EnhancerDB
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  3. vista42342[chr3:127605255-127605518]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42342[chr3:127605255-127605518]
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Tissue distribution of vista42342
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Transcription factor that possibly regulate vista42342[chr3:127605255-127605518]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 127605255 127605271 SRF JASPAR yes 5555844
chr3 127605255 127605271 SRF JASPAR yes 71048143
chr3 127605263 127605278 HNF4G JASPAR yes 5555845
chr3 127605263 127605278 HNF4G JASPAR yes 71048144
chr3 127605264 127605279 HNF4A JASPAR yes 5555846
chr3 127605264 127605279 HNF4A JASPAR yes 71048145
chr3 127605279 127605290 USF1 JASPAR yes 5555847
chr3 127605279 127605290 USF1 JASPAR yes 71048146
chr3 127605280 127605290 TFE3 JASPAR yes 5555848
chr3 127605280 127605290 TFEB JASPAR yes 5555849
chr3 127605280 127605290 TFE3 JASPAR yes 71048147
chr3 127605280 127605290 TFEB JASPAR yes 71048148
chr3 127605280 127605291 USF2 JASPAR yes 5555850
chr3 127605280 127605291 USF2 JASPAR yes 71048149
chr3 127605282 127605293 GCM1 JASPAR yes 5555851
chr3 127605282 127605293 GCM1 JASPAR yes 71048150
chr3 127605284 127605293 HIC2 JASPAR yes 5555852
chr3 127605284 127605293 HIC2 JASPAR yes 71048151
chr3 127605287 127605291 LFA1 TRANSFAC yes 5555853
chr3 127605287 127605291 LFA1 TRANSFAC yes 71048152
chr3 127605287 127605301 TLX1 JASPAR yes 5555854
chr3 127605287 127605301 TLX1 JASPAR yes 71048153
chr3 127605298 127605302 YY1 TRANSFAC yes 5555855
chr3 127605298 127605302 YY1 TRANSFAC yes 71048154
chr3 127605304 127605310 SOX10 JASPAR yes 5555856
chr3 127605304 127605310 SOX10 JASPAR yes 71048155
chr3 127605313 127605319 NFE2 TRANSFAC yes 5555857
chr3 127605313 127605319 NFE2 TRANSFAC yes 71048156
chr3 127605340 127605355 PRDM1 JASPAR yes 5555858
chr3 127605340 127605355 PRDM1 JASPAR yes 71048157
chr3 127605347 127605353 LEF1 TRANSFAC yes 5555859
chr3 127605347 127605353 SOX10 JASPAR yes 5555860
chr3 127605347 127605353 LEF1 TRANSFAC yes 71048158
chr3 127605347 127605353 SOX10 JASPAR yes 71048159
chr3 127605389 127605393 H1TF2 TRANSFAC yes 5555861
chr3 127605389 127605393 NFE TRANSFAC yes 5555862
chr3 127605389 127605393 SRF TRANSFAC yes 5555863
chr3 127605389 127605393 H1TF2 TRANSFAC yes 71048160
chr3 127605389 127605393 NFE TRANSFAC yes 71048161
chr3 127605389 127605393 SRF TRANSFAC yes 71048162
chr3 127605398 127605409 RUNX1 JASPAR yes 5555864
chr3 127605398 127605409 RUNX1 JASPAR yes 71048163
chr3 127605410 127605429 CTCF JASPAR yes 5555865
chr3 127605410 127605429 CTCF JASPAR yes 71048164
chr3 127605411 127605419 MEIS2 JASPAR yes 5555866
chr3 127605411 127605419 MEIS3 JASPAR yes 5555867
chr3 127605411 127605419 MEIS2 JASPAR yes 71048165
chr3 127605411 127605419 MEIS3 JASPAR yes 71048166
chr3 127605412 127605416 NFE TRANSFAC yes 5555868
chr3 127605412 127605416 NFE TRANSFAC yes 71048167
chr3 127605416 127605427 ELK4 JASPAR yes 5555869
chr3 127605416 127605427 ELK4 JASPAR yes 71048168
chr3 127605416 127605429 ELF3 JASPAR yes 5555870
chr3 127605416 127605429 ELF3 JASPAR yes 71048169
chr3 127605417 127605427 GABPA JASPAR yes 5555871
chr3 127605417 127605427 GABPA JASPAR yes 71048170
chr3 127605417 127605428 ELF5 JASPAR yes 5555872
chr3 127605417 127605428 ELF5 JASPAR yes 71048171
chr3 127605419 127605425 ETS1 JASPAR yes 5555873
chr3 127605419 127605425 SPI1 JASPAR yes 5555874
chr3 127605419 127605425 ETS1 JASPAR yes 71048172
chr3 127605419 127605425 SPI1 JASPAR yes 71048173
chr3 127605419 127605429 ELK1 JASPAR yes 5555875
chr3 127605419 127605429 ELK1 JASPAR yes 71048174
chr3 127605439 127605458 RFX2 JASPAR yes 5555876
