EnhancerDB
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  3. vista42385[chr3:128589304-128589705]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42385[chr3:128589304-128589705]
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Tissue distribution of vista42385
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Transcription factor that possibly regulate vista42385[chr3:128589304-128589705]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 128589262 128589532 USF1 UCSC Txn Factor no Conserved 108530327
chr3 128589308 128589312 NFE TRANSFAC yes 5632308
chr3 128589308 128589312 NFE TRANSFAC yes 71050046
chr3 128589308 128589313 GATA1 TRANSFAC yes 5632309
chr3 128589308 128589313 GATA1 TRANSFAC yes 71050047
chr3 128589308 128589314 GATA3 JASPAR yes 5632310
chr3 128589308 128589314 GATA3 JASPAR yes 71050048
chr3 128589310 128589324 E2F7 JASPAR yes 5632311
chr3 128589310 128589324 E2F7 JASPAR yes 71050049
chr3 128589311 128589323 E2F8 JASPAR yes 5632312
chr3 128589311 128589323 E2F8 JASPAR yes 71050050
chr3 128589340 128589356 RFX2 JASPAR yes 5632313
chr3 128589340 128589356 RFX3 JASPAR yes 5632314
chr3 128589340 128589356 RFX4 JASPAR yes 5632315
chr3 128589340 128589356 RFX5 JASPAR yes 5632316
chr3 128589340 128589356 RFX2 JASPAR yes 71050051
chr3 128589340 128589356 RFX3 JASPAR yes 71050052
chr3 128589340 128589356 RFX4 JASPAR yes 71050053
chr3 128589340 128589356 RFX5 JASPAR yes 71050054
chr3 128589341 128589360 RFX2 JASPAR yes 5632317
chr3 128589341 128589360 RFX2 JASPAR yes 71050055
chr3 128589342 128589347 GATA2 JASPAR yes 5632318
chr3 128589342 128589347 GATA2 JASPAR yes 71050056
chr3 128589343 128589358 RFX5 JASPAR yes 5632319
chr3 128589343 128589358 RFX5 JASPAR yes 71050057
chr3 128589358 128589369 USF1 JASPAR yes 5632320
chr3 128589358 128589369 USF2 JASPAR yes 5632321
chr3 128589358 128589369 USF1 JASPAR yes 71050058
chr3 128589358 128589369 USF2 JASPAR yes 71050059
chr3 128589359 128589369 TFE3 JASPAR yes 5632322
chr3 128589359 128589369 TFEB JASPAR yes 5632323
chr3 128589359 128589369 TFEC JASPAR yes 5632324
chr3 128589359 128589369 TFE3 JASPAR yes 71050060
chr3 128589359 128589369 TFEB JASPAR yes 71050061
chr3 128589359 128589369 TFEC JASPAR yes 71050062
chr3 128589359 128589370 USF1 JASPAR yes 5632325
chr3 128589359 128589370 USF1 JASPAR yes 71050063
chr3 128589361 128589374 NR2F1 JASPAR yes 5632326
chr3 128589361 128589374 NR2F1 JASPAR yes 71050064
chr3 128589365 128589373 CREB1 JASPAR yes 5632327
chr3 128589365 128589373 CREB1 JASPAR yes 71050065
chr3 128589372 128589387 NFYB JASPAR yes 5632328
chr3 128589372 128589387 NFYB JASPAR yes 71050066
chr3 128589374 128589390 NFYA JASPAR yes 5632329
chr3 128589374 128589390 NFYA JASPAR yes 71050067
chr3 128589375 128589393 NFYA JASPAR yes 5632330
chr3 128589375 128589393 NFYA JASPAR yes 71050068
chr3 128589379 128589383 H1TF2 TRANSFAC yes 5632331
chr3 128589379 128589383 NFE TRANSFAC yes 5632332
chr3 128589379 128589383 SRF TRANSFAC yes 5632333
