EnhancerDB
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  3. vista4235[chr1:184852237-184852590]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4235[chr1:184852237-184852590]
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Tissue distribution of vista4235
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Transcription factor that possibly regulate vista4235[chr1:184852237-184852590]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 184852257 184852273 POU4F2 JASPAR yes 33776844
chr1 184852257 184852273 POU4F2 JASPAR yes 118415408
chr1 184852270 184852277 NKX3-1 JASPAR yes 33776845
chr1 184852270 184852277 NKX3-1 JASPAR yes 118415409
chr1 184852275 184852290 PRDM1 JASPAR yes 33776846
chr1 184852275 184852290 PRDM1 JASPAR yes 118415410
chr1 184852285 184852303 SRF JASPAR yes 33776847
chr1 184852285 184852303 SRF JASPAR yes 118415411
chr1 184852287 184852290 MYB TRANSFAC yes 33776848
chr1 184852287 184852290 MYB TRANSFAC yes 118415412
chr1 184852287 184852298 PROP1 JASPAR yes 33776849
chr1 184852287 184852298 PROP1 JASPAR yes 118415413
chr1 184852287 184852303 SRF JASPAR yes 33776850
chr1 184852287 184852303 SRF JASPAR yes 118415414
chr1 184852287 184852305 SRF JASPAR yes 33776851
chr1 184852287 184852305 SRF JASPAR yes 118415415
chr1 184852288 184852300 SRF JASPAR yes 33776852
chr1 184852288 184852300 SRF JASPAR yes 118415416
chr1 184852290 184852302 SRF JASPAR yes 33776853
chr1 184852290 184852302 SRF JASPAR yes 118415417
chr1 184852293 184852304 CEBPA JASPAR yes 33776854
chr1 184852293 184852304 CEBPA JASPAR yes 118415418
chr1 184852294 184852305 CEBPB JASPAR yes 33776855
chr1 184852294 184852305 CEBPB JASPAR yes 118415419
chr1 184852296 184852304 FEV JASPAR yes 33776856
chr1 184852296 184852304 FEV JASPAR yes 118415420
chr1 184852308 184852317 SOX9 JASPAR yes 33776857
chr1 184852308 184852317 SOX9 JASPAR yes 118415421
chr1 184852317 184852327 SREBF1 JASPAR yes 33776858
chr1 184852317 184852327 SREBF2 JASPAR yes 33776859
chr1 184852317 184852327 SREBF1 JASPAR yes 118415422
chr1 184852317 184852327 SREBF2 JASPAR yes 118415423
chr1 184852317 184852331 JUN JASPAR yes 33776860
chr1 184852317 184852331 JUN JASPAR yes 118415424
chr1 184852318 184852336 ESR1 JASPAR yes 33776861
chr1 184852318 184852336 ESR1 JASPAR yes 118415425
chr1 184852320 184852331 FOSL2 JASPAR yes 33776862
chr1 184852320 184852331 JUNB JASPAR yes 33776863
chr1 184852320 184852331 FOSL2 JASPAR yes 118415426
chr1 184852320 184852331 JUNB JASPAR yes 118415427
chr1 184852321 184852332 FOS JASPAR yes 33776864
chr1 184852321 184852332 FOSL1 JASPAR yes 33776865
chr1 184852321 184852332 JUND JASPAR yes 33776866
chr1 184852321 184852332 FOS JASPAR yes 118415428
chr1 184852321 184852332 FOSL1 JASPAR yes 118415429
chr1 184852321 184852332 JUND JASPAR yes 118415430
chr1 184852321 184852339 MAFF JASPAR yes 33776867
chr1 184852321 184852339 MAFF JASPAR yes 118415431
chr1 184852322 184852329 JUN TRANSFAC yes 33776868
chr1 184852322 184852329 JUN TRANSFAC yes 118415432
chr1 184852322 184852333 NFE2L2 JASPAR yes 33776869
chr1 184852322 184852333 NFE2L2 JASPAR yes 118415433
chr1 184852322 184852336 JUN JASPAR yes 33776870
chr1 184852322 184852336 JUN JASPAR yes 118415434
chr1 184852323 184852334 BATF JASPAR yes 33776871
chr1 184852323 184852334 BATF JASPAR yes 118415435
chr1 184852328 184852342 RXRG JASPAR yes 33776872
chr1 184852328 184852342 RXRG JASPAR yes 118415436
chr1 184852338 184852345 USF2 TRANSFAC yes 33776873
chr1 184852338 184852345 USF2 TRANSFAC yes 118415437
chr1 184852340 184852345 USF2 TRANSFAC yes 33776874
chr1 184852340 184852345 USF2 TRANSFAC yes 118415438
chr1 184852341 184852356 TP53 JASPAR yes 33776875
chr1 184852341 184852356 TP53 JASPAR yes 118415439
chr1 184852359 184852370 EBF1 JASPAR yes 33776876
chr1 184852359 184852370 EBF1 JASPAR yes 118415440
chr1 184852367 184852381 RXRG JASPAR yes 33776877
chr1 184852367 184852381 RXRG JASPAR yes 118415441
chr1 184852404 184852407 MYB TRANSFAC yes 33776878
chr1 184852404 184852407 MYB TRANSFAC yes 118415442
chr1 184852404 184852421 RXRA JASPAR yes 33776879
chr1 184852404 184852421 RXRA JASPAR yes 118415443
