EnhancerDB
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  3. vista42364[chr3:128304030-128304455]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42364[chr3:128304030-128304455]
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Tissue distribution of vista42364
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Transcription factor that possibly regulate vista42364[chr3:128304030-128304455]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 128304033 128304053 RREB1 JASPAR yes 5612308
chr3 128304033 128304053 RREB1 JASPAR yes 71049165
chr3 128304052 128304058 MZF1 JASPAR yes 5612309
chr3 128304052 128304058 MZF1 JASPAR yes 71049166
chr3 128304053 128304063 SP1 JASPAR yes 5612310
chr3 128304053 128304063 SP1 TRANSFAC yes 5612311
chr3 128304053 128304063 SP1 JASPAR yes 71049167
chr3 128304053 128304063 SP1 TRANSFAC yes 71049168
chr3 128304054 128304064 SP1 JASPAR yes 5612312
chr3 128304054 128304064 SP1 JASPAR yes 71049169
chr3 128304055 128304075 RREB1 JASPAR yes 5612313
chr3 128304055 128304075 RREB1 JASPAR yes 71049170
chr3 128304056 128304066 ZNF740 JASPAR yes 5612314
chr3 128304056 128304066 ZNF740 JASPAR yes 71049171
chr3 128304057 128304067 ZNF740 JASPAR yes 5612315
chr3 128304057 128304067 ZNF740 JASPAR yes 71049172
chr3 128304106 128304124 SRF JASPAR yes 5612316
chr3 128304106 128304124 SRF JASPAR yes 71049173
chr3 128304107 128304115 NR4A2 JASPAR yes 5612317
chr3 128304107 128304115 NR4A2 JASPAR yes 71049174
chr3 128304108 128304118 RORA JASPAR yes 5612318
chr3 128304108 128304118 RORA JASPAR yes 71049175
chr3 128304108 128304124 SRF JASPAR yes 5612319
chr3 128304108 128304124 SRF JASPAR yes 71049176
chr3 128304108 128304126 SRF JASPAR yes 5612320
chr3 128304108 128304126 SRF JASPAR yes 71049177
chr3 128304109 128304121 SRF JASPAR yes 5612321
chr3 128304109 128304121 SRF JASPAR yes 71049178
chr3 128304111 128304123 SRF JASPAR yes 5612322
chr3 128304111 128304123 SRF JASPAR yes 71049179
chr3 128304114 128304118 YY1 TRANSFAC yes 5612323
chr3 128304114 128304118 YY1 TRANSFAC yes 71049180
chr3 128304127 128304131 H4TF2 TRANSFAC yes 5612324
chr3 128304127 128304131 H4TF2 TRANSFAC yes 71049181
chr3 128304127 128304144 RARA JASPAR yes 5612325
chr3 128304127 128304144 RARA JASPAR yes 71049182
chr3 128304139 128304149 HMBOX1 JASPAR yes 5612326
chr3 128304139 128304149 HMBOX1 JASPAR yes 71049183
chr3 128304141 128304144 MYB TRANSFAC yes 5612327
chr3 128304141 128304144 MYB TRANSFAC yes 71049184
chr3 128304150 128304164 RORA JASPAR yes 5612328
chr3 128304150 128304164 RORA JASPAR yes 71049185
chr3 128304150 128304165 JUND JASPAR yes 5612329
chr3 128304150 128304165 JUND JASPAR yes 71049186
chr3 128304151 128304164 JUN JASPAR yes 5612330
chr3 128304151 128304164 JUN JASPAR yes 71049187
chr3 128304152 128304166 ATF7 JASPAR yes 5612331
chr3 128304152 128304166 ATF7 JASPAR yes 71049188
