EnhancerDB
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  3. vista42369[chr3:128327283-128327483]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42369[chr3:128327283-128327483]
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Tissue distribution of vista42369
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Transcription factor that possibly regulate vista42369[chr3:128327283-128327483]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 128327194 128327564 CTCF UCSC Txn Factor no Conserved 108530308
chr3 128327236 128327506 SMC3 UCSC Txn Factor no Conserved 108530309
chr3 128327237 128327501 RAD21 UCSC Txn Factor no Conserved 108530310
chr3 128327284 128327289 SP1 TRANSFAC yes 5615360
chr3 128327284 128327289 SP1 TRANSFAC yes 71049409
chr3 128327286 128327297 NRF1 JASPAR yes 5615361
chr3 128327286 128327297 NRF1 JASPAR yes 71049410
chr3 128327287 128327292 SP1 TRANSFAC yes 5615362
chr3 128327287 128327292 SP1 TRANSFAC yes 71049411
chr3 128327288 128327293 SP1 TRANSFAC yes 5615363
chr3 128327288 128327293 SP1 TRANSFAC yes 71049412
chr3 128327298 128327311 SMAD2 JASPAR yes 5615364
chr3 128327298 128327311 SMAD2 JASPAR yes 71049413
chr3 128327340 128327358 ESR2 JASPAR yes 5615365
chr3 128327340 128327358 ESR2 JASPAR yes 71049414
chr3 128327349 128327363 PLAG1 JASPAR yes 5615366
chr3 128327349 128327363 PLAG1 JASPAR yes 71049415
chr3 128327356 128327361 SP1 TRANSFAC yes 5615367
chr3 128327356 128327361 SP1 TRANSFAC yes 71049416
chr3 128327357 128327362 SP1 TRANSFAC yes 5615368
chr3 128327357 128327362 SP1 TRANSFAC yes 71049417
chr3 128327357 128327363 SP1 TRANSFAC yes 5615369
chr3 128327357 128327363 SP1 TRANSFAC yes 71049418
chr3 128327358 128327366 SP1 TRANSFAC yes 5615370
chr3 128327358 128327366 WT1 TRANSFAC yes 5615371
chr3 128327358 128327366 SP1 TRANSFAC yes 71049419
chr3 128327358 128327366 WT1 TRANSFAC yes 71049420
chr3 128327362 128327381 CTCF JASPAR yes 5615372
chr3 128327362 128327381 CTCF JASPAR yes 71049421
chr3 128327387 128327391 H1TF2 TRANSFAC yes 5615373
chr3 128327387 128327391 NFE TRANSFAC yes 5615374
chr3 128327387 128327391 SRF TRANSFAC yes 5615375
chr3 128327387 128327391 H1TF2 TRANSFAC yes 71049422
chr3 128327387 128327391 NFE TRANSFAC yes 71049423
chr3 128327387 128327391 SRF TRANSFAC yes 71049424
chr3 128327414 128327418 LFA1 TRANSFAC yes 5615376
chr3 128327414 128327418 LFA1 TRANSFAC yes 71049425
chr3 128327457 128327463 NFIC JASPAR yes 5615377
chr3 128327457 128327463 NFIC JASPAR yes 71049426
chr3 128327467 128327471 NFE TRANSFAC yes 5615378
chr3 128327467 128327471 NFE TRANSFAC yes 71049427
SNP sites on vista42369[chr3:128327283-128327483]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 128327292 rs77310204 G T
CTCF NRF1 RAD21 SMC3 SP1
7021496
chr3 128327336 rs562218215 G A,C
CTCF RAD21 SMC3
7021497
Genes possibly regulated by vista42369[chr3:128327283-128327483]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 128290843 128294929 - C3orf27 ENSG00000198685.2 128294929 0.93 1.0 4054 67646
chr3 128338817 128399918 - RPN1 ENSG00000163902.7 128399918 0.61 1.0 4055 27565
Expression level of Genes
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miRNAs possibly regulated by vista42369[chr3:128327283-128327483]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results