EnhancerDB
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  3. vista42379[chr3:128475272-128475670]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42379[chr3:128475272-128475670]
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Tissue distribution of vista42379
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Transcription factor that possibly regulate vista42379[chr3:128475272-128475670]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 128475273 128475280 NFATC2 JASPAR yes 5622484
chr3 128475273 128475280 NFATC2 JASPAR yes 71049802
chr3 128475283 128475299 POU4F2 JASPAR yes 5622485
chr3 128475283 128475299 POU4F2 JASPAR yes 71049803
chr3 128475301 128475314 SMAD2 JASPAR yes 5622486
chr3 128475301 128475314 SMAD2 JASPAR yes 71049804
chr3 128475372 128475375 MYB TRANSFAC yes 5622487
chr3 128475372 128475375 MYB TRANSFAC yes 71049805
chr3 128475393 128475409 SOX8 JASPAR yes 5622488
chr3 128475393 128475409 SOX8 JASPAR yes 71049806
chr3 128475401 128475410 SOX9 JASPAR yes 5622489
chr3 128475401 128475410 SOX9 JASPAR yes 71049807
chr3 128475422 128475428 MZF1 JASPAR yes 5622490
chr3 128475422 128475428 MZF1 JASPAR yes 71049808
chr3 128475433 128475439 HiNF-A TRANSFAC yes 5622491
chr3 128475433 128475439 HiNF-A TRANSFAC yes 71049809
chr3 128475499 128475502 MYB TRANSFAC yes 5622492
chr3 128475499 128475502 MYB TRANSFAC yes 71049810
chr3 128475505 128475510 GATA2 JASPAR yes 5622493
chr3 128475505 128475510 GATA2 JASPAR yes 71049811
chr3 128475530 128475546 RFX4 JASPAR yes 5622494
chr3 128475530 128475546 RFX4 JASPAR yes 71049812
chr3 128475543 128475558 FOXP1 JASPAR yes 5622495
chr3 128475543 128475558 FOXP1 JASPAR yes 71049813
chr3 128475546 128475557 FOXP2 JASPAR yes 5622496
chr3 128475546 128475557 FOXP2 JASPAR yes 71049814
chr3 128475547 128475555 FOXO3 JASPAR yes 5622497
chr3 128475547 128475555 FOXO3 JASPAR yes 71049815
chr3 128475550 128475556 HiNF-A TRANSFAC yes 5622498
chr3 128475550 128475556 HiNF-A TRANSFAC yes 71049816
chr3 128475569 128475582 SMAD2 JASPAR yes 5622499
chr3 128475569 128475582 SMAD2 JASPAR yes 71049817
chr3 128475572 128475582 TBR1 JASPAR yes 5622500
chr3 128475572 128475582 TBR1 JASPAR yes 71049818
chr3 128475572 128475583 TBX2 JASPAR yes 5622501
chr3 128475572 128475583 TBX2 JASPAR yes 71049819
chr3 128475574 128475582 MGA JASPAR yes 5622502
chr3 128475574 128475582 TBX15 JASPAR yes 5622503
chr3 128475574 128475582 TBX1 JASPAR yes 5622504
chr3 128475574 128475582 TBX4 JASPAR yes 5622505
chr3 128475574 128475582 TBX5 JASPAR yes 5622506
chr3 128475574 128475582 MGA JASPAR yes 71049820
chr3 128475574 128475582 TBX15 JASPAR yes 71049821
chr3 128475574 128475582 TBX1 JASPAR yes 71049822
chr3 128475574 128475582 TBX4 JASPAR yes 71049823
chr3 128475574 128475582 TBX5 JASPAR yes 71049824
chr3 128475576 128475587 FLI1 JASPAR yes 5622507
chr3 128475576 128475587 FLI1 JASPAR yes 71049825
chr3 128475576 128475589 ELF3 JASPAR yes 5622508
chr3 128475576 128475589 ELF3 JASPAR yes 71049826
chr3 128475577 128475587 ETV6 JASPAR yes 5622509
chr3 128475577 128475587 ETV6 JASPAR yes 71049827
chr3 128475577 128475588 ELF5 JASPAR yes 5622510
chr3 128475577 128475588 ELF5 JASPAR yes 71049828
chr3 128475577 128475589 EHF JASPAR yes 5622511
chr3 128475577 128475589 ELF1 JASPAR yes 5622512
chr3 128475577 128475589 ELF4 JASPAR yes 5622513
