EnhancerDB
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  3. vista42374[chr3:128338287-128338590]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42374[chr3:128338287-128338590]
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Tissue distribution of vista42374
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Transcription factor that possibly regulate vista42374[chr3:128338287-128338590]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 128338467 128338638 FOS UCSC Txn Factor no Conserved 108530318
chr3 128338473 128338729 CEBPB UCSC Txn Factor no Conserved 108530319
chr3 128338304 128338321 PAX1 JASPAR yes 5616300
chr3 128338304 128338321 PAX9 JASPAR yes 5616301
chr3 128338304 128338321 PAX1 JASPAR yes 71049588
chr3 128338304 128338321 PAX9 JASPAR yes 71049589
chr3 128338311 128338317 YY1 JASPAR yes 5616302
chr3 128338311 128338317 YY1 JASPAR yes 71049590
chr3 128338311 128338329 ESR2 JASPAR yes 5616303
chr3 128338311 128338329 ESR2 JASPAR yes 71049591
chr3 128338312 128338326 TLX1 JASPAR yes 5616304
chr3 128338312 128338326 TLX1 JASPAR yes 71049592
chr3 128338329 128338332 MYB TRANSFAC yes 5616305
chr3 128338329 128338332 MYB TRANSFAC yes 71049593
chr3 128338335 128338342 NKX3-1 JASPAR yes 5616306
chr3 128338335 128338342 NKX3-1 JASPAR yes 71049594
chr3 128338339 128338342 MYB TRANSFAC yes 5616307
chr3 128338339 128338342 MYB TRANSFAC yes 71049595
chr3 128338367 128338371 YY1 TRANSFAC yes 5616308
chr3 128338367 128338371 YY1 TRANSFAC yes 71049596
chr3 128338388 128338402 ZIC1 JASPAR yes 5616309
chr3 128338388 128338402 ZIC1 JASPAR yes 71049597
chr3 128338388 128338403 ZIC3 JASPAR yes 5616310
chr3 128338388 128338403 ZIC4 JASPAR yes 5616311
chr3 128338388 128338403 ZIC3 JASPAR yes 71049598
chr3 128338388 128338403 ZIC4 JASPAR yes 71049599
chr3 128338400 128338407 SPIB JASPAR yes 5616312
chr3 128338400 128338407 SPIB JASPAR yes 71049600
chr3 128338400 128338421 ZNF263 JASPAR yes 5616313
chr3 128338400 128338421 ZNF263 JASPAR yes 71049601
chr3 128338401 128338422 ZNF263 JASPAR yes 5616314
chr3 128338401 128338422 ZNF263 JASPAR yes 71049602
chr3 128338411 128338415 LFA1 TRANSFAC yes 5616315
chr3 128338411 128338415 LFA1 TRANSFAC yes 71049603
chr3 128338438 128338442 NFE TRANSFAC yes 5616316
chr3 128338438 128338442 NFE TRANSFAC yes 71049604
chr3 128338446 128338452 MZF1 JASPAR yes 5616317
chr3 128338446 128338452 MZF1 JASPAR yes 71049605
chr3 128338448 128338458 TFE3 JASPAR yes 5616318
chr3 128338448 128338458 TFEB JASPAR yes 5616319
chr3 128338448 128338458 TFE3 JASPAR yes 71049606
chr3 128338448 128338458 TFEB JASPAR yes 71049607
chr3 128338448 128338459 USF1 JASPAR yes 5616320
chr3 128338448 128338459 USF1 JASPAR yes 71049608
chr3 128338450 128338463 NR2F1 JASPAR yes 5616321
chr3 128338450 128338463 NR2F1 JASPAR yes 71049609
chr3 128338451 128338469 RARA JASPAR yes 5616322
chr3 128338451 128338469 RARA JASPAR yes 71049610
chr3 128338454 128338468 RXRB JASPAR yes 5616323
