EnhancerDB
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  3. vista42363[chr3:128267469-128267837]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42363[chr3:128267469-128267837]
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Tissue distribution of vista42363
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Transcription factor that possibly regulate vista42363[chr3:128267469-128267837]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 128267609 128268640 POLR2A UCSC Txn Factor no Conserved 108530306
chr3 128267480 128267494 TCF7L2 JASPAR yes 5607928
chr3 128267480 128267494 TCF7L2 JASPAR yes 71049113
chr3 128267500 128267521 IRF1 JASPAR yes 5607929
chr3 128267500 128267521 IRF1 JASPAR yes 71049114
chr3 128267502 128267517 PRDM1 JASPAR yes 5607930
chr3 128267502 128267517 PRDM1 JASPAR yes 71049115
chr3 128267507 128267522 LEF1 JASPAR yes 5607931
chr3 128267507 128267522 LEF1 JASPAR yes 71049116
chr3 128267515 128267520 GATA2 JASPAR yes 5607932
chr3 128267515 128267520 GATA2 JASPAR yes 71049117
chr3 128267538 128267542 NFE TRANSFAC yes 5607933
chr3 128267538 128267542 NFE TRANSFAC yes 71049118
chr3 128267543 128267562 PAX5 JASPAR yes 5607934
chr3 128267543 128267562 PAX5 JASPAR yes 71049119
chr3 128267546 128267563 PAX1 JASPAR yes 5607935
chr3 128267546 128267563 PAX1 JASPAR yes 71049120
chr3 128267550 128267559 NKX2-8 JASPAR yes 5607936
chr3 128267550 128267559 NKX2-8 JASPAR yes 71049121
chr3 128267550 128267560 NKX2-3 JASPAR yes 5607937
chr3 128267550 128267560 NKX2-3 JASPAR yes 71049122
chr3 128267557 128267571 NR2F1 JASPAR yes 5607938
chr3 128267557 128267571 NR2F1 JASPAR yes 71049123
chr3 128267580 128267591 CDX2 JASPAR yes 5607939
chr3 128267580 128267591 CDX2 JASPAR yes 71049124
chr3 128267617 128267633 E2F2 JASPAR yes 5607940
chr3 128267617 128267633 E2F2 JASPAR yes 71049125
chr3 128267628 128267632 YY1 TRANSFAC yes 5607941
chr3 128267628 128267632 YY1 TRANSFAC yes 71049126
chr3 128267657 128267677 RREB1 JASPAR yes 5607942
chr3 128267657 128267677 RREB1 JASPAR yes 71049127
chr3 128267662 128267682 RREB1 JASPAR yes 5607943
chr3 128267662 128267682 RREB1 JASPAR yes 71049128
chr3 128267663 128267680 ZNF410 JASPAR yes 5607944
chr3 128267663 128267680 ZNF410 JASPAR yes 71049129
chr3 128267671 128267681 SREBF2 JASPAR yes 5607945
chr3 128267671 128267681 SREBF2 JASPAR yes 71049130
chr3 128267672 128267684 PKNOX2 JASPAR yes 5607946
chr3 128267672 128267684 PKNOX2 JASPAR yes 71049131
chr3 128267677 128267688 BATF JASPAR yes 5607947
chr3 128267677 128267688 BATF JASPAR yes 71049132
chr3 128267689 128267693 NFE TRANSFAC yes 5607948
chr3 128267689 128267693 NFE TRANSFAC yes 71049133
chr3 128267689 128267702 SMAD2 JASPAR yes 5607949
chr3 128267689 128267702 SMAD2 JASPAR yes 71049134
chr3 128267689 128267703 TLX1 JASPAR yes 5607950
chr3 128267689 128267703 TLX1 JASPAR yes 71049135
chr3 128267703 128267718 NFYB JASPAR yes 5607951
chr3 128267703 128267718 NFYB JASPAR yes 71049136
chr3 128267705 128267721 NFYA JASPAR yes 5607952
chr3 128267705 128267721 NFYA JASPAR yes 71049137
chr3 128267706 128267710 NFE TRANSFAC yes 5607953
chr3 128267706 128267710 NFE TRANSFAC yes 71049138
chr3 128267706 128267724 NFYA JASPAR yes 5607954
chr3 128267706 128267724 NFYA JASPAR yes 71049139
chr3 128267710 128267714 H1TF2 TRANSFAC yes 5607955
chr3 128267710 128267714 NFE TRANSFAC yes 5607956