chr3 128589379 128589383 H1TF2 TRANSFAC yes 71050069
chr3 128589379 128589383 NFE TRANSFAC yes 71050070
chr3 128589379 128589383 SRF TRANSFAC yes 71050071
chr3 128589391 128589411 RREB1 JASPAR yes 5632334
chr3 128589391 128589411 RREB1 JASPAR yes 71050072
chr3 128589408 128589424 NFYA JASPAR yes 5632335
chr3 128589408 128589424 NFYA JASPAR yes 71050073
chr3 128589411 128589426 NFYB JASPAR yes 5632336
chr3 128589411 128589426 NFYB JASPAR yes 71050074
chr3 128589413 128589418 NFY TRANSFAC yes 5632337
chr3 128589413 128589418 NFY TRANSFAC yes 71050075
chr3 128589415 128589428 SMAD2 JASPAR yes 5632338
chr3 128589415 128589428 SMAD2 JASPAR yes 71050076
chr3 128589420 128589423 MYB TRANSFAC yes 5632339
chr3 128589420 128589423 MYB TRANSFAC yes 71050077
chr3 128589420 128589428 MGA JASPAR yes 5632340
chr3 128589420 128589428 TBX15 JASPAR yes 5632341
chr3 128589420 128589428 TBX1 JASPAR yes 5632342
chr3 128589420 128589428 TBX4 JASPAR yes 5632343
chr3 128589420 128589428 TBX5 JASPAR yes 5632344
chr3 128589420 128589428 MGA JASPAR yes 71050078
chr3 128589420 128589428 TBX15 JASPAR yes 71050079
chr3 128589420 128589428 TBX1 JASPAR yes 71050080
chr3 128589420 128589428 TBX4 JASPAR yes 71050081
chr3 128589420 128589428 TBX5 JASPAR yes 71050082
chr3 128589421 128589431 FIGLA JASPAR yes 5632345
chr3 128589421 128589431 ID4 JASPAR yes 5632346
chr3 128589421 128589431 TCF3 JASPAR yes 5632347
chr3 128589421 128589431 TCF4 JASPAR yes 5632348
chr3 128589421 128589431 FIGLA JASPAR yes 71050083
chr3 128589421 128589431 ID4 JASPAR yes 71050084
chr3 128589421 128589431 TCF3 JASPAR yes 71050085
chr3 128589421 128589431 TCF4 JASPAR yes 71050086
chr3 128589423 128589428 USF2 TRANSFAC yes 5632349
chr3 128589423 128589428 USF2 TRANSFAC yes 71050087
chr3 128589425 128589434 HIC2 JASPAR yes 5632350
chr3 128589425 128589434 HIC2 JASPAR yes 71050088
chr3 128589428 128589432 LFA1 TRANSFAC yes 5632351
chr3 128589428 128589432 LFA1 TRANSFAC yes 71050089
chr3 128589429 128589439 TFEB JASPAR yes 5632352
chr3 128589429 128589439 TFEC JASPAR yes 5632353
chr3 128589429 128589439 TFEB JASPAR yes 71050090
chr3 128589429 128589439 TFEC JASPAR yes 71050091
chr3 128589429 128589440 USF1 JASPAR yes 5632354
chr3 128589429 128589440 USF2 JASPAR yes 5632355
chr3 128589429 128589440 USF1 JASPAR yes 71050092
chr3 128589429 128589440 USF2 JASPAR yes 71050093
chr3 128589431 128589446 NFYB JASPAR yes 5632356
chr3 128589431 128589446 NFYB JASPAR yes 71050094
chr3 128589433 128589449 NFYA JASPAR yes 5632357
chr3 128589433 128589449 NFYA JASPAR yes 71050095
chr3 128589434 128589452 NFYA JASPAR yes 5632358
chr3 128589434 128589452 NFYA JASPAR yes 71050096
chr3 128589438 128589442 H1TF2 TRANSFAC yes 5632359
chr3 128589438 128589442 NFE TRANSFAC yes 5632360
chr3 128589438 128589442 SRF TRANSFAC yes 5632361
chr3 128589438 128589442 H1TF2 TRANSFAC yes 71050097
chr3 128589438 128589442 NFE TRANSFAC yes 71050098
chr3 128589438 128589442 SRF TRANSFAC yes 71050099