chr3 128338454 128338468 RXRG JASPAR yes 5616324
chr3 128338454 128338468 RXRB JASPAR yes 71049611
chr3 128338454 128338468 RXRG JASPAR yes 71049612
chr3 128338479 128338486 SPIB JASPAR yes 5616325
chr3 128338479 128338486 SPIB JASPAR yes 71049613
chr3 128338495 128338501 TCF4 TRANSFAC yes 5616326
chr3 128338495 128338501 TCF4 TRANSFAC yes 71049614
chr3 128338511 128338516 ETS2 TRANSFAC yes 5616327
chr3 128338511 128338516 ETS2 TRANSFAC yes 71049615
chr3 128338513 128338531 MAFF JASPAR yes 5616328
chr3 128338513 128338531 MAFF JASPAR yes 71049616
chr3 128338515 128338530 MAFK JASPAR yes 5616329
chr3 128338515 128338530 MAFK JASPAR yes 71049617
chr3 128338522 128338528 JUN TRANSFAC yes 5616330
chr3 128338522 128338528 JUN TRANSFAC yes 71049618
chr3 128338527 128338541 JUN JASPAR yes 5616331
chr3 128338527 128338541 JUN JASPAR yes 71049619
chr3 128338529 128338540 BATF JASPAR yes 5616332
chr3 128338529 128338540 BATF JASPAR yes 71049620
chr3 128338530 128338541 FOSL2 JASPAR yes 5616333
chr3 128338530 128338541 JUNB JASPAR yes 5616334
chr3 128338530 128338541 FOSL2 JASPAR yes 71049621
chr3 128338530 128338541 JUNB JASPAR yes 71049622
chr3 128338531 128338542 FOS JASPAR yes 5616335
chr3 128338531 128338542 FOSL1 JASPAR yes 5616336
chr3 128338531 128338542 JUND JASPAR yes 5616337
chr3 128338531 128338542 NFE2 JASPAR yes 5616338
chr3 128338531 128338542 FOS JASPAR yes 71049623
chr3 128338531 128338542 FOSL1 JASPAR yes 71049624
chr3 128338531 128338542 JUND JASPAR yes 71049625
chr3 128338531 128338542 NFE2 JASPAR yes 71049626
chr3 128338532 128338541 JDP2 JASPAR yes 5616339
chr3 128338532 128338541 JDP2 JASPAR yes 71049627
chr3 128338532 128338543 FOSL2 JASPAR yes 5616340
chr3 128338532 128338543 JUNB JASPAR yes 5616341
chr3 128338532 128338543 FOSL2 JASPAR yes 71049628
chr3 128338532 128338543 JUNB JASPAR yes 71049629
chr3 128338540 128338548 EHF JASPAR yes 5616342
chr3 128338540 128338548 EHF JASPAR yes 71049630
chr3 128338561 128338573 YY1 JASPAR yes 5616343
chr3 128338561 128338573 YY1 JASPAR yes 71049631
chr3 128338571 128338590 PAX5 JASPAR yes 5616344
chr3 128338571 128338590 PAX5 JASPAR yes 71049632
SNP sites on vista42374[chr3:128338287-128338590]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 128338293 rs559082827 CTGAG C no 7021605
chr3 128338388 rs115140826 C T
ZIC1 ZIC3 ZIC4
7021606
chr3 128338538 rs73864840 T C
BATF CEBPB FOS FOSL1 FOSL2 JDP2 JUN JUNB JUND NFE2
7021607
chr3 128338585 rs12634174 A G
CEBPB FOS PAX5
7021608
Genes possibly regulated by vista42374[chr3:128338287-128338590]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 128290843 128294929 - C3orf27 ENSG00000198685.2 128294929 0.93 1.0 4054 56642
chr3 128338817 128399918 - RPN1 ENSG00000163902.7 128399918 0.61 1.0 4055 38672
Expression level of Genes
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miRNAs possibly regulated by vista42374[chr3:128338287-128338590]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results