EnhancerDB
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  3. vista42402[chr3:128958880-128959235]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42402[chr3:128958880-128959235]
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Tissue distribution of vista42402
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Transcription factor that possibly regulate vista42402[chr3:128958880-128959235]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 128958886 128958901 FOXA1 JASPAR yes 5648796
chr3 128958886 128958901 FOXA1 JASPAR yes 71050870
chr3 128958887 128958902 FOXP1 JASPAR yes 5648797
chr3 128958887 128958902 FOXP1 JASPAR yes 71050871
chr3 128958888 128958899 FOXP2 JASPAR yes 5648798
chr3 128958888 128958899 FOXP2 JASPAR yes 71050872
chr3 128958888 128958900 FOXC2 JASPAR yes 5648799
chr3 128958888 128958900 FOXC2 JASPAR yes 71050873
chr3 128958888 128958902 FOXF2 JASPAR yes 5648800
chr3 128958888 128958902 FOXF2 JASPAR yes 71050874
chr3 128958889 128958897 FOXD1 JASPAR yes 5648801
chr3 128958889 128958897 FOXG1 JASPAR yes 5648802
chr3 128958889 128958897 FOXO3 JASPAR yes 5648803
chr3 128958889 128958897 FOXD1 JASPAR yes 71050875
chr3 128958889 128958897 FOXG1 JASPAR yes 71050876
chr3 128958889 128958897 FOXO3 JASPAR yes 71050877
chr3 128958890 128958897 FOXD2 JASPAR yes 5648804
chr3 128958890 128958897 FOXI1 JASPAR yes 5648805
chr3 128958890 128958897 FOXL1 JASPAR yes 5648806
chr3 128958890 128958897 FOXO4 JASPAR yes 5648807
chr3 128958890 128958897 FOXO6 JASPAR yes 5648808
chr3 128958890 128958897 FOXP3 JASPAR yes 5648809
chr3 128958890 128958897 FOXD2 JASPAR yes 71050878
chr3 128958890 128958897 FOXI1 JASPAR yes 71050879
chr3 128958890 128958897 FOXL1 JASPAR yes 71050880
chr3 128958890 128958897 FOXO4 JASPAR yes 71050881
chr3 128958890 128958897 FOXO6 JASPAR yes 71050882
chr3 128958890 128958897 FOXP3 JASPAR yes 71050883
chr3 128958890 128958901 FOXA1 JASPAR yes 5648810
chr3 128958890 128958901 FOXA1 JASPAR yes 71050884
chr3 128958901 128958912 EBF1 JASPAR yes 5648811
chr3 128958901 128958912 EBF1 JASPAR yes 71050885
chr3 128958903 128958914 CEBPA JASPAR yes 5648812
chr3 128958903 128958914 CEBPA JASPAR yes 71050886
chr3 128958907 128958911 LFA1 TRANSFAC yes 5648813
chr3 128958907 128958911 LFA1 TRANSFAC yes 71050887
chr3 128958925 128958938 ELF1 JASPAR yes 5648814
chr3 128958925 128958938 ELF1 JASPAR yes 71050888
chr3 128958933 128958953 RREB1 JASPAR yes 5648815
chr3 128958933 128958953 RREB1 JASPAR yes 71050889
chr3 128958987 128958991 H4TF2 TRANSFAC yes 5648816
chr3 128958987 128958991 H4TF2 TRANSFAC yes 71050890
chr3 128958989 128958995 MZF1 JASPAR yes 5648817
chr3 128958989 128958995 MZF1 JASPAR yes 71050891
chr3 128959000 128959013 POU2F2 JASPAR yes 5648818
chr3 128959000 128959013 POU2F2 JASPAR yes 71050892
chr3 128959009 128959020 FOXA1 JASPAR yes 5648819
chr3 128959009 128959020 FOXA1 JASPAR yes 71050893
chr3 128959011 128959022 FOXP2 JASPAR yes 5648820
chr3 128959011 128959022 FOXP2 JASPAR yes 71050894
chr3 128959025 128959029 H1TF2 TRANSFAC yes 5648821
chr3 128959025 128959029 NFE TRANSFAC yes 5648822
chr3 128959025 128959029 SRF TRANSFAC yes 5648823
chr3 128959025 128959029 H1TF2 TRANSFAC yes 71050895
chr3 128959025 128959029 NFE TRANSFAC yes 71050896
chr3 128959025 128959029 SRF TRANSFAC yes 71050897
chr3 128959034 128959045 ELK4 JASPAR yes 5648824
chr3 128959034 128959045 FLI1 JASPAR yes 5648825
chr3 128959034 128959045 ELK4 JASPAR yes 71050898
chr3 128959034 128959045 FLI1 JASPAR yes 71050899
chr3 128959035 128959045 ETV6 JASPAR yes 5648826
chr3 128959035 128959045 GABPA JASPAR yes 5648827
chr3 128959035 128959045 ETV6 JASPAR yes 71050900
chr3 128959035 128959045 GABPA JASPAR yes 71050901
chr3 128959035 128959046 ELF5 JASPAR yes 5648828
chr3 128959035 128959046 ELF5 JASPAR yes 71050902
chr3 128959035 128959047 EHF JASPAR yes 5648829
chr3 128959035 128959047 ELF1 JASPAR yes 5648830
