EnhancerDB
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  3. vista42346[chr3:127729316-127729371]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42346[chr3:127729316-127729371]
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Tissue distribution of vista42346
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Transcription factor that possibly regulate vista42346[chr3:127729316-127729371]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 127729041 127729431 EP300 UCSC Txn Factor no Conserved 108530270
chr3 127729077 127729409 CEBPB UCSC Txn Factor no Conserved 108530271
chr3 127729102 127729378 STAT3 UCSC Txn Factor no Conserved 108530272
chr3 127729308 127729326 SRF JASPAR yes 5561929
chr3 127729308 127729326 SRF JASPAR yes 71048351
chr3 127729311 127729317 LEF1 TRANSFAC yes 5561930
chr3 127729311 127729317 SOX10 JASPAR yes 5561931
chr3 127729311 127729317 LEF1 TRANSFAC yes 71048352
chr3 127729311 127729317 SOX10 JASPAR yes 71048353
chr3 127729319 127729329 RELA JASPAR yes 5561932
chr3 127729319 127729329 RELA JASPAR yes 71048354
chr3 127729327 127729337 RUNX3 JASPAR yes 5561933
chr3 127729327 127729337 RUNX3 JASPAR yes 71048355
chr3 127729328 127729337 RUNX2 JASPAR yes 5561934
chr3 127729328 127729337 RUNX2 JASPAR yes 71048356
chr3 127729352 127729361 NFIX JASPAR yes 5561935
chr3 127729352 127729361 NFIX JASPAR yes 71048357
chr3 127729352 127729362 NFIA JASPAR yes 5561936
chr3 127729352 127729362 NFIA JASPAR yes 71048358
chr3 127729354 127729360 NFIC JASPAR yes 5561937
chr3 127729354 127729360 NFIC JASPAR yes 71048359
SNP sites on vista42346[chr3:127729316-127729371]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista42346[chr3:127729316-127729371]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 127634075 127706514 + KBTBD12 ENSG00000187715.9 127634075 0.93 0.0 4048 4759
chr3 127770484 127790526 + SEC61A1 ENSG00000058262.5 127770484 0.66 1.0 4049 58887
Expression level of Genes
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miRNAs possibly regulated by vista42346[chr3:127729316-127729371]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results