113 IRF1 JASPAR yes 5553558
chr3 127556092 127556113 IRF1 JASPAR yes 71048110
chr3 127556098 127556119 IRF1 JASPAR yes 5553559
chr3 127556098 127556119 IRF1 JASPAR yes 71048111
chr3 127556100 127556115 IRF9 JASPAR yes 5553560
chr3 127556100 127556115 IRF9 JASPAR yes 71048112
chr3 127556101 127556115 IRF7 JASPAR yes 5553561
chr3 127556101 127556115 IRF8 JASPAR yes 5553562
chr3 127556101 127556115 IRF7 JASPAR yes 71048113
chr3 127556101 127556115 IRF8 JASPAR yes 71048114
chr3 127556102 127556116 STAT1 JASPAR yes 5553563
chr3 127556102 127556116 STAT1 JASPAR yes 71048115
chr3 127556102 127556117 STAT2 JASPAR yes 5553564
chr3 127556102 127556117 STAT2 JASPAR yes 71048116
chr3 127556103 127556115 IRF1 JASPAR yes 5553565
chr3 127556103 127556115 IRF1 JASPAR yes 71048117
chr3 127556104 127556125 IRF1 JASPAR yes 5553566
chr3 127556104 127556125 IRF1 JASPAR yes 71048118
chr3 127556108 127556122 SPIC JASPAR yes 5553567
chr3 127556108 127556122 SPIC JASPAR yes 71048119
chr3 127556112 127556119 SPIB JASPAR yes 5553568
chr3 127556112 127556119 SPIB JASPAR yes 71048120
chr3 127556115 127556123 FOXO3 JASPAR yes 5553569
chr3 127556115 127556123 FOXO3 JASPAR yes 71048121
chr3 127556142 127556158 NFYA JASPAR yes 5553570
chr3 127556142 127556158 NFYA JASPAR yes 71048122
chr3 127556147 127556151 H1TF2 TRANSFAC yes 5553571
chr3 127556147 127556151 NFE TRANSFAC yes 5553572
chr3 127556147 127556151 SRF TRANSFAC yes 5553573
chr3 127556147 127556151 H1TF2 TRANSFAC yes 71048123
chr3 127556147 127556151 NFE TRANSFAC yes 71048124
chr3 127556147 127556151 SRF TRANSFAC yes 71048125
chr3 127556152 127556156 ESR1 TRANSFAC yes 5553574
chr3 127556152 127556156 ESR1 TRANSFAC yes 71048126
chr3 127556168 127556185 BCL6B JASPAR yes 5553575
chr3 127556168 127556185 BCL6B JASPAR yes 71048127
chr3 127556182 127556203 IRF1 JASPAR yes 5553576
chr3 127556182 127556203 IRF1 JASPAR yes 71048128
chr3 127556184 127556199 IRF9 JASPAR yes 5553577
chr3 127556184 127556199 IRF9 JASPAR yes 71048129
chr3 127556185 127556199 IRF7 JASPAR yes 5553578
chr3 127556185 127556199 IRF8 JASPAR yes 5553579
chr3 127556185 127556199 IRF7 JASPAR yes 71048130
chr3 127556185 127556199 IRF8 JASPAR yes 71048131
chr3 127556186 127556201 PRDM1 JASPAR yes 5553580
chr3 127556186 127556201 STAT2 JASPAR yes 5553581
chr3 127556186 127556201 PRDM1 JASPAR yes 71048132
chr3 127556186 127556201 STAT2 JASPAR yes 71048133
chr3 127556186 127556204 IRF2 JASPAR yes 5553582
chr3 127556186 127556204 IRF2 JASPAR yes 71048134
chr3 127556187 127556199 IRF1 JASPAR yes 5553583
chr3 127556187 127556199 IRF1 JASPAR yes 71048135
chr3 127556188 127556209 IRF1 JASPAR yes 5553584
chr3 127556188 127556209 IRF1 JASPAR yes 71048136
chr3 127556202 127556211 SRY JASPAR yes 5553585
chr3 127556202 127556211 SRY JASPAR yes 71048137
chr3 127556204 127556212 FOXO3 JASPAR yes 5553586
chr3 127556204 127556212 FOXO3 JASPAR yes 71048138
chr3 127556206 127556221 HSF1 JASPAR yes 5553587
chr3 127556206 127556221 HSF1 JASPAR yes 71048139
chr3 127556220 127556239 CTCF JASPAR yes 5553588
chr3 127556220 127556239 CTCF JASPAR yes 71048140
chr3 127556235 127556248 HNF1B JASPAR yes 5553589
chr3 127556235 127556248 HNF1B JASPAR yes 71048141
chr3 127556241 127556245 YY1 TRANSFAC yes 5553590
chr3 127556241 127556245 YY1 TRANSFAC yes 71048142
SNP sites on vista42341[chr3:127555901-127556268]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 127555922 rs75613814 G A
HNF4A MYB
7015890
chr3 127556007 rs185403771 C A
HIC2 MYC NFIA
7015891
chr3 127556010 rs138001792 T C
HIC2 MYC NFIA NFIC NFIX
7015892
chr3 127556018 rs149488145 T C
MYB
7015893
chr3 127556185 rs111235438 C T
BCL6B IRF1 IRF7 IRF8 IRF9
7015894
Genes possibly regulated by vista42341[chr3:127555901-127556268]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 127407909 127542051 - MGLL ENSG00000074416.9 127542051 0.85 0.99 4047 86150
chr3 127634075 127706514 + KBTBD12 ENSG00000187715.9 127634075 0.93 0.0 4048 22193
Expression level of Genes
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miRNAs possibly regulated by vista42341[chr3:127555901-127556268]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results