EnhancerDB
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  3. vista42353[chr3:127962120-127962365]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42353[chr3:127962120-127962365]
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Tissue distribution of vista42353
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Transcription factor that possibly regulate vista42353[chr3:127962120-127962365]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 127962137 127962141 H4TF2 TRANSFAC yes 5578139
chr3 127962137 127962141 H4TF2 TRANSFAC yes 71048640
chr3 127962141 127962145 NFE TRANSFAC yes 5578140
chr3 127962141 127962145 NFE TRANSFAC yes 71048641
chr3 127962141 127962146 GATA1 TRANSFAC yes 5578141
chr3 127962141 127962146 GATA1 TRANSFAC yes 71048642
chr3 127962141 127962147 GATA3 JASPAR yes 5578142
chr3 127962141 127962147 GATA3 JASPAR yes 71048643
chr3 127962164 127962172 MEIS2 JASPAR yes 5578143
chr3 127962164 127962172 MEIS2 JASPAR yes 71048644
chr3 127962165 127962169 NFE TRANSFAC yes 5578144
chr3 127962165 127962169 NFE TRANSFAC yes 71048645
chr3 127962165 127962172 MEIS1 JASPAR yes 5578145
chr3 127962165 127962172 MEIS1 JASPAR yes 71048646
chr3 127962168 127962183 IRF9 JASPAR yes 5578146
chr3 127962168 127962183 IRF9 JASPAR yes 71048647
chr3 127962169 127962187 IRF2 JASPAR yes 5578147
chr3 127962169 127962187 IRF2 JASPAR yes 71048648
chr3 127962170 127962191 IRF1 JASPAR yes 5578148
chr3 127962170 127962191 IRF1 JASPAR yes 71048649
chr3 127962172 127962187 PRDM1 JASPAR yes 5578149
chr3 127962172 127962187 STAT2 JASPAR yes 5578150
chr3 127962172 127962187 PRDM1 JASPAR yes 71048650
chr3 127962172 127962187 STAT2 JASPAR yes 71048651
chr3 127962173 127962187 STAT1 JASPAR yes 5578151
chr3 127962173 127962187 STAT1 JASPAR yes 71048652
chr3 127962174 127962186 IRF1 JASPAR yes 5578152
chr3 127962174 127962186 IRF1 JASPAR yes 71048653
chr3 127962174 127962189 IRF9 JASPAR yes 5578153
chr3 127962174 127962189 IRF9 JASPAR yes 71048654
chr3 127962179 127962183 YY1 TRANSFAC yes 5578154
chr3 127962179 127962183 YY1 TRANSFAC yes 71048655
chr3 127962181 127962191 MZF1 JASPAR yes 5578155
chr3 127962181 127962191 MZF1 JASPAR yes 71048656
chr3 127962187 127962193 ZNF354C JASPAR yes 5578156
chr3 127962187 127962193 ZNF354C JASPAR yes 71048657
chr3 127962236 127962246 TFEC JASPAR yes 5578157
chr3 127962236 127962246 TFEC JASPAR yes 71048658
chr3 127962236 127962250 JUN JASPAR yes 5578158
chr3 127962236 127962250 JUN JASPAR yes 71048659
chr3 127962239 127962250 FOSL2 JASPAR yes 5578159
chr3 127962239 127962250 JUNB JASPAR yes 5578160
chr3 127962239 127962250 FOSL2 JASPAR yes 71048660
chr3 127962239 127962250 JUNB JASPAR yes 71048661
chr3 127962240 127962251 FOS JASPAR yes 5578161
chr3 127962240 127962251 FOSL1 JASPAR yes 5578162
chr3 127962240 127962251 JUND JASPAR yes 5578163
chr3 127962240 127962251 NFE2 JASPAR yes 5578164
chr3 127962240 127962251 FOS JASPAR yes 71048662
chr3 127962240 127962251 FOSL1 JASPAR yes 71048663
chr3 127962240 127962251 JUND JASPAR yes 71048664
chr3 127962240 127962251 NFE2 JASPAR yes 71048665
chr3 127962241 127962250 JDP2 JASPAR yes 5578165
chr3 127962241 127962250 JDP2 JASPAR yes 71048666
chr3 127962241 127962252 FOSL2 JASPAR yes 5578166
chr3 127962241 127962252 JUNB JASPAR yes 5578167
chr3 127962241 127962252 FOSL2 JASPAR yes 71048667
chr3 127962241 127962252 JUNB JASPAR yes 71048668
chr3 127962241 127962255 JUN JASPAR yes 5578168
chr3 127962241 127962255 JUN JASPAR yes 71048669
chr3 127962242 127962253 BATF JASPAR yes 5578169
chr3 127962242 127962253 BATF JASPAR yes 71048670
chr3 127962259 127962264 GATA2 JASPAR yes 5578170
chr3 127962259 127962264 GATA2 JASPAR yes 71048671
chr3 127962271 127962276 GATA2 JASPAR yes 5578171
chr3 127962271 127962276 GATA2 JASPAR yes 71048672
chr3 127962286 127962290 H1TF2 TRANSFAC yes 5578172
chr3 127962286 127962290 NFE TRANSFAC yes 5578173
chr3 127962286 127962290 SRF TRANSFAC yes 5578174
chr3 127962286 127962290 H1TF2 TRANSFAC yes 71048673
chr3 127962286 127962290 NFE TRANSFAC yes 71048674
chr3 127962286 127962290 SRF TRANSFAC yes 71048675
chr3 127962286 127962292 NFYC TRANSFAC yes 5578175
chr3 127962286 127962292 NFYC TRANSFAC yes 71048676
chr3 127962290 127962298 FEV JASPAR yes 5578176
chr3 127962290 127962298 FEV JASPAR yes 71048677
chr3 127962311 127962318 SPIB JASPAR yes 5578177
chr3 127962311 127962318 SPIB JASPAR yes 71048678
chr3 127962350 127962355 GATA2 JASPAR yes 5578178
chr3 127962350 127962355 GATA2 JASPAR yes 71048679
chr3 127962352 127962363 FOXB1 JASPAR yes 5578179
chr3 127962352 127962363 FOXB1 JASPAR yes 71048680
chr3 127962359 127962363 YY1 TRANSFAC yes 5578180
chr3 127962359 127962363 YY1 TRANSFAC yes 71048681
SNP sites on vista42353[chr3:127962120-127962365]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 127962233 rs572469165 G A no 7017997
chr3 127962329 rs2999073 G C no 7017998
Genes possibly regulated by vista42353[chr3:127962120-127962365]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 127783621 127872757 - RUVBL1 ENSG00000175792.7 127872757 0.8 1.0 4050 10637
chr3 127872297 128127485 + EEFSEC ENSG00000132394.6 127872297 0.62 1.0 4051 10177
Expression level of Genes
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miRNAs possibly regulated by vista42353[chr3:127962120-127962365]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results