chr3 128304153 128304163 RORA JASPAR yes 5612332
chr3 128304153 128304163 RORA JASPAR yes 71049189
chr3 128304153 128304165 JDP2 JASPAR yes 5612333
chr3 128304153 128304165 JDP2 JASPAR yes 71049190
chr3 128304153 128304168 JUND JASPAR yes 5612334
chr3 128304153 128304168 JUND JASPAR yes 71049191
chr3 128304154 128304167 JUN JASPAR yes 5612335
chr3 128304154 128304167 NR2F1 JASPAR yes 5612336
chr3 128304154 128304167 JUN JASPAR yes 71049192
chr3 128304154 128304167 NR2F1 JASPAR yes 71049193
chr3 128304155 128304163 CREB1 JASPAR yes 5612337
chr3 128304155 128304163 CREB1 JASPAR yes 71049194
chr3 128304156 128304174 RARA JASPAR yes 5612338
chr3 128304156 128304174 RARA JASPAR yes 71049195
chr3 128304158 128304162 ESR1 TRANSFAC yes 5612339
chr3 128304158 128304162 ESR1 TRANSFAC yes 71049196
chr3 128304158 128304168 EMX1 JASPAR yes 5612340
chr3 128304158 128304168 EVX1 JASPAR yes 5612341
chr3 128304158 128304168 EVX2 JASPAR yes 5612342
chr3 128304158 128304168 EMX1 JASPAR yes 71049197
chr3 128304158 128304168 EVX1 JASPAR yes 71049198
chr3 128304158 128304168 EVX2 JASPAR yes 71049199
chr3 128304161 128304165 YY1 TRANSFAC yes 5612343
chr3 128304161 128304165 YY1 TRANSFAC yes 71049200
chr3 128304164 128304176 GLI2 JASPAR yes 5612344
chr3 128304164 128304176 GLI2 JASPAR yes 71049201
chr3 128304167 128304172 SP1 TRANSFAC yes 5612345
chr3 128304167 128304172 SP1 TRANSFAC yes 71049202
chr3 128304172 128304190 TP63 JASPAR yes 5612346
chr3 128304172 128304190 TP63 JASPAR yes 71049203
chr3 128304173 128304186 ATF4 JASPAR yes 5612347
chr3 128304173 128304186 ATF4 JASPAR yes 71049204
chr3 128304196 128304204 GATA5 JASPAR yes 5612348
chr3 128304196 128304204 GATA5 JASPAR yes 71049205
chr3 128304196 128304214 SRF JASPAR yes 5612349
chr3 128304196 128304214 SRF JASPAR yes 71049206
chr3 128304199 128304220 IRF1 JASPAR yes 5612350
chr3 128304199 128304220 IRF1 JASPAR yes 71049207
chr3 128304203 128304218 PRDM1 JASPAR yes 5612351
chr3 128304203 128304218 STAT2 JASPAR yes 5612352
chr3 128304203 128304218 PRDM1 JASPAR yes 71049208
chr3 128304203 128304218 STAT2 JASPAR yes 71049209
chr3 128304240 128304245 ETS2 TRANSFAC yes 5612353
chr3 128304240 128304245 ETS2 TRANSFAC yes 71049210
chr3 128304251 128304263 IRF1 JASPAR yes 5612354
chr3 128304251 128304263 IRF1 JASPAR yes 71049211
chr3 128304313 128304332 CTCF JASPAR yes 5612355
chr3 128304313 128304332 CTCF JASPAR yes 71049212
chr3 128304322 128304343 ZNF263 JASPAR yes 5612356
chr3 128304322 128304343 ZNF263 JASPAR yes 71049213
chr3 128304342 128304352 NFKB1 JASPAR yes 5612357
chr3 128304342 128304352 NFKB1 JASPAR yes 71049214
chr3 128304342 128304353 NFKB1 JASPAR yes 5612358
chr3 128304342 128304353 NFKB1 JASPAR yes 71049215
chr3 128304358 128304373 STAT1 JASPAR yes 5612359
chr3 128304358 128304373 STAT1 JASPAR yes 71049216
chr3 128304360 128304371 STAT1 JASPAR yes 5612360
