EnhancerDB
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  3. vista42407[chr3:129204579-129204997]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42407[chr3:129204579-129204997]
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Tissue distribution of vista42407
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Transcription factor that possibly regulate vista42407[chr3:129204579-129204997]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 129204580 129204747 MAFK UCSC Txn Factor no Conserved 108530360
chr3 129204646 129204939 CEBPB UCSC Txn Factor no Conserved 108530361
chr3 129204718 129205015 ESR1 UCSC Txn Factor no Conserved 108530362
chr3 129204735 129205028 E2F1 UCSC Txn Factor no Conserved 108530363
chr3 129204568 129204581 TFAP2A JASPAR yes 5662837
chr3 129204568 129204581 TFAP2A JASPAR yes 71051102
chr3 129204576 129204580 LFA1 TRANSFAC yes 5662838
chr3 129204576 129204580 LFA1 TRANSFAC yes 71051103
chr3 129204580 129204591 TFAP2A JASPAR yes 5662839
chr3 129204580 129204591 TFAP2B JASPAR yes 5662840
chr3 129204580 129204591 TFAP2C JASPAR yes 5662841
chr3 129204580 129204591 TFAP2A JASPAR yes 71051104
chr3 129204580 129204591 TFAP2B JASPAR yes 71051105
chr3 129204580 129204591 TFAP2C JASPAR yes 71051106
chr3 129204581 129204590 TFAP2A JASPAR yes 5662842
chr3 129204581 129204590 TFAP2A JASPAR yes 71051107
chr3 129204585 129204595 NFKB1 JASPAR yes 5662843
chr3 129204585 129204595 NFKB1 JASPAR yes 71051108
chr3 129204590 129204597 SPIB JASPAR yes 5662844
chr3 129204590 129204597 SPIB JASPAR yes 71051109
chr3 129204624 129204635 NRL JASPAR yes 5662845
chr3 129204624 129204635 NRL JASPAR yes 71051110
chr3 129204639 129204650 ESRRB JASPAR yes 5662846
chr3 129204639 129204650 ESRRB JASPAR yes 71051111
chr3 129204644 129204650 YY1 JASPAR yes 5662847
chr3 129204644 129204650 YY1 JASPAR yes 71051112
chr3 129204645 129204663 MAFF JASPAR yes 5662848
chr3 129204645 129204663 MAFF JASPAR yes 71051113
chr3 129204647 129204658 NRL JASPAR yes 5662849
chr3 129204647 129204658 NRL JASPAR yes 71051114
chr3 129204647 129204662 MAFK JASPAR yes 5662850
chr3 129204647 129204662 MAFK JASPAR yes 71051115
chr3 129204647 129204668 MAFG JASPAR yes 5662851
chr3 129204647 129204668 MAFG JASPAR yes 71051116
chr3 129204649 129204661 CREB1 JASPAR yes 5662852
chr3 129204649 129204661 CREB1 JASPAR yes 71051117
chr3 129204664 129204668 ESR1 TRANSFAC yes 5662853
chr3 129204664 129204668 ESR1 TRANSFAC yes 71051118
chr3 129204673 129204679 NFIC JASPAR yes 5662854
chr3 129204673 129204679 NFIC JASPAR yes 71051119
chr3 129204687 129204693 HiNF-A TRANSFAC yes 5662855
chr3 129204687 129204693 HiNF-A TRANSFAC yes 71051120
chr3 129204702 129204708 SOX10 JASPAR yes 5662856
chr3 129204702 129204708 SOX10 JASPAR yes 71051121
chr3 129204717 129204721 NFE TRANSFAC yes 5662857
chr3 129204717 129204721 NFE TRANSFAC yes 71051122
chr3 129204724 129204739 TFAP2A JASPAR yes 5662858
chr3 129204724 129204739 TFAP2A JASPAR yes 71051123
chr3 129204727 129204738 TFAP2A JASPAR yes 5662859
chr3 129204727 129204738 TFAP2B JASPAR yes 5662860
chr3 129204727 129204738 TFAP2C JASPAR yes 5662861
chr3 129204727 129204738 TFAP2A JASPAR yes 71051124
chr3 129204727 129204738 TFAP2B JASPAR yes 71051125
chr3 129204727 129204738 TFAP2C JASPAR yes 71051126
chr3 129204727 129204739 TFAP2A JASPAR yes 5662862
chr3 129204727 129204739 TFAP2B JASPAR yes 5662863
chr3 129204727 129204739 TFAP2C JASPAR yes 5662864
chr3 129204727 129204739 TFAP2A JASPAR yes 71051127
chr3 129204727 129204739 TFAP2B JASPAR yes 71051128
chr3 129204727 129204739 TFAP2C JASPAR yes 71051129
chr3 129204732 129204740 YY1 TRANSFAC yes 5662865
chr3 129204732 129204740 YY1 TRANSFAC yes 71051130
chr3 129204732 129204744 YY1 JASPAR yes 5662866
chr3 129204732 129204744 YY1 JASPAR yes 71051131
chr3 129204735 129204741 YY1 JASPAR yes 5662867
chr3 129204735 129204741 YY1 JASPAR yes 71051132
chr3 129204736 129204751 RUNX2 JASPAR yes 5662868
chr3 129204736 129204751 RUNX2 JASPAR yes 71051133
chr3 129204739 129204750 RUNX1 JASPAR yes 5662869
chr3 129204739 129204750 RUNX1 JASPAR yes 71051134