chr3 128959035 128959047 ELF4 JASPAR yes 5648831
chr3 128959035 128959047 EHF JASPAR yes 71050903
chr3 128959035 128959047 ELF1 JASPAR yes 71050904
chr3 128959035 128959047 ELF4 JASPAR yes 71050905
chr3 128959035 128959048 ELF1 JASPAR yes 5648832
chr3 128959035 128959048 ELF1 JASPAR yes 71050906
chr3 128959036 128959043 SPI1 JASPAR yes 5648833
chr3 128959036 128959043 SPI1 JASPAR yes 71050907
chr3 128959036 128959044 EHF JASPAR yes 5648834
chr3 128959036 128959044 FEV JASPAR yes 5648835
chr3 128959036 128959044 EHF JASPAR yes 71050908
chr3 128959036 128959044 FEV JASPAR yes 71050909
chr3 128959036 128959050 EBF1 JASPAR yes 5648836
chr3 128959036 128959050 EBF1 JASPAR yes 71050910
chr3 128959042 128959047 TFAP2A TRANSFAC yes 5648837
chr3 128959042 128959047 TFAP2A TRANSFAC yes 71050911
chr3 128959042 128959048 MZF1 JASPAR yes 5648838
chr3 128959042 128959048 MZF1 JASPAR yes 71050912
chr3 128959072 128959083 CEBPB JASPAR yes 5648839
chr3 128959072 128959083 CEBPB JASPAR yes 71050913
chr3 128959073 128959084 CEBPA JASPAR yes 5648840
chr3 128959073 128959084 CEBPA JASPAR yes 71050914
chr3 128959076 128959090 FOXF2 JASPAR yes 5648841
chr3 128959076 128959090 FOXF2 JASPAR yes 71050915
chr3 128959079 128959091 FOXI1 JASPAR yes 5648842
chr3 128959079 128959091 FOXI1 JASPAR yes 71050916
chr3 128959081 128959089 FOXG1 JASPAR yes 5648843
chr3 128959081 128959089 FOXG1 JASPAR yes 71050917
chr3 128959085 128959104 REST JASPAR yes 5648844
chr3 128959085 128959104 REST JASPAR yes 71050918
chr3 128959098 128959111 ATF4 JASPAR yes 5648845
chr3 128959098 128959111 ATF4 JASPAR yes 71050919
chr3 128959103 128959113 TEAD1 JASPAR yes 5648846
chr3 128959103 128959113 TEAD1 JASPAR yes 71050920
chr3 128959117 128959121 LFA1 TRANSFAC yes 5648847
chr3 128959117 128959121 LFA1 TRANSFAC yes 71050921
chr3 128959129 128959145 GLIS1 JASPAR yes 5648848
chr3 128959129 128959145 GLIS1 JASPAR yes 71050922
chr3 128959136 128959140 LFA1 TRANSFAC yes 5648849
chr3 128959136 128959140 LFA1 TRANSFAC yes 71050923
chr3 128959143 128959154 CEBPB JASPAR yes 5648850
chr3 128959143 128959154 CEBPB JASPAR yes 71050924
chr3 128959144 128959154 CEBPB JASPAR yes 5648851
chr3 128959144 128959154 CEBPD JASPAR yes 5648852
chr3 128959144 128959154 CEBPE JASPAR yes 5648853
chr3 128959144 128959154 CEBPG JASPAR yes 5648854
chr3 128959144 128959154 CEBPB JASPAR yes 71050925
chr3 128959144 128959154 CEBPD JASPAR yes 71050926
chr3 128959144 128959154 CEBPE JASPAR yes 71050927
chr3 128959144 128959154 CEBPG JASPAR yes 71050928
chr3 128959144 128959155 CEBPA JASPAR yes 5648855
chr3 128959144 128959155 CEBPA JASPAR yes 71050929
chr3 128959216 128959233 ZNF410 JASPAR yes 5648856
chr3 128959216 128959233 ZNF410 JASPAR yes 71050930
SNP sites on vista42402[chr3:128958880-128959235]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 128958958 rs188020037 G A no 7024721
chr3 128959064 rs79871865 C T no 7024722
chr3 128959077 rs576770591 G C
CEBPA CEBPB FOXF2
7024723
chr3 128959096 rs73862828 G A
REST
7024724
chr3 128959117 rs62266865 G A,C
LFA1
7024725
chr3 128959126 rs571575650 C T no 7024726
Genes possibly regulated by vista42402[chr3:128958880-128959235]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 128806418 128879879 - ISY1-RAB43 ENSG00000261796.1 128879879 0.91 0.81 4063 20999
chr3 128846258 128880136 - ISY1 ENSG00000240682.5 128880136 0.67 0.98 4064 21256
chr3 128888327 128902765 - CNBP ENSG00000169714.12 128902765 0.59 1.0 4065 43885
chr3 128968449 128996614 + COPG1 ENSG00000181789.10 128968449 0.55 1.0 4066 90786
chr3 128997671 129025029 + HMCES ENSG00000183624.9 128997671 0.57 1.0 4067 61564
chr3 129033615 129035120 - H1FX ENSG00000184897.4 129035120 0.76 1.0 4068 24115
Expression level of Genes
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miRNAs possibly regulated by vista42402[chr3:128958880-128959235]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results