chr3 128475577 128475589 EHF JASPAR yes 71049829
chr3 128475577 128475589 ELF1 JASPAR yes 71049830
chr3 128475577 128475589 ELF4 JASPAR yes 71049831
chr3 128475577 128475590 ELF1 JASPAR yes 5622514
chr3 128475577 128475590 ELF1 JASPAR yes 71049832
chr3 128475577 128475591 SPI1 JASPAR yes 5622515
chr3 128475577 128475591 SPIC JASPAR yes 5622516
chr3 128475577 128475591 SPI1 JASPAR yes 71049833
chr3 128475577 128475591 SPIC JASPAR yes 71049834
chr3 128475578 128475585 SPI1 JASPAR yes 5622517
chr3 128475578 128475585 SPI1 JASPAR yes 71049835
chr3 128475578 128475586 EHF JASPAR yes 5622518
chr3 128475578 128475586 FEV JASPAR yes 5622519
chr3 128475578 128475586 EHF JASPAR yes 71049836
chr3 128475578 128475586 FEV JASPAR yes 71049837
chr3 128475585 128475590 H4TF1 TRANSFAC yes 5622520
chr3 128475585 128475590 H4TF1 TRANSFAC yes 71049838
chr3 128475585 128475596 CEBPB JASPAR yes 5622521
chr3 128475585 128475596 CEBPB JASPAR yes 71049839
chr3 128475586 128475597 CEBPA JASPAR yes 5622522
chr3 128475586 128475597 CEBPA JASPAR yes 71049840
chr3 128475600 128475606 TCF4 TRANSFAC yes 5622523
chr3 128475600 128475606 TCF4 TRANSFAC yes 71049841
chr3 128475605 128475620 NFYB JASPAR yes 5622524
chr3 128475605 128475620 NFYB JASPAR yes 71049842
chr3 128475608 128475626 NFYA JASPAR yes 5622525
chr3 128475608 128475626 NFYA JASPAR yes 71049843
chr3 128475612 128475616 H1TF2 TRANSFAC yes 5622526
chr3 128475612 128475616 NFE TRANSFAC yes 5622527
chr3 128475612 128475616 SRF TRANSFAC yes 5622528
chr3 128475612 128475616 H1TF2 TRANSFAC yes 71049844
chr3 128475612 128475616 NFE TRANSFAC yes 71049845
chr3 128475612 128475616 SRF TRANSFAC yes 71049846
chr3 128475612 128475627 FOXP1 JASPAR yes 5622529
chr3 128475612 128475627 FOXP1 JASPAR yes 71049847
chr3 128475613 128475624 FOXA1 JASPAR yes 5622530
chr3 128475613 128475624 FOXA1 JASPAR yes 71049848
chr3 128475615 128475626 FOXP2 JASPAR yes 5622531
chr3 128475615 128475626 FOXP2 JASPAR yes 71049849
chr3 128475616 128475624 FOXO3 JASPAR yes 5622532
chr3 128475616 128475624 FOXO3 JASPAR yes 71049850
chr3 128475640 128475656 SRF JASPAR yes 5622533
chr3 128475640 128475656 SRF JASPAR yes 71049851
chr3 128475643 128475655 SRF JASPAR yes 5622534
chr3 128475643 128475655 SRF JASPAR yes 71049852
chr3 128475646 128475650 YY1 TRANSFAC yes 5622535
chr3 128475646 128475650 YY1 TRANSFAC yes 71049853
chr3 128475659 128475669 REL JASPAR yes 5622536
chr3 128475659 128475669 REL JASPAR yes 71049854
chr3 128475659 128475670 NFKB1 JASPAR yes 5622537
chr3 128475659 128475670 NFKB1 JASPAR yes 71049855
SNP sites on vista42379[chr3:128475272-128475670]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 128475293 rs35439439 A G
POU4F2
7022203
chr3 128475400 rs148861727 T A
SOX8
7022204
chr3 128475430 rs115300833 A G no 7022205
chr3 128475528 rs114732367 T A no 7022206
chr3 128475662 rs73198819 G A
NFKB1 REL
7022207
Genes possibly regulated by vista42379[chr3:128475272-128475670]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 128338817 128399918 - RPN1 ENSG00000163902.7 128399918 0.61 1.0 4055 24646
chr3 128444965 128533639 + RAB7A ENSG00000075785.8 128444965 0.61 1.0 4056 69693
Expression level of Genes
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miRNAs possibly regulated by vista42379[chr3:128475272-128475670]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results