EnhancerDB
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  3. vista42415[chr3:129315678-129315871]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42415[chr3:129315678-129315871]
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Tissue distribution of vista42415
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Transcription factor that possibly regulate vista42415[chr3:129315678-129315871]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 129315540 129315874 CEBPB UCSC Txn Factor no Conserved 108530367
chr3 129315717 129315737 TP53 JASPAR yes 5668618
chr3 129315717 129315737 TP53 JASPAR yes 71051484
chr3 129315747 129315752 TFAP2A TRANSFAC yes 5668619
chr3 129315747 129315752 TFAP2A TRANSFAC yes 71051485
chr3 129315747 129315753 MZF1 JASPAR yes 5668620
chr3 129315747 129315753 MZF1 JASPAR yes 71051486
chr3 129315768 129315773 SP1 TRANSFAC yes 5668621
chr3 129315768 129315773 SP1 TRANSFAC yes 71051487
chr3 129315784 129315793 THAP1 JASPAR yes 5668622
chr3 129315784 129315793 THAP1 JASPAR yes 71051488
chr3 129315795 129315810 HNF4G JASPAR yes 5668623
chr3 129315795 129315810 HNF4G JASPAR yes 71051489
chr3 129315796 129315811 HNF4A JASPAR yes 5668624
chr3 129315796 129315811 HNF4A JASPAR yes 71051490
chr3 129315807 129315815 SP1 TRANSFAC yes 5668625
chr3 129315807 129315815 SP1 TRANSFAC yes 71051491
chr3 129315817 129315827 MZF1 JASPAR yes 5668626
chr3 129315817 129315827 MZF1 JASPAR yes 71051492
chr3 129315820 129315825 TFAP2A TRANSFAC yes 5668627
chr3 129315820 129315825 TFAP2A TRANSFAC yes 71051493
chr3 129315820 129315826 MZF1 JASPAR yes 5668628
chr3 129315820 129315826 MZF1 JASPAR yes 71051494
chr3 129315820 129315830 SP1 JASPAR yes 5668629
chr3 129315820 129315830 SP1 JASPAR yes 71051495
chr3 129315822 129315828 MAZ TRANSFAC yes 5668630
chr3 129315822 129315828 MAZ TRANSFAC yes 71051496
chr3 129315827 129315831 LFA1 TRANSFAC yes 5668631
chr3 129315827 129315831 LFA1 TRANSFAC yes 71051497
chr3 129315833 129315849 RFX5 JASPAR yes 5668632
chr3 129315833 129315849 RFX5 JASPAR yes 71051498
chr3 129315834 129315853 RFX2 JASPAR yes 5668633
chr3 129315834 129315853 RFX2 JASPAR yes 71051499
chr3 129315836 129315851 RFX5 JASPAR yes 5668634
chr3 129315836 129315851 RFX5 JASPAR yes 71051500
chr3 129315844 129315847 MYB TRANSFAC yes 5668635
chr3 129315844 129315847 MYB TRANSFAC yes 71051501
chr3 129315869 129315882 ZBTB18 JASPAR yes 5668636
chr3 129315869 129315882 ZBTB18 JASPAR yes 71051502
chr3 129315870 129315882 NHLH1 JASPAR yes 5668637
chr3 129315870 129315882 NHLH1 JASPAR yes 71051503
chr3 129315871 129315881 MSC JASPAR yes 5668638
chr3 129315871 129315881 NHLH1 JASPAR yes 5668639
chr3 129315871 129315881 TFAP4 JASPAR yes 5668640
chr3 129315871 129315881 MSC JASPAR yes 71051504
chr3 129315871 129315881 NHLH1 JASPAR yes 71051505
chr3 129315871 129315881 TFAP4 JASPAR yes 71051506
SNP sites on vista42415[chr3:129315678-129315871]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 129315729 rs150963389 C T
CEBPB TP53
7027112
chr3 129315730 rs140759325 G A
CEBPB TP53
7027113
chr3 129315769 rs11711654 G A
CEBPB SP1
7027114
chr3 129315831 rs9837325 C A
CEBPB LFA1
7027115
Genes possibly regulated by vista42415[chr3:129315678-129315871]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 129247483 129254012 + RHO ENSG00000163914.4 129247483 0.85 1.0 4072 31805
chr3 129262057 129270310 + H1FOO ENSG00000178804.3 129262057 0.97 1.0 4073 46379
chr3 129274018 129325661 - PLXND1 ENSG00000004399.8 129325661 0.81 1.0 4074 90210
Expression level of Genes
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miRNAs possibly regulated by vista42415[chr3:129315678-129315871]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results