EnhancerDB
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  3. vista42422[chr3:129346331-129346490]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42422[chr3:129346331-129346490]
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Tissue distribution of vista42422
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Transcription factor that possibly regulate vista42422[chr3:129346331-129346490]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 129345169 129347361 POLR2A UCSC Txn Factor no Conserved 108530369
chr3 129346332 129346336 LFA1 TRANSFAC yes 5672615
chr3 129346332 129346336 LFA1 TRANSFAC yes 71051702
chr3 129346379 129346384 TFAP2A TRANSFAC yes 5672616
chr3 129346379 129346384 TFAP2A TRANSFAC yes 71051703
chr3 129346379 129346385 MZF1 JASPAR yes 5672617
chr3 129346379 129346385 MZF1 JASPAR yes 71051704
chr3 129346379 129346400 ZNF263 JASPAR yes 5672618
chr3 129346379 129346400 ZNF263 JASPAR yes 71051705
chr3 129346382 129346403 ZNF263 JASPAR yes 5672619
chr3 129346382 129346403 ZNF263 JASPAR yes 71051706
chr3 129346388 129346409 ZNF263 JASPAR yes 5672620
chr3 129346388 129346409 ZNF263 JASPAR yes 71051707
chr3 129346390 129346401 E2F6 JASPAR yes 5672621
chr3 129346390 129346401 E2F6 JASPAR yes 71051708
chr3 129346391 129346412 ZNF263 JASPAR yes 5672622
chr3 129346391 129346412 ZNF263 JASPAR yes 71051709
chr3 129346392 129346400 SP1 TRANSFAC yes 5672623
chr3 129346392 129346400 SP1 TRANSFAC yes 71051710
chr3 129346392 129346413 ZNF263 JASPAR yes 5672624
chr3 129346392 129346413 ZNF263 JASPAR yes 71051711
chr3 129346394 129346400 MAZ TRANSFAC yes 5672625
chr3 129346394 129346400 MAZ TRANSFAC yes 71051712
chr3 129346394 129346405 E2F6 JASPAR yes 5672626
chr3 129346394 129346405 E2F6 JASPAR yes 71051713
chr3 129346396 129346404 SP1 TRANSFAC yes 5672627
chr3 129346396 129346404 SP1 TRANSFAC yes 71051714
chr3 129346398 129346404 MAZ TRANSFAC yes 5672628
chr3 129346398 129346404 MAZ TRANSFAC yes 71051715
chr3 129346398 129346409 E2F6 JASPAR yes 5672629
chr3 129346398 129346409 E2F6 JASPAR yes 71051716
chr3 129346400 129346408 SP1 TRANSFAC yes 5672630
chr3 129346400 129346408 SP1 TRANSFAC yes 71051717
chr3 129346402 129346408 MAZ TRANSFAC yes 5672631
chr3 129346402 129346408 MAZ TRANSFAC yes 71051718
chr3 129346402 129346413 E2F6 JASPAR yes 5672632
chr3 129346402 129346413 E2F6 JASPAR yes 71051719
chr3 129346404 129346412 SP1 TRANSFAC yes 5672633
chr3 129346404 129346412 SP1 TRANSFAC yes 71051720
chr3 129346406 129346412 MAZ TRANSFAC yes 5672634
chr3 129346406 129346412 MAZ TRANSFAC yes 71051721
chr3 129346410 129346414 LFA1 TRANSFAC yes 5672635
chr3 129346410 129346414 LFA1 TRANSFAC yes 71051722
chr3 129346422 129346427 SP1 TRANSFAC yes 5672636
chr3 129346422 129346427 SP1 TRANSFAC yes 71051723
chr3 129346426 129346430 ESR1 TRANSFAC yes 5672637
chr3 129346426 129346430 ESR1 TRANSFAC yes 71051724
chr3 129346434 129346448 PLAG1 JASPAR yes 5672638
chr3 129346434 129346448 PLAG1 JASPAR yes 71051725
chr3 129346463 129346478 ZIC3 JASPAR yes 5672639
chr3 129346463 129346478 ZIC4 JASPAR yes 5672640
chr3 129346463 129346478 ZIC3 JASPAR yes 71051726
chr3 129346463 129346478 ZIC4 JASPAR yes 71051727
chr3 129346464 129346478 ZIC1 JASPAR yes 5672641
chr3 129346464 129346478 ZIC1 JASPAR yes 71051728
chr3 129346481 129346496 TFAP2C JASPAR yes 5672642
chr3 129346481 129346496 TFAP2C JASPAR yes 71051729
SNP sites on vista42422[chr3:129346331-129346490]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 129346404 rs56131555 G A
E2F6 MAZ POLR2A SP1 ZNF263
7027510
Genes possibly regulated by vista42422[chr3:129346331-129346490]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 129247483 129254012 + RHO ENSG00000163914.4 129247483 0.85 1.0 4072 1152
chr3 129262057 129270310 + H1FOO ENSG00000178804.3 129262057 0.97 1.0 4073 15726
chr3 129274018 129325661 - PLXND1 ENSG00000004399.8 129325661 0.81 1.0 4074 79330
Expression level of Genes
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miRNAs possibly regulated by vista42422[chr3:129346331-129346490]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results