EnhancerDB
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  3. vista42388[chr3:128745839-128746109]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42388[chr3:128745839-128746109]
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Tissue distribution of vista42388
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Transcription factor that possibly regulate vista42388[chr3:128745839-128746109]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 128745517 128746385 POLR2A UCSC Txn Factor no Conserved 108530329
chr3 128745733 128746231 MAX UCSC Txn Factor no Conserved 108530330
chr3 128745790 128746208 E2F6 UCSC Txn Factor no Conserved 108530331
chr3 128745836 128746200 NFYB UCSC Txn Factor no Conserved 108530332
chr3 128745842 128746131 ELF1 UCSC Txn Factor no Conserved 108530333
chr3 128745919 128746533 CTCF UCSC Txn Factor no Conserved 108530334
chr3 128745843 128745847 H4TF2 TRANSFAC yes 5638074
chr3 128745843 128745847 H4TF2 TRANSFAC yes 71050220
chr3 128745847 128745861 STAT1 JASPAR yes 5638075
chr3 128745847 128745861 STAT1 JASPAR yes 71050221
chr3 128745854 128745868 BATF3 JASPAR yes 5638076
chr3 128745854 128745868 BATF3 JASPAR yes 71050222
chr3 128745875 128745879 NFE TRANSFAC yes 5638077
chr3 128745875 128745879 NFE TRANSFAC yes 71050223
chr3 128745875 128745880 GATA1 TRANSFAC yes 5638078
chr3 128745875 128745880 GATA1 TRANSFAC yes 71050224
chr3 128745875 128745881 GATA3 JASPAR yes 5638079
chr3 128745875 128745881 GATA3 JASPAR yes 71050225
chr3 128745883 128745895 INSM1 JASPAR yes 5638080
chr3 128745883 128745895 INSM1 JASPAR yes 71050226
chr3 128745920 128745933 ELF3 JASPAR yes 5638081
chr3 128745920 128745933 ELF3 JASPAR yes 71050227
chr3 128745921 128745933 EHF JASPAR yes 5638082
chr3 128745921 128745933 EHF JASPAR yes 71050228
chr3 128745921 128745935 SPI1 JASPAR yes 5638083
chr3 128745921 128745935 SPI1 JASPAR yes 71050229
chr3 128745922 128745933 E2F4 JASPAR yes 5638084
chr3 128745922 128745933 E2F6 JASPAR yes 5638085
chr3 128745922 128745933 E2F4 JASPAR yes 71050230
chr3 128745922 128745933 E2F6 JASPAR yes 71050231
chr3 128745923 128745934 E2F1 JASPAR yes 5638086
chr3 128745923 128745934 E2F1 JASPAR yes 71050232
chr3 128745923 128745940 PAX1 JASPAR yes 5638087
chr3 128745923 128745940 PAX9 JASPAR yes 5638088
chr3 128745923 128745940 PAX1 JASPAR yes 71050233
chr3 128745923 128745940 PAX9 JASPAR yes 71050234
chr3 128745924 128745943 PAX5 JASPAR yes 5638089
chr3 128745924 128745943 PAX5 JASPAR yes 71050235
chr3 128745937 128745941 ESR1 TRANSFAC yes 5638090
chr3 128745937 128745941 ESR1 TRANSFAC yes 71050236
chr3 128745950 128745965 TFAP2C JASPAR yes 5638091
chr3 128745950 128745965 TFAP2C JASPAR yes 71050237
chr3 128745952 128745964 TFAP2A JASPAR yes 5638092
chr3 128745952 128745964 TFAP2B JASPAR yes 5638093
chr3 128745952 128745964 TFAP2C JASPAR yes 5638094
chr3 128745952 128745964 TFAP2A JASPAR yes 71050238
chr3 128745952 128745964 TFAP2B JASPAR yes 71050239
chr3 128745952 128745964 TFAP2C JASPAR yes 71050240
chr3 128745952 128745967 TFAP2A JASPAR yes 5638095
chr3 128745952 128745967 TFAP2C JASPAR yes 5638096
chr3 128745952 128745967 TFAP2A JASPAR yes 71050241
chr3 128745952 128745967 TFAP2C JASPAR yes 71050242
chr3 128745953 128745964 TFAP2B JASPAR yes 5638097
chr3 128745953 128745964 TFAP2B JASPAR yes 71050243
chr3 128745964 128745975 NRL JASPAR yes 5638098
chr3 128745964 128745975 NRL JASPAR yes 71050244
chr3 128745973 128745983 ELK1 JASPAR yes 5638099
chr3 128745973 128745983 ELK1 JASPAR yes 71050245
chr3 128745975 128745985 ERF JASPAR yes 5638100
chr3 128745975 128745985 ERG JASPAR yes 5638101
chr3 128745975 128745985 ETS1 JASPAR yes 5638102
chr3 128745975 128745985 FLI1 JASPAR yes 5638103
chr3 128745975 128745985 ERF JASPAR yes 71050246
chr3 128745975 128745985 ERG JASPAR yes 71050247
chr3 128745975 128745985 ETS1 JASPAR yes 71050248
chr3 128745975 128745985 FLI1 JASPAR yes 71050249
chr3 128745975 128745986 ELK4 JASPAR yes 5638104
