EnhancerDB
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  3. vista42417[chr3:129322103-129322311]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42417[chr3:129322103-129322311]
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Tissue distribution of vista42417
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Transcription factor that possibly regulate vista42417[chr3:129322103-129322311]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 129322088 129322103 TFAP2A JASPAR yes 5669403
chr3 129322088 129322103 TFAP2C JASPAR yes 5669404
chr3 129322088 129322103 TFAP2A JASPAR yes 71051538
chr3 129322088 129322103 TFAP2C JASPAR yes 71051539
chr3 129322094 129322104 SP1 JASPAR yes 5669405
chr3 129322094 129322104 SP1 JASPAR yes 71051540
chr3 129322103 129322114 EBF1 JASPAR yes 5669406
chr3 129322103 129322114 EBF1 JASPAR yes 71051541
chr3 129322115 129322125 SP1 JASPAR yes 5669407
chr3 129322115 129322125 SP1 JASPAR yes 71051542
chr3 129322117 129322121 NFE TRANSFAC yes 5669408
chr3 129322117 129322121 NFE TRANSFAC yes 71051543
chr3 129322148 129322160 NHLH1 JASPAR yes 5669409
chr3 129322148 129322160 NHLH1 JASPAR yes 71051544
chr3 129322149 129322159 NHLH1 JASPAR yes 5669410
chr3 129322149 129322159 NHLH1 JASPAR yes 71051545
chr3 129322153 129322167 JUN JASPAR yes 5669411
chr3 129322153 129322167 JUN JASPAR yes 71051546
chr3 129322156 129322167 FOSL2 JASPAR yes 5669412
chr3 129322156 129322167 JUNB JASPAR yes 5669413
chr3 129322156 129322167 FOSL2 JASPAR yes 71051547
chr3 129322156 129322167 JUNB JASPAR yes 71051548
chr3 129322157 129322168 FOS JASPAR yes 5669414
chr3 129322157 129322168 FOSL1 JASPAR yes 5669415
chr3 129322157 129322168 JUND JASPAR yes 5669416
chr3 129322157 129322168 NFE2 JASPAR yes 5669417
chr3 129322157 129322168 FOS JASPAR yes 71051549
chr3 129322157 129322168 FOSL1 JASPAR yes 71051550
chr3 129322157 129322168 JUND JASPAR yes 71051551
chr3 129322157 129322168 NFE2 JASPAR yes 71051552
chr3 129322158 129322167 JDP2 JASPAR yes 5669418
chr3 129322158 129322167 JDP2 JASPAR yes 71051553
chr3 129322158 129322169 FOSL2 JASPAR yes 5669419
chr3 129322158 129322169 JUNB JASPAR yes 5669420
chr3 129322158 129322169 FOSL2 JASPAR yes 71051554
chr3 129322158 129322169 JUNB JASPAR yes 71051555
chr3 129322158 129322172 JUN JASPAR yes 5669421
chr3 129322158 129322172 JUN JASPAR yes 71051556
chr3 129322164 129322180 ZNF143 JASPAR yes 5669422
chr3 129322164 129322180 ZNF143 JASPAR yes 71051557
chr3 129322177 129322189 HINFP JASPAR yes 5669423
chr3 129322177 129322189 HINFP JASPAR yes 71051558
chr3 129322213 129322223 SP1 JASPAR yes 5669424
chr3 129322213 129322223 SP1 JASPAR yes 71051559
chr3 129322213 129322233 ESR1 JASPAR yes 5669425
chr3 129322213 129322233 ESR1 JASPAR yes 71051560
chr3 129322215 129322221 MAZ TRANSFAC yes 5669426
chr3 129322215 129322221 MAZ TRANSFAC yes 71051561
chr3 129322215 129322226 E2F6 JASPAR yes 5669427
chr3 129322215 129322226 E2F6 JASPAR yes 71051562
chr3 129322220 129322234 NR2F1 JASPAR yes 5669428
chr3 129322220 129322234 NR2F1 JASPAR yes 71051563
chr3 129322238 129322243 ETS2 TRANSFAC yes 5669429
chr3 129322238 129322243 ETS2 TRANSFAC yes 71051564
chr3 129322296 129322302 PEA3 TRANSFAC yes 5669430
chr3 129322296 129322302 PEA3 TRANSFAC yes 71051565
chr3 129322297 129322305 EHF JASPAR yes 5669431
chr3 129322297 129322305 EHF JASPAR yes 71051566
chr3 129322307 129322318 FOXH1 JASPAR yes 5669432
chr3 129322307 129322318 FOXH1 JASPAR yes 71051567
SNP sites on vista42417[chr3:129322103-129322311]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 129322186 rs570877878 C T
HINFP
7027191
Genes possibly regulated by vista42417[chr3:129322103-129322311]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 129247483 129254012 + RHO ENSG00000163914.4 129247483 0.85 1.0 4072 25380
chr3 129262057 129270310 + H1FOO ENSG00000178804.3 129262057 0.97 1.0 4073 39954
chr3 129274018 129325661 - PLXND1 ENSG00000004399.8 129325661 0.81 1.0 4074 96650
Expression level of Genes
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miRNAs possibly regulated by vista42417[chr3:129322103-129322311]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results