EnhancerDB
  1. Home
  2. Enhancers
  3. vista4238[chr1:184924828-184925180]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4238[chr1:184924828-184925180]
Back to top
Tissue distribution of vista4238
Back to top
Transcription factor that possibly regulate vista4238[chr1:184924828-184925180]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 184924818 184924829 FOXH1 JASPAR yes 33784329
chr1 184924818 184924829 FOXH1 JASPAR yes 118415610
chr1 184924822 184924828 ZNF354C JASPAR yes 33784330
chr1 184924822 184924828 ZNF354C JASPAR yes 118415611
chr1 184924823 184924832 NKX3-2 JASPAR yes 33784331
chr1 184924823 184924832 NKX3-2 JASPAR yes 118415612
chr1 184924823 184924833 NKX2-3 JASPAR yes 33784332
chr1 184924823 184924833 NKX2-3 JASPAR yes 118415613
chr1 184924824 184924832 ISL2 JASPAR yes 33784333
chr1 184924824 184924832 ISL2 JASPAR yes 118415614
chr1 184924824 184924833 NKX2-8 JASPAR yes 33784334
chr1 184924824 184924833 NKX2-8 JASPAR yes 118415615
chr1 184924848 184924853 MYB TRANSFAC yes 33784335
chr1 184924848 184924853 MYB TRANSFAC yes 118415616
chr1 184924852 184924866 NR2F1 JASPAR yes 33784336
chr1 184924852 184924866 NR2F1 JASPAR yes 118415617
chr1 184924861 184924876 SCRT1 JASPAR yes 33784337
chr1 184924861 184924876 SCRT1 JASPAR yes 118415618
chr1 184924875 184924892 RXRA JASPAR yes 33784338
chr1 184924875 184924892 RXRA JASPAR yes 118415619
chr1 184924881 184924885 TEAD2 TRANSFAC yes 33784339
chr1 184924881 184924885 TEAD2 TRANSFAC yes 118415620
chr1 184924881 184924886 TBP TRANSFAC yes 33784340
chr1 184924881 184924886 TBP TRANSFAC yes 118415621
chr1 184924883 184924898 PRDM1 JASPAR yes 33784341
chr1 184924883 184924898 PRDM1 JASPAR yes 118415622
chr1 184924885 184924890 ETS2 TRANSFAC yes 33784342
chr1 184924885 184924890 ETS2 TRANSFAC yes 118415623
chr1 184924890 184924902 IRF1 JASPAR yes 33784343
chr1 184924890 184924902 IRF1 JASPAR yes 118415624
chr1 184924891 184924912 IRF1 JASPAR yes 33784344
chr1 184924891 184924912 IRF1 JASPAR yes 118415625
chr1 184924895 184924906 CDX2 JASPAR yes 33784345
chr1 184924895 184924906 CDX2 JASPAR yes 118415626
chr1 184924896 184924907 HOXA10 JASPAR yes 33784346
chr1 184924896 184924907 HOXA10 JASPAR yes 118415627
chr1 184924897 184924906 CDX1 JASPAR yes 33784347
chr1 184924897 184924906 CDX1 JASPAR yes 118415628
chr1 184924897 184924907 HOXA13 JASPAR yes 33784348
chr1 184924897 184924907 HOXB13 JASPAR yes 33784349
chr1 184924897 184924907 HOXD13 JASPAR yes 33784350
chr1 184924897 184924907 HOXA13 JASPAR yes 118415629
chr1 184924897 184924907 HOXB13 JASPAR yes 118415630
chr1 184924897 184924907 HOXD13 JASPAR yes 118415631
chr1 184924897 184924912 FOXP1 JASPAR yes 33784351
chr1 184924897 184924912 FOXP1 JASPAR yes 118415632
chr1 184924911 184924916 GATA2 JASPAR yes 33784352
chr1 184924911 184924916 GATA2 JASPAR yes 118415633
chr1 184924919 184924936 BCL6B JASPAR yes 33784353
chr1 184924919 184924936 BCL6B JASPAR yes 118415634
chr1 184924922 184924929 MEIS1 JASPAR yes 33784354
chr1 184924922 184924929 MEIS1 JASPAR yes 118415635
chr1 184924922 184924930 MEIS2 JASPAR yes 33784355
chr1 184924922 184924930 MEIS3 JASPAR yes 33784356
chr1 184924922 184924930 MEIS2 JASPAR yes 118415636
chr1 184924922 184924930 MEIS3 JASPAR yes 118415637
chr1 184924933 184924939 NFIC JASPAR yes 33784357
chr1 184924933 184924939 NFIC JASPAR yes 118415638