chr1 184852415 184852429 RXRB JASPAR yes 33776880
chr1 184852415 184852429 RXRB JASPAR yes 118415444
chr1 184852415 184852430 NR2C2 JASPAR yes 33776881
chr1 184852415 184852430 NR2C2 JASPAR yes 118415445
chr1 184852422 184852425 MYB TRANSFAC yes 33776882
chr1 184852422 184852425 MYB TRANSFAC yes 118415446
chr1 184852424 184852433 VENTX JASPAR yes 33776883
chr1 184852424 184852433 VENTX JASPAR yes 118415447
chr1 184852424 184852434 GSX2 JASPAR yes 33776884
chr1 184852424 184852434 GSX2 JASPAR yes 118415448
chr1 184852425 184852433 BSX JASPAR yes 33776885
chr1 184852425 184852433 BSX JASPAR yes 118415449
chr1 184852427 184852431 YY1 TRANSFAC yes 33776886
chr1 184852427 184852431 YY1 TRANSFAC yes 118415450
chr1 184852430 184852433 MYB TRANSFAC yes 33776887
chr1 184852430 184852433 MYB TRANSFAC yes 118415451
chr1 184852439 184852442 MYB TRANSFAC yes 33776888
chr1 184852439 184852442 MYB TRANSFAC yes 118415452
chr1 184852451 184852461 ESX1 JASPAR yes 33776889
chr1 184852451 184852461 GBX1 JASPAR yes 33776890
chr1 184852451 184852461 GBX2 JASPAR yes 33776891
chr1 184852451 184852461 HESX1 JASPAR yes 33776892
chr1 184852451 184852461 LBX2 JASPAR yes 33776893
chr1 184852451 184852461 LHX2 JASPAR yes 33776894
chr1 184852451 184852461 RAX JASPAR yes 33776895
chr1 184852451 184852461 ESX1 JASPAR yes 118415453
chr1 184852451 184852461 GBX1 JASPAR yes 118415454
chr1 184852451 184852461 GBX2 JASPAR yes 118415455
chr1 184852451 184852461 HESX1 JASPAR yes 118415456
chr1 184852451 184852461 LBX2 JASPAR yes 118415457
chr1 184852451 184852461 LHX2 JASPAR yes 118415458
chr1 184852451 184852461 RAX JASPAR yes 118415459
chr1 184852452 184852460 DLX6 JASPAR yes 33776896
chr1 184852452 184852460 MSX2 JASPAR yes 33776897
chr1 184852452 184852460 DLX6 JASPAR yes 118415460
chr1 184852452 184852460 MSX2 JASPAR yes 118415461
chr1 184852455 184852467 ZBTB7B JASPAR yes 33776898
chr1 184852455 184852467 ZBTB7B JASPAR yes 118415462
chr1 184852458 184852463 SP1 TRANSFAC yes 33776899
chr1 184852458 184852463 SP1 TRANSFAC yes 118415463
chr1 184852462 184852473 FOXP2 JASPAR yes 33776900
chr1 184852462 184852473 FOXP2 JASPAR yes 118415464
chr1 184852462 184852476 FOXF2 JASPAR yes 33776901
chr1 184852462 184852476 FOXF2 JASPAR yes 118415465
chr1 184852463 184852471 FOXG1 JASPAR yes 33776902
chr1 184852463 184852471 FOXG1 JASPAR yes 118415466
chr1 184852468 184852473 GATA2 JASPAR yes 33776903
chr1 184852468 184852473 GATA2 JASPAR yes 118415467
chr1 184852481 184852493 IRF1 JASPAR yes 33776904
chr1 184852481 184852493 IRF1 JASPAR yes 118415468
chr1 184852523 184852527 YY1 TRANSFAC yes 33776905
chr1 184852523 184852527 YY1 TRANSFAC yes 118415469
chr1 184852535 184852546 TBX20 JASPAR yes 33776906
chr1 184852535 184852546 TBX2 JASPAR yes 33776907
chr1 184852535 184852546 TBX20 JASPAR yes 118415470
chr1 184852535 184852546 TBX2 JASPAR yes 118415471
chr1 184852537 184852540 MYB TRANSFAC yes 33776908
chr1 184852537 184852540 MYB TRANSFAC yes 118415472
chr1 184852537 184852545 MGA JASPAR yes 33776909
chr1 184852537 184852545 TBX15 JASPAR yes 33776910
chr1 184852537 184852545 TBX1 JASPAR yes 33776911
chr1 184852537 184852545 TBX4 JASPAR yes 33776912
chr1 184852537 184852545 TBX5 JASPAR yes 33776913
chr1 184852537 184852545 MGA JASPAR yes 118415473
chr1 184852537 184852545 TBX15 JASPAR yes 118415474
chr1 184852537 184852545 TBX1 JASPAR yes 118415475
chr1 184852537 184852545 TBX4 JASPAR yes 118415476
chr1 184852537 184852545 TBX5 JASPAR yes 118415477
SNP sites on vista4235[chr1:184852237-184852590]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 184852364 rs570558774 T G
EBF1
789638
chr1 184852366 rs144912269 G T
EBF1
789639
chr1 184852414 rs234660 G A
RXRA
789640
Genes possibly regulated by vista4235[chr1:184852237-184852590]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 184759858 184943682 - FAM129A ENSG00000135842.12 184943682 0.91 1.0 1649 8908
Expression level of Genes
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miRNAs possibly regulated by vista4235[chr1:184852237-184852590]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results