chr3 128304360 128304371 STAT3 JASPAR yes 5612361
chr3 128304360 128304371 STAT1 JASPAR yes 71049217
chr3 128304360 128304371 STAT3 JASPAR yes 71049218
chr3 128304360 128304373 ELF1 JASPAR yes 5612362
chr3 128304360 128304373 ELF1 JASPAR yes 71049219
chr3 128304361 128304373 ELF4 JASPAR yes 5612363
chr3 128304361 128304373 ELF4 JASPAR yes 71049220
chr3 128304362 128304373 ELF5 JASPAR yes 5612364
chr3 128304362 128304373 ELF5 JASPAR yes 71049221
chr3 128304363 128304370 ETS1 TRANSFAC yes 5612365
chr3 128304363 128304370 ETS1 TRANSFAC yes 71049222
chr3 128304372 128304391 RFX2 JASPAR yes 5612366
chr3 128304372 128304391 RFX2 JASPAR yes 71049223
chr3 128304379 128304385 NFIC JASPAR yes 5612367
chr3 128304379 128304385 NFIC JASPAR yes 71049224
chr3 128304383 128304393 FIGLA JASPAR yes 5612368
chr3 128304383 128304393 MSC JASPAR yes 5612369
chr3 128304383 128304393 MYF6 JASPAR yes 5612370
chr3 128304383 128304393 TFAP4 JASPAR yes 5612371
chr3 128304383 128304393 FIGLA JASPAR yes 71049225
chr3 128304383 128304393 MSC JASPAR yes 71049226
chr3 128304383 128304393 MYF6 JASPAR yes 71049227
chr3 128304383 128304393 TFAP4 JASPAR yes 71049228
chr3 128304396 128304399 MYB TRANSFAC yes 5612372
chr3 128304396 128304399 MYB TRANSFAC yes 71049229
chr3 128304414 128304419 TFAP2A TRANSFAC yes 5612373
chr3 128304414 128304419 TFAP2A TRANSFAC yes 71049230
chr3 128304414 128304420 MZF1 JASPAR yes 5612374
chr3 128304414 128304420 MZF1 JASPAR yes 71049231
chr3 128304430 128304436 TCF4 TRANSFAC yes 5612375
chr3 128304430 128304436 TCF4 TRANSFAC yes 71049232
chr3 128304433 128304448 MEF2C JASPAR yes 5612376
chr3 128304433 128304448 MEF2C JASPAR yes 71049233
chr3 128304435 128304450 STAT1 JASPAR yes 5612377
chr3 128304435 128304450 STAT1 JASPAR yes 71049234
chr3 128304437 128304448 STAT1 JASPAR yes 5612378
chr3 128304437 128304448 STAT3 JASPAR yes 5612379
chr3 128304437 128304448 STAT1 JASPAR yes 71049235
chr3 128304437 128304448 STAT3 JASPAR yes 71049236
chr3 128304455 128304466 CDX2 JASPAR yes 5612380
chr3 128304455 128304466 CDX2 JASPAR yes 71049237
SNP sites on vista42364[chr3:128304030-128304455]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 128304058 rs550092965 ACCC A
MZF1 RREB1 SP1 ZNF740
7021201
chr3 128304373 rs149118835 G A
ELF1 ELF4 ELF5 RFX2 STAT1
7021202
Genes possibly regulated by vista42364[chr3:128304030-128304455]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 128198270 128212028 - GATA2 ENSG00000179348.7 128212028 0.89 0.99 4053 7998
chr3 128290843 128294929 - C3orf27 ENSG00000198685.2 128294929 0.93 1.0 4054 90899
chr3 128338817 128399918 - RPN1 ENSG00000163902.7 128399918 0.61 1.0 4055 4537
Expression level of Genes
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miRNAs possibly regulated by vista42364[chr3:128304030-128304455]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results