EnhancerDB
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  3. vista42344[chr3:127632728-127633069]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42344[chr3:127632728-127633069]
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Tissue distribution of vista42344
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Transcription factor that possibly regulate vista42344[chr3:127632728-127633069]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 127632735 127632740 SP1 TRANSFAC yes 71048226
chr3 127632737 127632742 TFAP2A TRANSFAC yes 71048227
chr3 127632737 127632743 MZF1 JASPAR yes 71048228
chr3 127632757 127632761 NFE TRANSFAC yes 71048229
chr3 127632771 127632782 HOXC11 JASPAR yes 71048230
chr3 127632771 127632782 HOXC12 JASPAR yes 71048231
chr3 127632772 127632782 HOXD11 JASPAR yes 71048232
chr3 127632778 127632793 NFYB JASPAR yes 71048233
chr3 127632780 127632796 NFYA JASPAR yes 71048234
chr3 127632781 127632799 NFYA JASPAR yes 71048235
chr3 127632784 127632799 MAFK JASPAR yes 71048236
chr3 127632785 127632789 H1TF2 TRANSFAC yes 71048237
chr3 127632785 127632789 NFE TRANSFAC yes 71048238
chr3 127632785 127632789 SRF TRANSFAC yes 71048239
chr3 127632807 127632818 HOXC11 JASPAR yes 71048240
chr3 127632807 127632818 HOXC12 JASPAR yes 71048241
chr3 127632808 127632818 HOXD11 JASPAR yes 71048242
chr3 127632814 127632829 NFYB JASPAR yes 71048243
chr3 127632816 127632832 NFYA JASPAR yes 71048244
chr3 127632817 127632835 NFYA JASPAR yes 71048245
chr3 127632821 127632825 H1TF2 TRANSFAC yes 71048246
chr3 127632821 127632825 NFE TRANSFAC yes 71048247
chr3 127632821 127632825 SRF TRANSFAC yes 71048248
chr3 127632828 127632843 RUNX2 JASPAR yes 71048249
chr3 127632856 127632871 NFYB JASPAR yes 71048250
chr3 127632858 127632874 NFYA JASPAR yes 71048251
chr3 127632859 127632877 NFYA JASPAR yes 71048252
chr3 127632862 127632872 EN2 JASPAR yes 71048253
chr3 127632863 127632867 H1TF2 TRANSFAC yes 71048254
chr3 127632863 127632867 NFE TRANSFAC yes 71048255
chr3 127632863 127632867 SRF TRANSFAC yes 71048256
chr3 127632881 127632887 HiNF-A TRANSFAC yes 71048257
chr3 127632881 127632896 NFYB JASPAR yes 71048258
chr3 127632883 127632899 NFYA JASPAR yes 71048259
chr3 127632884 127632902 NFYA JASPAR yes 71048260
chr3 127632888 127632892 H1TF2 TRANSFAC yes 71048261
chr3 127632888 127632892 NFE TRANSFAC yes 71048262
chr3 127632888 127632892 SRF TRANSFAC yes 71048263
chr3 127632895 127632910 RUNX2 JASPAR yes 71048264
chr3 127632923 127632938 NFYB JASPAR yes 71048265
chr3 127632925 127632941 NFYA JASPAR yes 71048266
chr3 127632926 127632944 NFYA JASPAR yes 71048267
chr3 127632928 127632946 MAFF JASPAR yes 71048268
chr3 127632929 127632944 MAFK JASPAR yes 71048269
chr3 127632930 127632934 H1TF2 TRANSFAC yes 71048270
chr3 127632930 127632934 NFE TRANSFAC yes 71048271
chr3 127632930 127632934 SRF TRANSFAC yes 71048272
chr3 127632947 127632962 NFYB JASPAR yes 71048273
chr3 127632949 127632965 NFYA JASPAR yes 71048274
chr3 127632950 127632968 NFYA JASPAR yes 71048275
chr3 127632952 127632970 MAFF JASPAR yes 71048276
chr3 127632953 127632968 MAFK JASPAR yes 71048277
chr3 127632954 127632958 H1TF2 TRANSFAC yes 71048278
chr3 127632954 127632958 NFE TRANSFAC yes 71048279
chr3 127632954 127632958 SRF TRANSFAC yes 71048280
chr3 127632957 127632968 NRL JASPAR yes 71048281
chr3 127632971 127632986 NFYB JASPAR yes 71048282
chr3 127632973 127632989 NFYA JASPAR yes 71048283
chr3 127632974 127632992 NFYA JASPAR yes 71048284
chr3 127632976 127632994 MAFF JASPAR yes 71048285
chr3 127632977 127632992 MAFK JASPAR yes 71048286
chr3 127632978 127632982 H1TF2 TRANSFAC yes 71048287
chr3 127632978 127632982 NFE TRANSFAC yes 71048288
chr3 127632978 127632982 SRF TRANSFAC yes 71048289
chr3 127632995 127633010 NFYB JASPAR yes 71048290
chr3 127632997 127633013 NFYA JASPAR yes 71048291
chr3 127632998 127633016 NFYA JASPAR yes 71048292
chr3 127633002 127633006 H1TF2 TRANSFAC yes 71048293
chr3 127633002 127633006 NFE TRANSFAC yes 71048294
chr3 127633002 127633006 SRF TRANSFAC yes 71048295
chr3 127633018 127633022 LFA1 TRANSFAC yes 71048296
chr3 127633021 127633039 SRF JASPAR yes 71048297
chr3 127633040 127633050 MSC JASPAR yes 71048298
SNP sites on vista42344[chr3:127632728-127633069]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 127632766 rs186234334 C G,T no 7016351
chr3 127632796 rs190225713 C T
MAFK NFYA
7016352
chr3 127632813 rs534353113 T G
HOXC11 HOXC12 HOXD11
7016353
chr3 127632831 rs552837473 G A
NFYA RUNX2
7016354
chr3 127632889 rs77384180 C T
H1TF2 NFE NFYA NFYB SRF
7016355
chr3 127632967 rs574868238 C T
MAFF MAFK NFYA NRL
7016356
chr3 127632968 rs181282256 T C
MAFF MAFK NFYA NRL
7016357
chr3 127632982 rs143060266 A G
H1TF2 MAFF MAFK NFE NFYA NFYB SRF
7016358
chr3 127632990 rs371103738 T A
MAFF MAFK NFYA
7016359
chr3 127632991 rs375234314 T C
MAFF MAFK NFYA
7016360
chr3 127632992 rs368101693 G T
MAFF MAFK NFYA
7016361
chr3 127633018 rs551064603 T C
LFA1
7016362
chr3 127633068 rs116817175 G A no 7016363
Genes possibly regulated by vista42344[chr3:127632728-127633069]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 127407909 127542051 - MGLL ENSG00000074416.9 127542051 0.85 0.99 4047 9323
chr3 127634075 127706514 + KBTBD12 ENSG00000187715.9 127634075 0.93 0.0 4048 98994
Expression level of Genes
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miRNAs possibly regulated by vista42344[chr3:127632728-127633069]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results