chr3 127605439 127605458 RFX2 JASPAR yes 71048175
chr3 127605441 127605456 RFX5 JASPAR yes 5555877
chr3 127605441 127605456 RFX5 JASPAR yes 71048176
chr3 127605449 127605452 MYB TRANSFAC yes 5555878
chr3 127605449 127605452 MYB TRANSFAC yes 71048177
chr3 127605464 127605474 REL JASPAR yes 5555879
chr3 127605464 127605474 REL JASPAR yes 71048178
chr3 127605478 127605491 POU2F2 JASPAR yes 5555880
chr3 127605478 127605491 POU2F2 JASPAR yes 71048179
chr3 127605478 127605492 POU1F1 JASPAR yes 5555881
chr3 127605478 127605492 POU1F1 JASPAR yes 71048180
chr3 127605479 127605491 POU3F1 JASPAR yes 5555882
chr3 127605479 127605491 POU3F2 JASPAR yes 5555883
chr3 127605479 127605491 POU3F1 JASPAR yes 71048181
chr3 127605479 127605491 POU3F2 JASPAR yes 71048182
chr3 127605479 127605492 POU3F3 JASPAR yes 5555884
chr3 127605479 127605492 POU3F3 JASPAR yes 71048183
chr3 127605480 127605492 POU2F1 JASPAR yes 5555885
chr3 127605480 127605492 POU2F1 JASPAR yes 71048184
chr3 127605481 127605488 POU2F1 TRANSFAC yes 5555886
chr3 127605481 127605488 POU2F2C TRANSFAC yes 5555887
chr3 127605481 127605488 POU2F2 TRANSFAC yes 5555888
chr3 127605481 127605488 POU2F1 TRANSFAC yes 71048185
chr3 127605481 127605488 POU2F2C TRANSFAC yes 71048186
chr3 127605481 127605488 POU2F2 TRANSFAC yes 71048187
chr3 127605481 127605489 POU2F1 TRANSFAC yes 5555889
chr3 127605481 127605489 POU2F1 TRANSFAC yes 71048188
chr3 127605481 127605490 POU3F4 JASPAR yes 5555890
chr3 127605481 127605490 POU5F1B JASPAR yes 5555891
chr3 127605481 127605490 POU3F4 JASPAR yes 71048189
chr3 127605481 127605490 POU5F1B JASPAR yes 71048190
chr3 127605492 127605508 SOX4 JASPAR yes 5555892
chr3 127605492 127605508 SOX4 JASPAR yes 71048191
chr3 127605496 127605508 HES5 JASPAR yes 5555893
chr3 127605496 127605508 HES7 JASPAR yes 5555894
chr3 127605496 127605508 HES5 JASPAR yes 71048192
chr3 127605496 127605508 HES7 JASPAR yes 71048193
chr3 127605497 127605507 BHLHE40 JASPAR yes 5555895
chr3 127605497 127605507 CLOCK JASPAR yes 5555896
chr3 127605497 127605507 HEY1 JASPAR yes 5555897
chr3 127605497 127605507 MAX JASPAR yes 5555898
chr3 127605497 127605507 MLXIPL JASPAR yes 5555899
chr3 127605497 127605507 MNT JASPAR yes 5555900
chr3 127605497 127605507 BHLHE40 JASPAR yes 71048194
chr3 127605497 127605507 CLOCK JASPAR yes 71048195
chr3 127605497 127605507 HEY1 JASPAR yes 71048196
chr3 127605497 127605507 MAX JASPAR yes 71048197
chr3 127605497 127605507 MLXIPL JASPAR yes 71048198
chr3 127605497 127605507 MNT JASPAR yes 71048199
chr3 127605499 127605504 MYC TRANSFAC yes 5555901
chr3 127605499 127605504 USF1 TRANSFAC yes 5555902
chr3 127605499 127605504 USF2 TRANSFAC yes 5555903
chr3 127605499 127605504 MYC TRANSFAC yes 71048200
chr3 127605499 127605504 USF1 TRANSFAC yes 71048201
chr3 127605499 127605504 USF2 TRANSFAC yes 71048202
SNP sites on vista42342[chr3:127605255-127605518]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 127605285 rs77581253 T C
GCM1 HIC2 TFE3 TFEB USF1 USF2
7016174
chr3 127605303 rs192568285 T G no 7016175
chr3 127605324 rs545826084 C CT no 7016176
chr3 127605398 rs115220030 T C
RUNX1
7016177
chr3 127605404 rs528817977 A T
RUNX1
7016178
chr3 127605421 rs75079157 T C
CTCF ELF3 ELF5 ELK1 ELK4 ETS1 GABPA SPI1
7016179
chr3 127605443 rs151038000 C T
RFX2 RFX5
7016180
Genes possibly regulated by vista42342[chr3:127605255-127605518]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 127407909 127542051 - MGLL ENSG00000074416.9 127542051 0.85 0.99 4047 36796
chr3 127634075 127706514 + KBTBD12 ENSG00000187715.9 127634075 0.93 0.0 4048 71443
Expression level of Genes
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miRNAs possibly regulated by vista42342[chr3:127605255-127605518]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results