chr3 129204740 129204750 RUNX3 JASPAR yes 5662870
chr3 129204740 129204750 RUNX3 JASPAR yes 71051135
chr3 129204741 129204750 RUNX2 JASPAR yes 5662871
chr3 129204741 129204750 RUNX2 JASPAR yes 71051136
chr3 129204759 129204766 CEBPA TRANSFAC yes 5662872
chr3 129204759 129204766 CEBPA TRANSFAC yes 71051137
chr3 129204760 129204771 E2F6 JASPAR yes 5662873
chr3 129204760 129204771 E2F6 JASPAR yes 71051138
chr3 129204810 129204821 FOXB1 JASPAR yes 5662874
chr3 129204810 129204821 FOXB1 JASPAR yes 71051139
chr3 129204810 129204823 POU3F3 JASPAR yes 5662875
chr3 129204810 129204823 POU3F3 JASPAR yes 71051140
chr3 129204812 129204821 POU3F4 JASPAR yes 5662876
chr3 129204812 129204821 POU5F1B JASPAR yes 5662877
chr3 129204812 129204821 POU3F4 JASPAR yes 71051141
chr3 129204812 129204821 POU5F1B JASPAR yes 71051142
chr3 129204822 129204833 CEBPA JASPAR yes 5662878
chr3 129204822 129204833 CEBPA JASPAR yes 71051143
chr3 129204831 129204843 GRHL1 JASPAR yes 5662879
chr3 129204831 129204843 GRHL1 JASPAR yes 71051144
chr3 129204832 129204842 TFCP2 JASPAR yes 5662880
chr3 129204832 129204842 TFCP2 JASPAR yes 71051145
chr3 129204844 129204863 PAX5 JASPAR yes 5662881
chr3 129204844 129204863 PAX5 JASPAR yes 71051146
chr3 129204848 129204858 NFIA JASPAR yes 5662882
chr3 129204848 129204858 NFIA JASPAR yes 71051147
chr3 129204850 129204856 NFIC JASPAR yes 5662883
chr3 129204850 129204856 NFIC JASPAR yes 71051148
chr3 129204855 129204875 PPARG JASPAR yes 5662884
chr3 129204855 129204875 PPARG JASPAR yes 71051149
chr3 129204857 129204875 ESR2 JASPAR yes 5662885
chr3 129204857 129204875 ESR2 JASPAR yes 71051150
chr3 129204858 129204878 ESR1 JASPAR yes 5662886
chr3 129204858 129204878 ESR1 JASPAR yes 71051151
chr3 129204887 129204892 SP1 TRANSFAC yes 5662887
chr3 129204887 129204892 SP1 TRANSFAC yes 71051152
chr3 129204893 129204907 ATF7 JASPAR yes 5662888
chr3 129204893 129204907 BATF3 JASPAR yes 5662889
chr3 129204893 129204907 ATF7 JASPAR yes 71051153
chr3 129204893 129204907 BATF3 JASPAR yes 71051154
chr3 129204894 129204906 JDP2 JASPAR yes 5662890
chr3 129204894 129204906 JDP2 JASPAR yes 71051155
chr3 129204923 129204931 GATA3 JASPAR yes 5662891
chr3 129204923 129204931 GATA3 JASPAR yes 71051156
chr3 129204945 129204949 YY1 TRANSFAC yes 5662892
chr3 129204945 129204949 YY1 TRANSFAC yes 71051157
chr3 129204959 129204974 MEF2A JASPAR yes 5662893
chr3 129204959 129204974 MEF2A JASPAR yes 71051158
chr3 129204960 129204975 MEF2C JASPAR yes 5662894
chr3 129204960 129204975 MEF2C JASPAR yes 71051159
chr3 129204961 129204973 MEF2A JASPAR yes 5662895
chr3 129204961 129204973 MEF2B JASPAR yes 5662896
chr3 129204961 129204973 MEF2D JASPAR yes 5662897
chr3 129204961 129204973 MEF2A JASPAR yes 71051160
chr3 129204961 129204973 MEF2B JASPAR yes 71051161
chr3 129204961 129204973 MEF2D JASPAR yes 71051162
chr3 129204962 129204972 MEF2A JASPAR yes 5662898
chr3 129204962 129204972 MEF2A JASPAR yes 71051163
chr3 129204963 129204967 YY1 TRANSFAC yes 5662899
chr3 129204963 129204967 YY1 TRANSFAC yes 71051164
SNP sites on vista42407[chr3:129204579-129204997]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 129204757 rs570252241 A C
CEBPB E2F1 ESR1
7026428
chr3 129204766 rs537211314 G C
CEBPA CEBPB E2F1 E2F6 ESR1
7026429
chr3 129204944 rs142790941 A G
E2F1 ESR1
7026430
chr3 129204954 rs114328774 C T
E2F1 ESR1
7026431
Genes possibly regulated by vista42407[chr3:129204579-129204997]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 129120164 129147494 - EFCAB12 ENSG00000172771.7 129147494 0.85 1.0 4069 42915
chr3 129149787 129158878 - MBD4 ENSG00000129071.5 129158878 0.58 0.99 4070 54299
chr3 129158968 129239198 + IFT122 ENSG00000163913.7 129158968 0.75 1.0 4071 54389
chr3 129247483 129254012 + RHO ENSG00000163914.4 129247483 0.85 1.0 4072 57514
chr3 129262057 129270310 + H1FOO ENSG00000178804.3 129262057 0.97 1.0 4073 42940
Expression level of Genes
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miRNAs possibly regulated by vista42407[chr3:129204579-129204997]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results