EnhancerDB
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  3. vista42376[chr3:128390113-128390338]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42376[chr3:128390113-128390338]
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Tissue distribution of vista42376
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Transcription factor that possibly regulate vista42376[chr3:128390113-128390338]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 128390113 128390120 JUN TRANSFAC yes 71049694
chr3 128390129 128390143 MTF1 JASPAR yes 71049695
chr3 128390158 128390173 NR2C2 JASPAR yes 71049696
chr3 128390192 128390196 H1TF2 TRANSFAC yes 71049697
chr3 128390192 128390196 NFE TRANSFAC yes 71049698
chr3 128390192 128390196 SRF TRANSFAC yes 71049699
chr3 128390196 128390217 ZNF263 JASPAR yes 71049700
chr3 128390199 128390203 YY1 TRANSFAC yes 71049701
chr3 128390199 128390220 ZNF263 JASPAR yes 71049702
chr3 128390201 128390211 MZF1 JASPAR yes 71049703
chr3 128390201 128390222 ZNF263 JASPAR yes 71049704
chr3 128390202 128390223 ZNF263 JASPAR yes 71049705
chr3 128390204 128390210 SP1 TRANSFAC yes 71049706
chr3 128390209 128390224 NR2C2 JASPAR yes 71049707
chr3 128390226 128390230 NFE TRANSFAC yes 71049708
chr3 128390235 128390239 YY1 TRANSFAC yes 71049709
chr3 128390241 128390252 USF2 JASPAR yes 71049710
chr3 128390242 128390252 BHLHE40 JASPAR yes 71049711
chr3 128390242 128390252 BHLHE41 JASPAR yes 71049712
chr3 128390242 128390252 MLXIPL JASPAR yes 71049713
chr3 128390242 128390252 MLX JASPAR yes 71049714
chr3 128390242 128390252 SREBF2 JASPAR yes 71049715
chr3 128390242 128390252 TFE3 JASPAR yes 71049716
chr3 128390242 128390252 TFEB JASPAR yes 71049717
chr3 128390242 128390252 TFEC JASPAR yes 71049718
chr3 128390242 128390253 USF1 JASPAR yes 71049719
chr3 128390242 128390253 USF2 JASPAR yes 71049720
chr3 128390243 128390253 MAX JASPAR yes 71049721
chr3 128390244 128390249 MYC TRANSFAC yes 71049722
chr3 128390244 128390249 USF1 TRANSFAC yes 71049723
chr3 128390244 128390249 USF2 TRANSFAC yes 71049724
chr3 128390270 128390280 SREBF2 JASPAR yes 71049725
chr3 128390270 128390280 TFE3 JASPAR yes 71049726
chr3 128390270 128390280 TFEB JASPAR yes 71049727
chr3 128390270 128390280 TFEC JASPAR yes 71049728
chr3 128390270 128390281 USF1 JASPAR yes 71049729
chr3 128390270 128390281 USF2 JASPAR yes 71049730
chr3 128390288 128390291 MYB TRANSFAC yes 71049731
chr3 128390288 128390304 SOX4 JASPAR yes 71049732
chr3 128390289 128390302 POU2F2 JASPAR yes 71049733
chr3 128390289 128390303 POU1F1 JASPAR yes 71049734
chr3 128390290 128390302 POU3F1 JASPAR yes 71049735
chr3 128390290 128390302 POU3F2 JASPAR yes 71049736
chr3 128390290 128390303 POU3F3 JASPAR yes 71049737
chr3 128390291 128390295 YY1 TRANSFAC yes 71049738
chr3 128390291 128390303 POU2F1 JASPAR yes 71049739
chr3 128390292 128390299 POU2F1 TRANSFAC yes 71049740
chr3 128390292 128390299 POU2F2C TRANSFAC yes 71049741
chr3 128390292 128390299 POU2F2 TRANSFAC yes 71049742
chr3 128390292 128390300 POU2F1 TRANSFAC yes 71049743
chr3 128390292 128390301 POU3F4 JASPAR yes 71049744
chr3 128390292 128390301 POU5F1B JASPAR yes 71049745
chr3 128390297 128390301 YY1 TRANSFAC yes 71049746
chr3 128390311 128390315 YY1 TRANSFAC yes 71049747
SNP sites on vista42376[chr3:128390113-128390338]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 128390162 rs184599964 T A,C
NR2C2
7021686
chr3 128390175 rs146091270 T C no 7021687
chr3 128390247 rs569666701 C G,T
BHLHE40 BHLHE41 MAX MLX MLXIPL MYC SREBF2 TFE3 TFEB TFEC USF1 USF2
7021688
Genes possibly regulated by vista42376[chr3:128390113-128390338]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 128290843 128294929 - C3orf27 ENSG00000198685.2 128294929 0.93 1.0 4054 4816
chr3 128338817 128399918 - RPN1 ENSG00000163902.7 128399918 0.61 1.0 4055 90420
chr3 128444965 128533639 + RAB7A ENSG00000075785.8 128444965 0.61 1.0 4056 45373
Expression level of Genes
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miRNAs possibly regulated by vista42376[chr3:128390113-128390338]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results