EnhancerDB
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  3. vista42408[chr3:129244298-129244494]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42408[chr3:129244298-129244494]
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Tissue distribution of vista42408
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Transcription factor that possibly regulate vista42408[chr3:129244298-129244494]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 129244307 129244326 REST JASPAR yes 71051165
chr3 129244307 129244328 ZNF263 JASPAR yes 71051166
chr3 129244308 129244322 PLAG1 JASPAR yes 71051167
chr3 129244321 129244326 ETS2 TRANSFAC yes 71051168
chr3 129244323 129244334 FLI1 JASPAR yes 71051169
chr3 129244324 129244329 ETS2 TRANSFAC yes 71051170
chr3 129244334 129244350 RFX3 JASPAR yes 71051171
chr3 129244334 129244350 RFX4 JASPAR yes 71051172
chr3 129244334 129244350 RFX5 JASPAR yes 71051173
chr3 129244342 129244353 JUNB JASPAR yes 71051174
chr3 129244343 129244354 FOSL1 JASPAR yes 71051175
chr3 129244344 129244351 JUN TRANSFAC yes 71051176
chr3 129244393 129244399 NFE2 TRANSFAC yes 71051177
chr3 129244394 129244406 TFAP2A JASPAR yes 71051178
chr3 129244394 129244408 GLIS2 JASPAR yes 71051179
chr3 129244400 129244420 ESR1 JASPAR yes 71051180
chr3 129244404 129244422 ESR1 JASPAR yes 71051181
chr3 129244405 129244420 ESR2 JASPAR yes 71051182
chr3 129244408 129244422 JUN JASPAR yes 71051183
chr3 129244411 129244422 FOSL2 JASPAR yes 71051184
chr3 129244411 129244422 JUNB JASPAR yes 71051185
chr3 129244412 129244423 FOS JASPAR yes 71051186
chr3 129244412 129244423 FOSL1 JASPAR yes 71051187
chr3 129244412 129244423 JUND JASPAR yes 71051188
chr3 129244413 129244420 JUN TRANSFAC yes 71051189
chr3 129244413 129244427 JUN JASPAR yes 71051190
chr3 129244414 129244425 BATF JASPAR yes 71051191
chr3 129244426 129244436 REL JASPAR yes 71051192
chr3 129244426 129244437 NFKB1 JASPAR yes 71051193
chr3 129244435 129244439 YY1 TRANSFAC yes 71051194
chr3 129244458 129244469 BATF JASPAR yes 71051195
chr3 129244463 129244467 YY1 TRANSFAC yes 71051196
chr3 129244464 129244484 TBX19 JASPAR yes 71051197
chr3 129244473 129244483 SREBF2 JASPAR yes 71051198
chr3 129244473 129244483 TBX21 JASPAR yes 71051199
chr3 129244473 129244484 TBX20 JASPAR yes 71051200
chr3 129244473 129244484 TBX2 JASPAR yes 71051201
chr3 129244473 129244486 EOMES JASPAR yes 71051202
chr3 129244474 129244482 MGA JASPAR yes 71051203
chr3 129244474 129244484 TBR1 JASPAR yes 71051204
SNP sites on vista42408[chr3:129244298-129244494]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 129244318 rs9823319 A G
PLAG1 REST ZNF263
7026720
chr3 129244383 rs78340842 C A,T no 7026721
chr3 129244494 rs74652155 G A no 7026722
Genes possibly regulated by vista42408[chr3:129244298-129244494]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 129120164 129147494 - EFCAB12 ENSG00000172771.7 129147494 0.85 1.0 4069 3196
chr3 129149787 129158878 - MBD4 ENSG00000129071.5 129158878 0.58 0.99 4070 14580
chr3 129158968 129239198 + IFT122 ENSG00000163913.7 129158968 0.75 1.0 4071 14670
chr3 129247483 129254012 + RHO ENSG00000163914.4 129247483 0.85 1.0 4072 97011
chr3 129262057 129270310 + H1FOO ENSG00000178804.3 129262057 0.97 1.0 4073 82437
chr3 129274018 129325661 - PLXND1 ENSG00000004399.8 129325661 0.81 1.0 4074 18833
Expression level of Genes
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miRNAs possibly regulated by vista42408[chr3:129244298-129244494]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results