chr1 184924935 184924939 H1TF2 TRANSFAC yes 33784358
chr1 184924935 184924939 NFE TRANSFAC yes 33784359
chr1 184924935 184924939 SRF TRANSFAC yes 33784360
chr1 184924935 184924939 H1TF2 TRANSFAC yes 118415639
chr1 184924935 184924939 NFE TRANSFAC yes 118415640
chr1 184924935 184924939 SRF TRANSFAC yes 118415641
chr1 184924937 184924947 NFATC3 JASPAR yes 33784361
chr1 184924937 184924947 NFATC3 JASPAR yes 118415642
chr1 184924948 184924954 SOX10 JASPAR yes 33784362
chr1 184924948 184924954 SOX10 JASPAR yes 118415643
chr1 184924953 184924971 TP63 JASPAR yes 33784363
chr1 184924953 184924971 TP63 JASPAR yes 118415644
chr1 184924957 184924965 TBX5 JASPAR yes 33784364
chr1 184924957 184924965 TBX5 JASPAR yes 118415645
chr1 184924971 184924989 RARA JASPAR yes 33784365
chr1 184924971 184924989 RARA JASPAR yes 118415646
chr1 184924985 184924989 LFA1 TRANSFAC yes 33784366
chr1 184924985 184924989 LFA1 TRANSFAC yes 118415647
chr1 184924988 184925002 POU4F1 JASPAR yes 33784367
chr1 184924988 184925002 POU4F1 JASPAR yes 118415648
chr1 184924998 184925017 CTCF JASPAR yes 33784368
chr1 184924998 184925017 CTCF JASPAR yes 118415649
chr1 184925002 184925017 TFAP2C JASPAR yes 33784369
chr1 184925002 184925017 TFAP2C JASPAR yes 118415650
chr1 184925011 184925026 TFAP2C JASPAR yes 33784370
chr1 184925011 184925026 TFAP2C JASPAR yes 118415651
chr1 184925018 184925035 NR3C1 JASPAR yes 33784371
chr1 184925018 184925035 NR3C2 JASPAR yes 33784372
chr1 184925018 184925035 NR3C1 JASPAR yes 118415652
chr1 184925018 184925035 NR3C2 JASPAR yes 118415653
chr1 184925029 184925040 GCM1 JASPAR yes 33784373
chr1 184925029 184925040 GCM1 JASPAR yes 118415654
chr1 184925029 184925044 RUNX2 JASPAR yes 33784374
chr1 184925029 184925044 RUNX2 JASPAR yes 118415655
chr1 184925030 184925040 GCM2 JASPAR yes 33784375
chr1 184925030 184925040 GCM2 JASPAR yes 118415656
chr1 184925036 184925046 GSC2 JASPAR yes 33784376
chr1 184925036 184925046 GSC2 JASPAR yes 118415657
chr1 184925037 184925045 OTX2 JASPAR yes 33784377
chr1 184925037 184925045 OTX2 JASPAR yes 118415658
chr1 184925048 184925052 NFE TRANSFAC yes 33784378
chr1 184925048 184925052 NFE TRANSFAC yes 118415659
chr1 184925048 184925061 SMAD2 JASPAR yes 33784379
chr1 184925048 184925061 SMAD2 JASPAR yes 118415660
chr1 184925052 184925056 NFE TRANSFAC yes 33784380
chr1 184925052 184925056 NFE TRANSFAC yes 118415661
chr1 184925052 184925057 GATA1 TRANSFAC yes 33784381
chr1 184925052 184925057 GATA1 TRANSFAC yes 118415662
chr1 184925052 184925058 GATA3 JASPAR yes 33784382
chr1 184925052 184925058 GATA3 JASPAR yes 118415663
chr1 184925056 184925065 THAP1 JASPAR yes 33784383
chr1 184925056 184925065 THAP1 JASPAR yes 118415664
chr1 184925056 184925070 GATA2 JASPAR yes 33784384
chr1 184925056 184925070 GATA2 JASPAR yes 118415665
chr1 184925057 184925073 SRF JASPAR yes 33784385
chr1 184925057 184925073 SRF JASPAR yes 118415666
chr1 184925060 184925068 GATA3 JASPAR yes 33784386
chr1 184925060 184925068 GATA5 JASPAR yes 33784387
chr1 184925060 184925068 GATA3 JASPAR yes 118415667
chr1 184925060 184925068 GATA5 JASPAR yes 118415668
chr1 184925086 184925095 NKX3-2 JASPAR yes 33784388
chr1 184925086 184925095 NKX3-2 JASPAR yes 118415669
chr1 184925098 184925104 SOX10 JASPAR yes 33784389
chr1 184925098 184925104 SOX10 JASPAR yes 118415670
chr1 184925128 184925137 VENTX JASPAR yes 33784390
