EnhancerDB
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  3. vista4240[chr1:184940554-184940925]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4240[chr1:184940554-184940925]
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Tissue distribution of vista4240
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Transcription factor that possibly regulate vista4240[chr1:184940554-184940925]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 184940546 184940567 LUN1 TRANSFAC yes 33786350
chr1 184940546 184940567 LUN1 TRANSFAC yes 118415736
chr1 184940582 184940592 RORA JASPAR yes 33786351
chr1 184940582 184940592 RORA JASPAR yes 118415737
chr1 184940583 184940594 ESRRA JASPAR yes 33786352
chr1 184940583 184940594 ESRRB JASPAR yes 33786353
chr1 184940583 184940594 ESRRA JASPAR yes 118415738
chr1 184940583 184940594 ESRRB JASPAR yes 118415739
chr1 184940583 184940596 NR2F1 JASPAR yes 33786354
chr1 184940583 184940596 NR2F1 JASPAR yes 118415740
chr1 184940585 184940593 NR4A2 JASPAR yes 33786355
chr1 184940585 184940593 NR4A2 JASPAR yes 118415741
chr1 184940587 184940591 ESR1 TRANSFAC yes 33786356
chr1 184940587 184940591 ESR1 TRANSFAC yes 118415742
chr1 184940599 184940611 YY1 JASPAR yes 33786357
chr1 184940599 184940611 YY1 JASPAR yes 118415743
chr1 184940602 184940608 YY1 JASPAR yes 33786358
chr1 184940602 184940608 YY1 JASPAR yes 118415744
chr1 184940617 184940628 CEBPB JASPAR yes 33786359
chr1 184940617 184940628 CEBPB JASPAR yes 118415745
chr1 184940618 184940631 NFKB1 JASPAR yes 33786360
chr1 184940618 184940631 NFKB2 JASPAR yes 33786361
chr1 184940618 184940631 NFKB1 JASPAR yes 118415746
chr1 184940618 184940631 NFKB2 JASPAR yes 118415747
chr1 184940634 184940649 MEF2C JASPAR yes 33786362
chr1 184940634 184940649 MEF2C JASPAR yes 118415748
chr1 184940635 184940650 MEF2A JASPAR yes 33786363
chr1 184940635 184940650 MEF2A JASPAR yes 118415749
chr1 184940636 184940648 MEF2A JASPAR yes 33786364
chr1 184940636 184940648 MEF2B JASPAR yes 33786365
chr1 184940636 184940648 MEF2D JASPAR yes 33786366
chr1 184940636 184940648 MEF2A JASPAR yes 118415750
chr1 184940636 184940648 MEF2B JASPAR yes 118415751
chr1 184940636 184940648 MEF2D JASPAR yes 118415752
chr1 184940652 184940673 REST JASPAR yes 33786367
chr1 184940652 184940673 REST JASPAR yes 118415753
chr1 184940653 184940672 REST JASPAR yes 33786368
chr1 184940653 184940672 REST JASPAR yes 118415754
chr1 184940655 184940664 HIC2 JASPAR yes 33786369
chr1 184940655 184940664 HIC2 JASPAR yes 118415755
chr1 184940657 184940667 SP1 JASPAR yes 33786370
chr1 184940657 184940667 SP1 JASPAR yes 118415756
chr1 184940658 184940662 LFA1 TRANSFAC yes 33786371
chr1 184940658 184940662 LFA1 TRANSFAC yes 118415757
chr1 184940727 184940741 RXRB JASPAR yes 33786372
chr1 184940727 184940741 RXRG JASPAR yes 33786373
chr1 184940727 184940741 RXRB JASPAR yes 118415758
chr1 184940727 184940741 RXRG JASPAR yes 118415759
chr1 184940734 184940751 ESR1 JASPAR yes 33786374
chr1 184940734 184940751 ESR1 JASPAR yes 118415760
chr1 184940793 184940797 NFE TRANSFAC yes 33786375
chr1 184940793 184940797 NFE TRANSFAC yes 118415761
chr1 184940813 184940817 YY1 TRANSFAC yes 33786376
chr1 184940813 184940817 YY1 TRANSFAC yes 118415762
