EnhancerDB
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  3. vista424[chr1:13917058-13917313]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista424[chr1:13917058-13917313]
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Tissue distribution of vista424
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Transcription factor that possibly regulate vista424[chr1:13917058-13917313]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 13917060 13917066 HiNF-A TRANSFAC yes 26851453
chr1 13917060 13917066 HiNF-A TRANSFAC yes 118233857
chr1 13917080 13917090 NFATC3 JASPAR yes 26851454
chr1 13917080 13917090 NFATC3 JASPAR yes 118233858
chr1 13917083 13917097 RORA JASPAR yes 26851455
chr1 13917083 13917097 RORA JASPAR yes 118233859
chr1 13917085 13917096 PHOX2A JASPAR yes 26851456
chr1 13917085 13917096 PHOX2A JASPAR yes 118233860
chr1 13917104 13917118 E2F7 JASPAR yes 26851457
chr1 13917104 13917118 E2F7 JASPAR yes 118233861
chr1 13917105 13917117 E2F8 JASPAR yes 26851458
chr1 13917105 13917117 E2F8 JASPAR yes 118233862
chr1 13917120 13917129 HIC2 JASPAR yes 26851459
chr1 13917120 13917129 HIC2 JASPAR yes 118233863
chr1 13917123 13917127 LFA1 TRANSFAC yes 26851460
chr1 13917123 13917127 LFA1 TRANSFAC yes 118233864
chr1 13917123 13917140 ZNF410 JASPAR yes 26851461
chr1 13917123 13917140 ZNF410 JASPAR yes 118233865
chr1 13917149 13917159 SP1 JASPAR yes 26851462
chr1 13917149 13917159 SP1 JASPAR yes 118233866
chr1 13917149 13917170 ZNF263 JASPAR yes 26851463
chr1 13917149 13917170 ZNF263 JASPAR yes 118233867
chr1 13917173 13917184 CEBPA JASPAR yes 26851464
chr1 13917173 13917184 CEBPA JASPAR yes 118233868
chr1 13917174 13917184 CEBPB JASPAR yes 26851465
chr1 13917174 13917184 CEBPE JASPAR yes 26851466
chr1 13917174 13917184 CEBPG JASPAR yes 26851467
chr1 13917174 13917184 CEBPB JASPAR yes 118233869
chr1 13917174 13917184 CEBPE JASPAR yes 118233870
chr1 13917174 13917184 CEBPG JASPAR yes 118233871
chr1 13917174 13917185 CEBPB JASPAR yes 26851468
chr1 13917174 13917185 CEBPB JASPAR yes 118233872
chr1 13917177 13917181 LFA1 TRANSFAC yes 26851469
chr1 13917177 13917181 LFA1 TRANSFAC yes 118233873
chr1 13917185 13917196 FLI1 JASPAR yes 26851470
chr1 13917185 13917196 FLI1 JASPAR yes 118233874
chr1 13917194 13917199 TFAP2A TRANSFAC yes 26851471
chr1 13917194 13917199 TFAP2A TRANSFAC yes 118233875
chr1 13917194 13917200 MZF1 JASPAR yes 26851472
chr1 13917194 13917200 MZF1 JASPAR yes 118233876
chr1 13917224 13917233 SP1 TRANSFAC yes 26851473
chr1 13917224 13917233 SP1 TRANSFAC yes 118233877
chr1 13917227 13917232 SP1 TRANSFAC yes 26851474
chr1 13917227 13917232 SP1 TRANSFAC yes 118233878
chr1 13917228 13917233 SP1 TRANSFAC yes 26851475
chr1 13917228 13917233 SP1 TRANSFAC yes 118233879
chr1 13917303 13917324 ZNF263 JASPAR yes 26851476
chr1 13917303 13917324 ZNF263 JASPAR yes 118233880
SNP sites on vista424[chr1:13917058-13917313]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 13917231 rs144915288 C T
SP1
89341
chr1 13917296 rs11805323 A G no 89342
Genes possibly regulated by vista424[chr1:13917058-13917313]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 13801445 13840543 - LRRC38 ENSG00000162494.5 13840543 0.98 1.0 198 23485
chr1 13909960 13944452 + PDPN ENSG00000162493.12 13909960 0.88 0.99 199 92902
Expression level of Genes
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miRNAs possibly regulated by vista424[chr1:13917058-13917313]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results