EnhancerDB
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  3. vista42395[chr3:128946609-128946967]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42395[chr3:128946609-128946967]
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Tissue distribution of vista42395
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Transcription factor that possibly regulate vista42395[chr3:128946609-128946967]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 128946604 128946610 YY1 JASPAR yes 5646988
chr3 128946604 128946610 YY1 JASPAR yes 71050537
chr3 128946620 128946630 NHLH1 JASPAR yes 5646989
chr3 128946620 128946630 NHLH1 JASPAR yes 71050538
chr3 128946641 128946651 TBX21 JASPAR yes 5646990
chr3 128946641 128946651 TBX21 JASPAR yes 71050539
chr3 128946641 128946652 TBX20 JASPAR yes 5646991
chr3 128946641 128946652 TBX20 JASPAR yes 71050540
chr3 128946641 128946654 EOMES JASPAR yes 5646992
chr3 128946641 128946654 EOMES JASPAR yes 71050541
chr3 128946642 128946650 MGA JASPAR yes 5646993
chr3 128946642 128946650 TBX1 JASPAR yes 5646994
chr3 128946642 128946650 MGA JASPAR yes 71050542
chr3 128946642 128946650 TBX1 JASPAR yes 71050543
chr3 128946651 128946654 MYB TRANSFAC yes 5646995
chr3 128946651 128946654 MYB TRANSFAC yes 71050544
chr3 128946660 128946671 FOXH1 JASPAR yes 5646996
chr3 128946660 128946671 FOXH1 JASPAR yes 71050545
chr3 128946678 128946683 ETS2 TRANSFAC yes 5646997
chr3 128946678 128946683 ETS2 TRANSFAC yes 71050546
chr3 128946698 128946715 ESR1 JASPAR yes 5646998
chr3 128946698 128946715 ESR1 JASPAR yes 71050547
chr3 128946710 128946723 POU2F2 JASPAR yes 5646999
chr3 128946710 128946723 POU2F2 JASPAR yes 71050548
chr3 128946739 128946753 STAT1 JASPAR yes 5647000
chr3 128946739 128946753 STAT1 JASPAR yes 71050549
chr3 128946739 128946754 STAT2 JASPAR yes 5647001
chr3 128946739 128946754 STAT2 JASPAR yes 71050550
chr3 128946740 128946746 HiNF-A TRANSFAC yes 5647002
chr3 128946740 128946746 HiNF-A TRANSFAC yes 71050551
chr3 128946740 128946752 IRF1 JASPAR yes 5647003
chr3 128946740 128946752 IRF1 JASPAR yes 71050552
chr3 128946747 128946767 RREB1 JASPAR yes 5647004
chr3 128946747 128946767 RREB1 JASPAR yes 71050553
chr3 128946776 128946797 ZNF263 JASPAR yes 5647005
chr3 128946776 128946797 ZNF263 JASPAR yes 71050554
chr3 128946781 128946802 IRF1 JASPAR yes 5647006
chr3 128946781 128946802 IRF1 JASPAR yes 71050555
chr3 128946826 128946840 NR2F1 JASPAR yes 5647007
chr3 128946826 128946840 NR2F1 JASPAR yes 71050556
chr3 128946837 128946851 EBF1 JASPAR yes 5647008
chr3 128946837 128946851 EBF1 JASPAR yes 71050557
chr3 128946839 128946850 EBF1 JASPAR yes 5647009
chr3 128946839 128946850 EBF1 JASPAR yes 71050558
chr3 128946844 128946865 ZNF263 JASPAR yes 5647010
chr3 128946844 128946865 ZNF263 JASPAR yes 71050559
chr3 128946849 128946855 HiNF-A TRANSFAC yes 5647011
chr3 128946849 128946855 HiNF-A TRANSFAC yes 71050560
chr3 128946854 128946874 RREB1 JASPAR yes 5647012
chr3 128946854 128946874 RREB1 JASPAR yes 71050561
chr3 128946856 128946861 SP1 TRANSFAC yes 5647013
chr3 128946856 128946861 SP1 TRANSFAC yes 71050562
chr3 128946867 128946879 PBX1 JASPAR yes 5647014
chr3 128946867 128946879 PBX1 JASPAR yes 71050563
chr3 128946870 128946891 ZNF263 JASPAR yes 5647015
chr3 128946870 128946891 ZNF263 JASPAR yes 71050564
chr3 128946874 128946882 EHF JASPAR yes 5647016
chr3 128946874 128946882 EHF JASPAR yes 71050565
chr3 128946877 128946888 FLI1 JASPAR yes 5647017
chr3 128946877 128946888 FLI1 JASPAR yes 71050566
chr3 128946878 128946883 ETS2 TRANSFAC yes 5647018
chr3 128946878 128946883 ETS2 TRANSFAC yes 71050567
chr3 128946878 128946886 FEV JASPAR yes 5647019
chr3 128946878 128946886 FEV JASPAR yes 71050568
chr3 128946887 128946902 TFAP2A JASPAR yes 5647020
chr3 128946887 128946902 TFAP2A JASPAR yes 71050569
chr3 128946888 128946899 TFAP2A JASPAR yes 5647021
chr3 128946888 128946899 TFAP2A JASPAR yes 71050570
chr3 128946899 128946905 PEA3 TRANSFAC yes 5647022