chr3 128589442 128589460 ESR1 JASPAR yes 5632362
chr3 128589442 128589460 ESR1 JASPAR yes 71050100
chr3 128589444 128589459 HNF4G JASPAR yes 5632363
chr3 128589444 128589459 NR2C2 JASPAR yes 5632364
chr3 128589444 128589459 HNF4G JASPAR yes 71050101
chr3 128589444 128589459 NR2C2 JASPAR yes 71050102
chr3 128589445 128589459 NR2F1 JASPAR yes 5632365
chr3 128589445 128589459 RXRB JASPAR yes 5632366
chr3 128589445 128589459 RXRG JASPAR yes 5632367
chr3 128589445 128589459 NR2F1 JASPAR yes 71050103
chr3 128589445 128589459 RXRB JASPAR yes 71050104
chr3 128589445 128589459 RXRG JASPAR yes 71050105
chr3 128589445 128589460 HNF4A JASPAR yes 5632368
chr3 128589445 128589460 HNF4A JASPAR yes 71050106
chr3 128589450 128589463 NR2F1 JASPAR yes 5632369
chr3 128589450 128589463 NR2F1 JASPAR yes 71050107
chr3 128589454 128589458 ESR1 TRANSFAC yes 5632370
chr3 128589454 128589458 ESR1 TRANSFAC yes 71050108
chr3 128589490 128589510 RREB1 JASPAR yes 5632371
chr3 128589490 128589510 RREB1 JASPAR yes 71050109
chr3 128589491 128589495 YY1 TRANSFAC yes 5632372
chr3 128589491 128589495 YY1 TRANSFAC yes 71050110
chr3 128589501 128589521 RREB1 JASPAR yes 5632373
chr3 128589501 128589521 RREB1 JASPAR yes 71050111
chr3 128589504 128589516 INSM1 JASPAR yes 5632374
chr3 128589504 128589516 INSM1 JASPAR yes 71050112
chr3 128589508 128589523 RUNX2 JASPAR yes 5632375
chr3 128589508 128589523 RUNX2 JASPAR yes 71050113
chr3 128589518 128589530 YY1 JASPAR yes 5632376
chr3 128589518 128589530 YY1 JASPAR yes 71050114
chr3 128589521 128589527 YY1 JASPAR yes 5632377
chr3 128589521 128589527 YY1 JASPAR yes 71050115
chr3 128589528 128589539 ESRRA JASPAR yes 5632378
chr3 128589528 128589539 ESRRA JASPAR yes 71050116
chr3 128589540 128589551 NFKB1 JASPAR yes 5632379
chr3 128589540 128589551 NFKB1 JASPAR yes 71050117
chr3 128589541 128589551 RELA JASPAR yes 5632380
chr3 128589541 128589551 REL JASPAR yes 5632381
chr3 128589541 128589551 RELA JASPAR yes 71050118
chr3 128589541 128589551 REL JASPAR yes 71050119
chr3 128589546 128589555 ZEB1 JASPAR yes 5632382
chr3 128589546 128589555 ZEB1 JASPAR yes 71050120
chr3 128589546 128589558 NHLH1 JASPAR yes 5632383
chr3 128589546 128589558 NHLH1 JASPAR yes 71050121
chr3 128589549 128589554 USF2 TRANSFAC yes 5632384
chr3 128589549 128589554 USF2 TRANSFAC yes 71050122
chr3 128589563 128589569 ZNF354C JASPAR yes 5632385
chr3 128589563 128589569 ZNF354C JASPAR yes 71050123
chr3 128589574 128589579 ETS2 TRANSFAC yes 5632386
chr3 128589574 128589579 ETS2 TRANSFAC yes 71050124
chr3 128589577 128589592 AR JASPAR yes 5632387
chr3 128589577 128589592 AR JASPAR yes 71050125
chr3 128589585 128589599 RXRB JASPAR yes 5632388
chr3 128589585 128589599 RXRG JASPAR yes 5632389
chr3 128589585 128589599 RXRB JASPAR yes 71050126
chr3 128589585 128589599 RXRG JASPAR yes 71050127
chr3 128589594 128589611 RXRA JASPAR yes 5632390
chr3 128589594 128589611 RXRA JASPAR yes 71050128
chr3 128589604 128589619 ESR2 JASPAR yes 5632391
