EnhancerDB
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  3. vista42414[chr3:129315034-129315445]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42414[chr3:129315034-129315445]
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Tissue distribution of vista42414
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Transcription factor that possibly regulate vista42414[chr3:129315034-129315445]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 129315076 129315087 ELK4 JASPAR yes 5668554
chr3 129315076 129315087 FLI1 JASPAR yes 5668555
chr3 129315076 129315087 ELK4 JASPAR yes 71051449
chr3 129315076 129315087 FLI1 JASPAR yes 71051450
chr3 129315077 129315090 ELF1 JASPAR yes 5668556
chr3 129315077 129315090 ELF1 JASPAR yes 71051451
chr3 129315118 129315123 SP1 TRANSFAC yes 5668557
chr3 129315118 129315123 SP1 TRANSFAC yes 71051452
chr3 129315127 129315138 ESRRA JASPAR yes 5668558
chr3 129315127 129315138 ESRRA JASPAR yes 71051453
chr3 129315170 129315181 E2F1 JASPAR yes 5668559
chr3 129315170 129315181 E2F1 JASPAR yes 71051454
chr3 129315174 129315189 RFX5 JASPAR yes 5668560
chr3 129315174 129315189 RFX5 JASPAR yes 71051455
chr3 129315180 129315192 ZBTB7A JASPAR yes 5668561
chr3 129315180 129315192 ZBTB7A JASPAR yes 71051456
chr3 129315181 129315193 ZBTB7C JASPAR yes 5668562
chr3 129315181 129315193 ZBTB7C JASPAR yes 71051457
chr3 129315209 129315221 YY1 JASPAR yes 5668563
chr3 129315209 129315221 YY1 JASPAR yes 71051458
chr3 129315213 129315222 SOX9 JASPAR yes 5668564
chr3 129315213 129315222 SOX9 JASPAR yes 71051459
chr3 129315215 129315224 SRY JASPAR yes 5668565
chr3 129315215 129315224 SRY JASPAR yes 71051460
chr3 129315215 129315227 FOXC2 JASPAR yes 5668566
chr3 129315215 129315227 FOXC2 JASPAR yes 71051461
chr3 129315253 129315263 MZF1 JASPAR yes 5668567
chr3 129315253 129315263 MZF1 JASPAR yes 71051462
chr3 129315298 129315302 YY1 TRANSFAC yes 5668568
chr3 129315298 129315302 YY1 TRANSFAC yes 71051463
chr3 129315309 129315315 SP1 TRANSFAC yes 5668569
chr3 129315309 129315315 SP1 TRANSFAC yes 71051464
chr3 129315309 129315319 SP1 JASPAR yes 5668570
chr3 129315309 129315319 SP1 JASPAR yes 71051465
chr3 129315313 129315324 EBF1 JASPAR yes 5668571
chr3 129315313 129315324 EBF1 JASPAR yes 71051466
chr3 129315313 129315327 PLAG1 JASPAR yes 5668572
chr3 129315313 129315327 PLAG1 JASPAR yes 71051467
chr3 129315321 129315325 H4TF2 TRANSFAC yes 5668573
chr3 129315321 129315325 H4TF2 TRANSFAC yes 71051468
chr3 129315327 129315348 ZNF263 JASPAR yes 5668574
chr3 129315327 129315348 ZNF263 JASPAR yes 71051469
chr3 129315333 129315350 ZNF410 JASPAR yes 5668575
chr3 129315333 129315350 ZNF410 JASPAR yes 71051470
chr3 129315340 129315350 SP1 JASPAR yes 5668576
chr3 129315340 129315350 SP1 JASPAR yes 71051471
chr3 129315347 129315351 LFA1 TRANSFAC yes 5668577
chr3 129315347 129315351 LFA1 TRANSFAC yes 71051472
chr3 129315383 129315394 E2F6 JASPAR yes 5668578
chr3 129315383 129315394 E2F6 JASPAR yes 71051473
chr3 129315386 129315396 SP1 JASPAR yes 5668579
chr3 129315386 129315396 SP1 JASPAR yes 71051474
chr3 129315387 129315397 SP1 JASPAR yes 5668580
chr3 129315387 129315397 SP1 JASPAR yes 71051475
chr3 129315393 129315408 ZIC3 JASPAR yes 5668581
chr3 129315393 129315408 ZIC3 JASPAR yes 71051476
chr3 129315394 129315408 ZIC1 JASPAR yes 5668582
chr3 129315394 129315408 ZIC1 JASPAR yes 71051477
chr3 129315405 129315409 LFA1 TRANSFAC yes 5668583
chr3 129315405 129315409 LFA1 TRANSFAC yes 71051478
chr3 129315429 129315448 REST JASPAR yes 5668584
chr3 129315429 129315448 REST JASPAR yes 71051479
chr3 129315432 129315448 SOX4 JASPAR yes 5668585
chr3 129315432 129315448 SOX4 JASPAR yes 71051480
chr3 129315436 129315454 NR3C1 JASPAR yes 5668586
chr3 129315436 129315454 NR3C1 JASPAR yes 71051481
chr3 129315444 129315455 E2F6 JASPAR yes 5668587
chr3 129315444 129315455 E2F6 JASPAR yes 71051482
chr3 129315444 129315465 ZNF263 JASPAR yes 5668588
chr3 129315444 129315465 ZNF263 JASPAR yes 71051483
SNP sites on vista42414[chr3:129315034-129315445]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 129315043 rs115850639 C T no 7027098
chr3 129315079 rs573567668 G A
ELF1 ELK4 FLI1
7027099
chr3 129315100 rs544150518 C T no 7027100
chr3 129315159 rs372393697 G A no 7027101
chr3 129315177 rs374408132 G A,T
E2F1 RFX5
7027102
chr3 129315183 rs368387330 G T
RFX5 ZBTB7A ZBTB7C
7027103
chr3 129315251 rs549214669 C G no 7027104
chr3 129315265 rs561393956 T A,C no 7027105
chr3 129315296 rs114234174 C T no 7027106
chr3 129315413 rs555178312 G A no 7027107
Genes possibly regulated by vista42414[chr3:129315034-129315445]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 129247483 129254012 + RHO ENSG00000163914.4 129247483 0.85 1.0 4072 32449
chr3 129262057 129270310 + H1FOO ENSG00000178804.3 129262057 0.97 1.0 4073 47023
chr3 129274018 129325661 - PLXND1 ENSG00000004399.8 129325661 0.81 1.0 4074 89784
Expression level of Genes
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miRNAs possibly regulated by vista42414[chr3:129315034-129315445]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results