chr3 128946899 128946905 PEA3 TRANSFAC yes 71050571
chr3 128946900 128946908 FEV JASPAR yes 5647023
chr3 128946900 128946908 FEV JASPAR yes 71050572
chr3 128946904 128946925 IRF1 JASPAR yes 5647024
chr3 128946904 128946925 IRF1 JASPAR yes 71050573
chr3 128946905 128946926 IRF1 JASPAR yes 5647025
chr3 128946905 128946926 IRF1 JASPAR yes 71050574
chr3 128946906 128946927 IRF1 JASPAR yes 5647026
chr3 128946906 128946927 IRF1 JASPAR yes 71050575
chr3 128946907 128946922 FOXP1 JASPAR yes 5647027
chr3 128946907 128946922 FOXP1 JASPAR yes 71050576
chr3 128946907 128946928 IRF1 JASPAR yes 5647028
chr3 128946907 128946928 IRF1 JASPAR yes 71050577
chr3 128946908 128946929 IRF1 JASPAR yes 5647029
chr3 128946908 128946929 IRF1 JASPAR yes 71050578
chr3 128946909 128946924 FOXP1 JASPAR yes 5647030
chr3 128946909 128946924 FOXP1 JASPAR yes 71050579
chr3 128946909 128946930 IRF1 JASPAR yes 5647031
chr3 128946909 128946930 IRF1 JASPAR yes 71050580
chr3 128946910 128946925 FOXP1 JASPAR yes 5647032
chr3 128946910 128946925 FOXP1 JASPAR yes 71050581
chr3 128946910 128946931 IRF1 JASPAR yes 5647033
chr3 128946910 128946931 IRF1 JASPAR yes 71050582
chr3 128946911 128946926 FOXP1 JASPAR yes 5647034
chr3 128946911 128946926 FOXP1 JASPAR yes 71050583
chr3 128946911 128946932 IRF1 JASPAR yes 5647035
chr3 128946911 128946932 IRF1 JASPAR yes 71050584
chr3 128946912 128946927 FOXP1 JASPAR yes 5647036
chr3 128946912 128946927 FOXP1 JASPAR yes 71050585
chr3 128946912 128946933 IRF1 JASPAR yes 5647037
chr3 128946912 128946933 IRF1 JASPAR yes 71050586
chr3 128946913 128946928 FOXP1 JASPAR yes 5647038
chr3 128946913 128946928 FOXP1 JASPAR yes 71050587
chr3 128946913 128946934 IRF1 JASPAR yes 5647039
chr3 128946913 128946934 IRF1 JASPAR yes 71050588
chr3 128946914 128946929 FOXP1 JASPAR yes 5647040
chr3 128946914 128946929 FOXP1 JASPAR yes 71050589
chr3 128946914 128946935 IRF1 JASPAR yes 5647041
chr3 128946914 128946935 IRF1 JASPAR yes 71050590
chr3 128946915 128946930 FOXP1 JASPAR yes 5647042
chr3 128946915 128946930 FOXP1 JASPAR yes 71050591
chr3 128946916 128946931 FOXP1 JASPAR yes 5647043
chr3 128946916 128946931 FOXP1 JASPAR yes 71050592
chr3 128946917 128946932 FOXP1 JASPAR yes 5647044
chr3 128946917 128946932 FOXP1 JASPAR yes 71050593
chr3 128946918 128946933 FOXP1 JASPAR yes 5647045
chr3 128946918 128946933 FOXP1 JASPAR yes 71050594
chr3 128946919 128946934 FOXP1 JASPAR yes 5647046
chr3 128946919 128946934 FOXP1 JASPAR yes 71050595
chr3 128946920 128946935 FOXP1 JASPAR yes 5647047
chr3 128946920 128946935 FOXP1 JASPAR yes 71050596
chr3 128946921 128946936 FOXP1 JASPAR yes 5647048
chr3 128946921 128946936 FOXP1 JASPAR yes 71050597
chr3 128946922 128946937 FOXP1 JASPAR yes 5647049
chr3 128946922 128946937 FOXP1 JASPAR yes 71050598
chr3 128946952 128946956 NFE TRANSFAC yes 5647050
chr3 128946952 128946956 NFE TRANSFAC yes 71050599
SNP sites on vista42395[chr3:128946609-128946967]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 128946655 rs529958350 C T no 7024566
chr3 128946674 rs147057921 C A,T no 7024567
chr3 128946744 rs11914844 A G
HiNF-A IRF1 STAT1 STAT2
7024568
chr3 128946966 rs201640428 T TG no 7024569
Genes possibly regulated by vista42395[chr3:128946609-128946967]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 128806418 128879879 - ISY1-RAB43 ENSG00000261796.1 128879879 0.91 0.81 4063 33270
chr3 128846258 128880136 - ISY1 ENSG00000240682.5 128880136 0.67 0.98 4064 33527
chr3 128888327 128902765 - CNBP ENSG00000169714.12 128902765 0.59 1.0 4065 56156
chr3 128968449 128996614 + COPG1 ENSG00000181789.10 128968449 0.55 1.0 4066 78518
chr3 128997671 129025029 + HMCES ENSG00000183624.9 128997671 0.57 1.0 4067 49296
chr3 129033615 129035120 - H1FX ENSG00000184897.4 129035120 0.76 1.0 4068 11847
Expression level of Genes
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miRNAs possibly regulated by vista42395[chr3:128946609-128946967]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results