chr1 184940815 184940825 RORA JASPAR yes 33786377
chr1 184940815 184940825 RORA JASPAR yes 118415763
chr1 184940820 184940824 ESR1 TRANSFAC yes 33786378
chr1 184940820 184940824 ESR1 TRANSFAC yes 118415764
chr1 184940848 184940851 MYB TRANSFAC yes 33786379
chr1 184940848 184940851 MYB TRANSFAC yes 118415765
chr1 184940849 184940859 NEUROG2 JASPAR yes 33786380
chr1 184940849 184940859 NEUROG2 JASPAR yes 118415766
chr1 184940854 184940865 NFE2L2 JASPAR yes 33786381
chr1 184940854 184940865 NFE2L2 JASPAR yes 118415767
chr1 184940863 184940873 TFEC JASPAR yes 33786382
chr1 184940863 184940873 TFEC JASPAR yes 118415768
chr1 184940863 184940874 USF1 JASPAR yes 33786383
chr1 184940863 184940874 USF2 JASPAR yes 33786384
chr1 184940863 184940874 USF1 JASPAR yes 118415769
chr1 184940863 184940874 USF2 JASPAR yes 118415770
chr1 184940887 184940903 POU4F3 JASPAR yes 33786385
chr1 184940887 184940903 POU4F3 JASPAR yes 118415771
chr1 184940889 184940903 POU4F1 JASPAR yes 33786386
chr1 184940889 184940903 POU4F1 JASPAR yes 118415772
chr1 184940889 184940904 HNF1A JASPAR yes 33786387
chr1 184940889 184940904 HNF1A JASPAR yes 118415773
chr1 184940890 184940902 FOXC2 JASPAR yes 33786388
chr1 184940890 184940902 FOXC2 JASPAR yes 118415774
chr1 184940890 184940903 HNF1B JASPAR yes 33786389
chr1 184940890 184940903 HNF1B JASPAR yes 118415775
chr1 184940890 184940904 POU4F1 JASPAR yes 33786390
chr1 184940890 184940904 POU4F1 JASPAR yes 118415776
chr1 184940890 184940906 POU4F3 JASPAR yes 33786391
chr1 184940890 184940906 POU4F3 JASPAR yes 118415777
chr1 184940892 184940896 YY1 TRANSFAC yes 33786392
chr1 184940892 184940896 YY1 TRANSFAC yes 118415778
chr1 184940892 184940907 MEF2A JASPAR yes 33786393
chr1 184940892 184940907 MEF2A JASPAR yes 118415779
chr1 184940893 184940908 MEF2A JASPAR yes 33786394
chr1 184940893 184940908 MEF2A JASPAR yes 118415780
chr1 184940894 184940906 MEF2A JASPAR yes 33786395
chr1 184940894 184940906 MEF2B JASPAR yes 33786396
chr1 184940894 184940906 MEF2D JASPAR yes 33786397
chr1 184940894 184940906 MEF2A JASPAR yes 118415781
chr1 184940894 184940906 MEF2B JASPAR yes 118415782
chr1 184940894 184940906 MEF2D JASPAR yes 118415783
chr1 184940895 184940905 MEF2A JASPAR yes 33786398
chr1 184940895 184940905 MEF2A JASPAR yes 118415784
chr1 184940910 184940918 GATA5 JASPAR yes 33786399
chr1 184940910 184940918 GATA5 JASPAR yes 118415785
SNP sites on vista4240[chr1:184940554-184940925]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 184940652 rs148964708 A C,G
REST
790407
chr1 184940679 rs147057117 G A no 790408
chr1 184940708 rs201312414 A G no 790409
chr1 184940730 rs138344062 A C
RXRB RXRG
790410
chr1 184940765 rs114687862 A G no 790411
chr1 184940783 rs200280269 AGAGT A no 790412
chr1 184940826 rs72739664 G A no 790413
Genes possibly regulated by vista4240[chr1:184940554-184940925]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 184759858 184943682 - FAM129A ENSG00000135842.12 184943682 0.91 1.0 1649 97243
chr1 185014496 185071740 + RNF2 ENSG00000121481.6 185014496 0.75 0.99 1650 26429
Expression level of Genes
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miRNAs possibly regulated by vista4240[chr1:184940554-184940925]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results