chr1 184925128 184925137 VENTX JASPAR yes 118415671
chr1 184925131 184925135 YY1 TRANSFAC yes 33784391
chr1 184925131 184925135 YY1 TRANSFAC yes 118415672
chr1 184925136 184925140 ESR1 TRANSFAC yes 33784392
chr1 184925136 184925140 ESR1 TRANSFAC yes 118415673
chr1 184925140 184925150 GSC JASPAR yes 33784393
chr1 184925140 184925150 GSC JASPAR yes 118415674
chr1 184925141 184925149 RHOXF1 JASPAR yes 33784394
chr1 184925141 184925149 RHOXF1 JASPAR yes 118415675
chr1 184925141 184925150 PITX3 JASPAR yes 33784395
chr1 184925141 184925150 PITX3 JASPAR yes 118415676
chr1 184925143 184925164 IRF1 JASPAR yes 33784396
chr1 184925143 184925164 IRF1 JASPAR yes 118415677
chr1 184925145 184925160 PRDM1 JASPAR yes 33784397
chr1 184925145 184925160 PRDM1 JASPAR yes 118415678
chr1 184925146 184925150 YY1 TRANSFAC yes 33784398
chr1 184925146 184925150 YY1 TRANSFAC yes 118415679
chr1 184925149 184925170 IRF1 JASPAR yes 33784399
chr1 184925149 184925170 IRF1 JASPAR yes 118415680
chr1 184925153 184925173 RREB1 JASPAR yes 33784400
chr1 184925153 184925173 RREB1 JASPAR yes 118415681
chr1 184925155 184925170 FOXA1 JASPAR yes 33784401
chr1 184925155 184925170 FOXA1 JASPAR yes 118415682
chr1 184925156 184925162 TCF4 TRANSFAC yes 33784402
chr1 184925156 184925162 TCF4 TRANSFAC yes 118415683
chr1 184925156 184925168 FOXI1 JASPAR yes 33784403
chr1 184925156 184925168 FOXI1 JASPAR yes 118415684
chr1 184925156 184925171 FOXP1 JASPAR yes 33784404
chr1 184925156 184925171 FOXP1 JASPAR yes 118415685
chr1 184925157 184925169 FOXC2 JASPAR yes 33784405
chr1 184925157 184925169 FOXC2 JASPAR yes 118415686
chr1 184925159 184925170 FOXA1 JASPAR yes 33784406
chr1 184925159 184925170 FOXA1 JASPAR yes 118415687
chr1 184925160 184925175 FOXP1 JASPAR yes 33784407
chr1 184925160 184925175 FOXP1 JASPAR yes 118415688
chr1 184925161 184925172 FOXP2 JASPAR yes 33784408
chr1 184925161 184925172 FOXP2 JASPAR yes 118415689
chr1 184925161 184925173 FOXC2 JASPAR yes 33784409
chr1 184925161 184925173 FOXC2 JASPAR yes 118415690
chr1 184925161 184925176 STAT2 JASPAR yes 33784410
chr1 184925161 184925176 STAT2 JASPAR yes 118415691
chr1 184925162 184925177 FOXP1 JASPAR yes 33784411
chr1 184925162 184925177 FOXP1 JASPAR yes 118415692
chr1 184925164 184925179 FOXP1 JASPAR yes 33784412
chr1 184925164 184925179 FOXP1 JASPAR yes 118415693
chr1 184925167 184925182 MEF2C JASPAR yes 33784413
chr1 184925167 184925182 MEF2C JASPAR yes 118415694
SNP sites on vista4238[chr1:184924828-184925180]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 184924966 rs149440425 CAT C
TP63
790199
chr1 184925042 rs72739648 T C
GSC2 OTX2 RUNX2
790200
chr1 184925060 rs187733891 C T
GATA2 GATA3 GATA5 SMAD2 SRF THAP1
790201
chr1 184925070 rs546588542 C A
GATA2 SRF
790202
chr1 184925079 rs549287278 GCA G no 790203
chr1 184925084 rs76216619 G A,C no 790204
chr1 184925165 rs10682418 G GGTTT,GTTTGT,GTTTT
FOXA1 FOXC2 FOXI1 FOXP1 FOXP2 IRF1 RREB1 STAT2
790205
Genes possibly regulated by vista4238[chr1:184924828-184925180]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 184759858 184943682 - FAM129A ENSG00000135842.12 184943682 0.91 1.0 1649 81498
chr1 185014496 185071740 + RNF2 ENSG00000121481.6 185014496 0.75 0.99 1650 10684
Expression level of Genes
Back to top
miRNAs possibly regulated by vista4238[chr1:184924828-184925180]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results