chr3 128745975 128745986 ELK4 JASPAR yes 71050250
chr3 128745977 128745983 ETS1 JASPAR yes 5638105
chr3 128745977 128745983 ETS1 JASPAR yes 71050251
chr3 128745982 128746002 TP63 JASPAR yes 5638106
chr3 128745982 128746002 TP63 JASPAR yes 71050252
chr3 128746012 128746028 NFYA JASPAR yes 5638107
chr3 128746012 128746028 NFYA JASPAR yes 71050253
chr3 128746033 128746045 TFAP2A JASPAR yes 5638108
chr3 128746033 128746045 TFAP2B JASPAR yes 5638109
chr3 128746033 128746045 TFAP2C JASPAR yes 5638110
chr3 128746033 128746045 TFAP2A JASPAR yes 71050254
chr3 128746033 128746045 TFAP2B JASPAR yes 71050255
chr3 128746033 128746045 TFAP2C JASPAR yes 71050256
chr3 128746034 128746043 TFAP2A JASPAR yes 5638111
chr3 128746034 128746043 TFAP2A JASPAR yes 71050257
chr3 128746048 128746063 RFX5 JASPAR yes 5638112
chr3 128746048 128746063 RFX5 JASPAR yes 71050258
chr3 128746059 128746064 SP1 TRANSFAC yes 5638113
chr3 128746059 128746064 SP1 TRANSFAC yes 71050259
chr3 128746065 128746076 NRL JASPAR yes 5638114
chr3 128746065 128746076 NRL JASPAR yes 71050260
chr3 128746065 128746077 POU2F1 JASPAR yes 5638115
chr3 128746065 128746077 POU2F1 JASPAR yes 71050261
chr3 128746065 128746078 POU3F3 JASPAR yes 5638116
chr3 128746065 128746078 POU3F3 JASPAR yes 71050262
chr3 128746065 128746079 POU1F1 JASPAR yes 5638117
chr3 128746065 128746079 POU1F1 JASPAR yes 71050263
chr3 128746066 128746078 POU3F1 JASPAR yes 5638118
chr3 128746066 128746078 POU3F2 JASPAR yes 5638119
chr3 128746066 128746078 POU3F1 JASPAR yes 71050264
chr3 128746066 128746078 POU3F2 JASPAR yes 71050265
chr3 128746067 128746076 POU3F4 JASPAR yes 5638120
chr3 128746067 128746076 POU5F1B JASPAR yes 5638121
chr3 128746067 128746076 POU3F4 JASPAR yes 71050266
chr3 128746067 128746076 POU5F1B JASPAR yes 71050267
chr3 128746081 128746094 NFKB1 JASPAR yes 5638122
chr3 128746081 128746094 NFKB2 JASPAR yes 5638123
chr3 128746081 128746094 NFKB1 JASPAR yes 71050268
chr3 128746081 128746094 NFKB2 JASPAR yes 71050269
chr3 128746082 128746093 NFKB1 JASPAR yes 5638124
chr3 128746082 128746093 NFKB1 JASPAR yes 71050270
chr3 128746085 128746100 ZBTB33 JASPAR yes 5638125
chr3 128746085 128746100 ZBTB33 JASPAR yes 71050271
chr3 128746087 128746100 TFAP2A JASPAR yes 5638126
chr3 128746087 128746100 TFAP2B JASPAR yes 5638127
chr3 128746087 128746100 TFAP2C JASPAR yes 5638128
chr3 128746087 128746100 TFAP2A JASPAR yes 71050272
chr3 128746087 128746100 TFAP2B JASPAR yes 71050273
chr3 128746087 128746100 TFAP2C JASPAR yes 71050274
chr3 128746088 128746103 ZIC4 JASPAR yes 5638129
chr3 128746088 128746103 ZIC4 JASPAR yes 71050275
chr3 128746089 128746103 ZIC1 JASPAR yes 5638130
chr3 128746089 128746103 ZIC1 JASPAR yes 71050276
chr3 128746090 128746099 TFAP2A JASPAR yes 5638131
chr3 128746090 128746099 TFAP2A JASPAR yes 71050277
chr3 128746095 128746100 SP1 TRANSFAC yes 5638132
chr3 128746095 128746100 SP1 TRANSFAC yes 71050278
SNP sites on vista42388[chr3:128745839-128746109]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 128745942 rs75789267 A G
CTCF E2F6 ELF1 MAX NFYB PAX5 POLR2A
7023795
chr3 128745982 rs550111966 AACGCCTGCAG A
CTCF E2F6 ELF1 ELK1 ELK4 ERF ERG ETS1 FLI1 MAX NFYB POLR2A TP63
7023796
Genes possibly regulated by vista42388[chr3:128745839-128746109]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 128628709 128721533 - KIAA1257 ENSG00000114656.6 128721533 0.95 1.0 4058 75694
chr3 128628717 128690173 - RP11-723O4.6 ENSG00000187695.6 128690173 0.95 1.0 4059 44334
chr3 128720472 128759585 + EFCC1 ENSG00000114654.6 128720472 0.85 1.0 4060 74633
chr3 128779610 128781249 + GP9 ENSG00000169704.4 128779610 0.98 0.0 4061 66499
chr3 128806412 128841644 - RAB43 ENSG00000172780.12 128841644 0.66 0.97 4062 4465
Expression level of Genes
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miRNAs possibly regulated by vista42388[chr3:128745839-128746109]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results