EnhancerDB
  1. Home
  2. Enhancers
  3. vista42428[chr3:129572979-129573244]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42428[chr3:129572979-129573244]
Back to top
Tissue distribution of vista42428
Back to top
Transcription factor that possibly regulate vista42428[chr3:129572979-129573244]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 129572968 129572979 FOSL2 JASPAR yes 5694398
chr3 129572968 129572979 FOSL2 JASPAR yes 71051930
chr3 129573007 129573013 ZNF354C JASPAR yes 5694399
chr3 129573007 129573013 ZNF354C JASPAR yes 71051931
chr3 129573020 129573024 H4TF2 TRANSFAC yes 5694400
chr3 129573020 129573024 H4TF2 TRANSFAC yes 71051932
chr3 129573046 129573058 YY1 JASPAR yes 5694401
chr3 129573046 129573058 YY1 JASPAR yes 71051933
chr3 129573050 129573061 CEBPB JASPAR yes 5694402
chr3 129573050 129573061 CEBPB JASPAR yes 71051934
chr3 129573061 129573065 NFE TRANSFAC yes 5694403
chr3 129573061 129573065 NFE TRANSFAC yes 71051935
chr3 129573067 129573082 MEF2C JASPAR yes 5694404
chr3 129573067 129573082 MEF2C JASPAR yes 71051936
chr3 129573069 129573089 RREB1 JASPAR yes 5694405
chr3 129573069 129573089 RREB1 JASPAR yes 71051937
chr3 129573091 129573105 CREB3 JASPAR yes 5694406
chr3 129573091 129573105 CREB3L1 JASPAR yes 5694407
chr3 129573091 129573105 CREB3 JASPAR yes 71051938
chr3 129573091 129573105 CREB3L1 JASPAR yes 71051939
chr3 129573103 129573116 ZBTB18 JASPAR yes 5694408
chr3 129573103 129573116 ZBTB18 JASPAR yes 71051940
chr3 129573132 129573150 MAFF JASPAR yes 5694409
chr3 129573132 129573150 MAFF JASPAR yes 71051941
chr3 129573160 129573170 MZF1 JASPAR yes 5694410
chr3 129573160 129573170 MZF1 JASPAR yes 71051942
chr3 129573160 129573181 ZNF263 JASPAR yes 5694411
chr3 129573160 129573181 ZNF263 JASPAR yes 71051943
chr3 129573161 129573175 PLAG1 JASPAR yes 5694412
chr3 129573161 129573175 PLAG1 JASPAR yes 71051944
chr3 129573162 129573167 SP1 TRANSFAC yes 5694413
chr3 129573162 129573167 SP1 TRANSFAC yes 71051945
chr3 129573163 129573173 GABPA JASPAR yes 5694414
chr3 129573163 129573173 GABPA JASPAR yes 71051946
chr3 129573165 129573171 ETS1 JASPAR yes 5694415
chr3 129573165 129573171 SPI1 JASPAR yes 5694416
chr3 129573165 129573171 ETS1 JASPAR yes 71051947
chr3 129573165 129573171 SPI1 JASPAR yes 71051948
chr3 129573170 129573183 ATF4 JASPAR yes 5694417
chr3 129573170 129573183 ATF4 JASPAR yes 71051949
chr3 129573179 129573187 NR4A2 JASPAR yes 5694418
chr3 129573179 129573187 NR4A2 JASPAR yes 71051950
chr3 129573182 129573192 SREBF1 JASPAR yes 5694419
chr3 129573182 129573192 SREBF2 JASPAR yes 5694420
chr3 129573182 129573192 SREBF1 JASPAR yes 71051951
chr3 129573182 129573192 SREBF2 JASPAR yes 71051952
chr3 129573187 129573199 GLI2 JASPAR yes 5694421
chr3 129573187 129573199 GLI2 JASPAR yes 71051953
chr3 129573203 129573222 PAX5 JASPAR yes 5694422
chr3 129573203 129573222 PAX5 JASPAR yes 71051954
chr3 129573205 129573209 LFA1 TRANSFAC yes 5694423
chr3 129573205 129573209 LFA1 TRANSFAC yes 71051955
chr3 129573225 129573240 MEF2C JASPAR yes 5694424
chr3 129573225 129573240 MEF2C JASPAR yes 71051956
chr3 129573225 129573246 IRF1 JASPAR yes 5694425
chr3 129573225 129573246 IRF1 JASPAR yes 71051957
chr3 129573229 129573250 IRF1 JASPAR yes 5694426
chr3 129573229 129573250 IRF1 JASPAR yes 71051958
chr3 129573230 129573245 FOXP1 JASPAR yes 5694427
chr3 129573230 129573245 FOXP1 JASPAR yes 71051959
chr3 129573230 129573251 IRF1 JASPAR yes 5694428
chr3 129573230 129573251 IRF1 JASPAR yes 71051960
chr3 129573231 129573252 IRF1 JASPAR yes 5694429
chr3 129573231 129573252 IRF1 JASPAR yes 71051961
chr3 129573235 129573250 FOXP1 JASPAR yes 5694430
chr3 129573235 129573250 FOXP1 JASPAR yes 71051962
chr3 129573235 129573256 IRF1 JASPAR yes 5694431
chr3 129573235 129573256 IRF1 JASPAR yes 71051963
chr3 129573236 129573251 FOXP1 JASPAR yes 5694432
chr3 129573236 129573251 FOXP1 JASPAR yes 71051964
chr3 129573236 129573257 IRF1 JASPAR yes 5694433
chr3 129573236 129573257 IRF1 JASPAR yes 71051965
chr3 129573237 129573252 FOXP1 JASPAR yes 5694434
chr3 129573237 129573252 FOXP1 JASPAR yes 71051966
chr3 129573237 129573258 IRF1 JASPAR yes 5694435
chr3 129573237 129573258 IRF1 JASPAR yes 71051967
chr3 129573238 129573253 FOXP1 JASPAR yes 5694436
chr3 129573238 129573253 FOXP1 JASPAR yes 71051968
chr3 129573240 129573255 FOXP1 JASPAR yes 5694437
chr3 129573240 129573255 FOXP1 JASPAR yes 71051969
chr3 129573241 129573262 IRF1 JASPAR yes 5694438
chr3 129573241 129573262 IRF1 JASPAR yes 71051970
chr3 129573242 129573257 FOXP1 JASPAR yes 5694439
chr3 129573242 129573257 FOXP1 JASPAR yes 71051971
chr3 129573243 129573264 IRF1 JASPAR yes 5694440
chr3 129573243 129573264 IRF1 JASPAR yes 71051972
SNP sites on vista42428[chr3:129572979-129573244]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 129573033 rs533241677 G A no 7029125
chr3 129573136 rs376442360 A G
MAFF
7029126
chr3 129573150 rs146999572 G A
MAFF
7029127
chr3 129573241 rs397991084 G GA
FOXP1 IRF1
7029128
chr3 129573241 rs71155578 G GA
FOXP1 IRF1
7029129
Genes possibly regulated by vista42428[chr3:129572979-129573244]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 129366635 129612419 - TMCC1 ENSG00000172765.12 129612419 0.7 1.0 4075 60825
Expression level of Genes
Back to top
miRNAs possibly regulated by vista42428[chr3:129572979-129573244]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results