chr3 128267710 128267714 SRF TRANSFAC yes 5607957
chr3 128267710 128267714 H1TF2 TRANSFAC yes 71049140
chr3 128267710 128267714 NFE TRANSFAC yes 71049141
chr3 128267710 128267714 SRF TRANSFAC yes 71049142
chr3 128267716 128267730 GATA2 JASPAR yes 5607958
chr3 128267716 128267730 GATA2 JASPAR yes 71049143
chr3 128267720 128267728 GATA3 JASPAR yes 5607959
chr3 128267720 128267728 GATA5 JASPAR yes 5607960
chr3 128267720 128267728 GATA3 JASPAR yes 71049144
chr3 128267720 128267728 GATA5 JASPAR yes 71049145
chr3 128267730 128267750 RREB1 JASPAR yes 5607961
chr3 128267730 128267750 RREB1 JASPAR yes 71049146
chr3 128267731 128267746 NR2C2 JASPAR yes 5607962
chr3 128267731 128267746 NR2C2 JASPAR yes 71049147
chr3 128267731 128267751 RREB1 JASPAR yes 5607963
chr3 128267731 128267751 RREB1 JASPAR yes 71049148
chr3 128267733 128267744 E2F6 JASPAR yes 5607964
chr3 128267733 128267744 E2F6 JASPAR yes 71049149
chr3 128267736 128267756 RREB1 JASPAR yes 5607965
chr3 128267736 128267756 RREB1 JASPAR yes 71049150
chr3 128267738 128267758 RREB1 JASPAR yes 5607966
chr3 128267738 128267758 RREB1 JASPAR yes 71049151
chr3 128267739 128267754 RUNX2 JASPAR yes 5607967
chr3 128267739 128267754 RUNX2 JASPAR yes 71049152
chr3 128267777 128267798 ZNF263 JASPAR yes 5607968
chr3 128267777 128267798 ZNF263 JASPAR yes 71049153
chr3 128267778 128267799 ZNF263 JASPAR yes 5607969
chr3 128267778 128267799 ZNF263 JASPAR yes 71049154
chr3 128267781 128267787 SP1 TRANSFAC yes 5607970
chr3 128267781 128267787 SP1 TRANSFAC yes 71049155
chr3 128267781 128267791 SP1 JASPAR yes 5607971
chr3 128267781 128267791 SP1 JASPAR yes 71049156
chr3 128267782 128267793 E2F6 JASPAR yes 5607972
chr3 128267782 128267793 E2F6 JASPAR yes 71049157
chr3 128267790 128267798 EHF JASPAR yes 5607973
chr3 128267790 128267798 EHF JASPAR yes 71049158
chr3 128267792 128267797 ETS2 TRANSFAC yes 5607974
chr3 128267792 128267797 ETS2 TRANSFAC yes 71049159
chr3 128267795 128267806 TBX2 JASPAR yes 5607975
chr3 128267795 128267806 TBX2 JASPAR yes 71049160
chr3 128267814 128267835 ZNF263 JASPAR yes 5607976
chr3 128267814 128267835 ZNF263 JASPAR yes 71049161
chr3 128267820 128267824 H4TF2 TRANSFAC yes 5607977
chr3 128267820 128267824 H4TF2 TRANSFAC yes 71049162
chr3 128267826 128267837 E2F6 JASPAR yes 5607978
chr3 128267826 128267837 E2F6 JASPAR yes 71049163
chr3 128267835 128267847 YY1 JASPAR yes 5607979
chr3 128267835 128267847 YY1 JASPAR yes 71049164
SNP sites on vista42363[chr3:128267469-128267837]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 128267562 rs144370237 C A
NR2F1 PAX1 PAX5
7020779
chr3 128267598 rs187263929 G A no 7020780
chr3 128267611 rs55874919 C T
POLR2A
7020781
chr3 128267612 rs116692756 G A
POLR2A
7020782
chr3 128267762 rs192018264 T A
POLR2A
7020783
chr3 128267774 rs554385865 C T
POLR2A
7020784
Genes possibly regulated by vista42363[chr3:128267469-128267837]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 128181282 128186091 - DNAJB8 ENSG00000179407.3 128186091 0.82 0.0 4052 18622
chr3 128198270 128212028 - GATA2 ENSG00000179348.7 128212028 0.89 0.99 4053 44559
chr3 128290843 128294929 - C3orf27 ENSG00000198685.2 128294929 0.93 1.0 4054 72908
Expression level of Genes
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miRNAs possibly regulated by vista42363[chr3:128267469-128267837]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results