chr3 128589604 128589619 ESR2 JASPAR yes 71050129
chr3 128589610 128589624 BATF3 JASPAR yes 5632392
chr3 128589610 128589624 BATF3 JASPAR yes 71050130
chr3 128589616 128589620 YY1 TRANSFAC yes 5632393
chr3 128589616 128589620 YY1 TRANSFAC yes 71050131
chr3 128589628 128589638 HEY1 JASPAR yes 5632394
chr3 128589628 128589638 MAX JASPAR yes 5632395
chr3 128589628 128589638 MNT JASPAR yes 5632396
chr3 128589628 128589638 HEY1 JASPAR yes 71050132
chr3 128589628 128589638 MAX JASPAR yes 71050133
chr3 128589628 128589638 MNT JASPAR yes 71050134
chr3 128589629 128589636 USF1 JASPAR yes 5632397
chr3 128589629 128589636 USF1 JASPAR yes 71050135
chr3 128589630 128589635 MYC TRANSFAC yes 5632398
chr3 128589630 128589635 USF1 TRANSFAC yes 5632399
chr3 128589630 128589635 USF2 TRANSFAC yes 5632400
chr3 128589630 128589635 MYC TRANSFAC yes 71050136
chr3 128589630 128589635 USF1 TRANSFAC yes 71050137
chr3 128589630 128589635 USF2 TRANSFAC yes 71050138
chr3 128589640 128589660 PPARG JASPAR yes 5632401
chr3 128589640 128589660 PPARG JASPAR yes 71050139
chr3 128589650 128589662 INSM1 JASPAR yes 5632402
chr3 128589650 128589662 INSM1 JASPAR yes 71050140
chr3 128589652 128589667 HSF1 JASPAR yes 5632403
chr3 128589652 128589667 HSF1 JASPAR yes 71050141
chr3 128589686 128589696 RORA JASPAR yes 5632404
chr3 128589686 128589696 RORA JASPAR yes 71050142
chr3 128589687 128589698 ESRRA JASPAR yes 5632405
chr3 128589687 128589698 ESRRB JASPAR yes 5632406
chr3 128589687 128589698 ESRRA JASPAR yes 71050143
chr3 128589687 128589698 ESRRB JASPAR yes 71050144
chr3 128589689 128589697 NR4A2 JASPAR yes 5632407
chr3 128589689 128589697 NR4A2 JASPAR yes 71050145
chr3 128589691 128589695 ESR1 TRANSFAC yes 5632408
chr3 128589691 128589695 ESR1 TRANSFAC yes 71050146
chr3 128589693 128589712 CTCF JASPAR yes 5632409
chr3 128589693 128589712 CTCF JASPAR yes 71050147
chr3 128589700 128589713 NR2F1 JASPAR yes 5632410
chr3 128589700 128589713 NR2F1 JASPAR yes 71050148
chr3 128589704 128589708 ESR1 TRANSFAC yes 5632411
chr3 128589704 128589708 ESR1 TRANSFAC yes 71050149
chr3 128589705 128589716 NRL JASPAR yes 5632412
chr3 128589705 128589716 NRL JASPAR yes 71050150
SNP sites on vista42385[chr3:128589304-128589705]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 128589345 rs16851871 T A,C,G
GATA2 RFX2 RFX3 RFX4 RFX5 USF1
7023188
chr3 128589359 rs728839 A G
RFX2 TFE3 TFEB TFEC USF1 USF2
7023189
chr3 128589431 rs113477265 G A,T
FIGLA HIC2 ID4 LFA1 NFYB TCF3 TCF4 TFEB TFEC USF1 USF2
7023190
chr3 128589654 rs78697944 C T
HSF1 INSM1 PPARG
7023191
Genes possibly regulated by vista42385[chr3:128589304-128589705]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 128598439 128634910 + ACAD9 ENSG00000177646.13 128598439 0.55 1.0 4057 91266
Expression level of Genes
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miRNAs possibly regulated by vista42385[chr3:128589304-128589705]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results