EnhancerDB
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  3. vista42430[chr3:129636051-129636397]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42430[chr3:129636051-129636397]
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Tissue distribution of vista42430
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Transcription factor that possibly regulate vista42430[chr3:129636051-129636397]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 129636128 129636856 KAP1 UCSC Txn Factor no Conserved 108530370
chr3 129636144 129636707 SETDB1 UCSC Txn Factor no Conserved 108530371
chr3 129636373 129636537 CBX3 UCSC Txn Factor no Conserved 108530372
chr3 129636069 129636079 NFATC3 JASPAR yes 71051998
chr3 129636071 129636078 NFATC2 JASPAR yes 71051999
chr3 129636073 129636088 STAT2 JASPAR yes 71052000
chr3 129636085 129636092 SPIB JASPAR yes 71052001
chr3 129636088 129636102 NR2F1 JASPAR yes 71052002
chr3 129636091 129636097 TCF1 TRANSFAC yes 71052003
chr3 129636092 129636113 IRF1 JASPAR yes 71052004
chr3 129636094 129636109 PRDM1 JASPAR yes 71052005
chr3 129636094 129636109 STAT2 JASPAR yes 71052006
chr3 129636095 129636109 STAT1 JASPAR yes 71052007
chr3 129636108 129636123 HNF1A JASPAR yes 71052008
chr3 129636109 129636122 HNF1B JASPAR yes 71052009
chr3 129636112 129636126 ONECUT3 JASPAR yes 71052010
chr3 129636113 129636127 POU4F1 JASPAR yes 71052011
chr3 129636113 129636129 POU4F2 JASPAR yes 71052012
chr3 129636113 129636129 POU4F3 JASPAR yes 71052013
chr3 129636114 129636125 FOXC1 JASPAR yes 71052014
chr3 129636114 129636126 FOXC2 JASPAR yes 71052015
chr3 129636116 129636130 POU4F1 JASPAR yes 71052016
chr3 129636117 129636131 POU4F1 JASPAR yes 71052017
chr3 129636117 129636133 POU4F2 JASPAR yes 71052018
chr3 129636117 129636133 POU4F3 JASPAR yes 71052019
chr3 129636119 129636130 CDX2 JASPAR yes 71052020
chr3 129636156 129636177 IRF1 JASPAR yes 71052021
chr3 129636157 129636178 ZNF263 JASPAR yes 71052022
chr3 129636158 129636161 MYB TRANSFAC yes 71052023
chr3 129636158 129636169 FLI1 JASPAR yes 71052024
chr3 129636158 129636173 STAT2 JASPAR yes 71052025
chr3 129636159 129636169 ETV6 JASPAR yes 71052026
chr3 129636159 129636170 ELF5 JASPAR yes 71052027
chr3 129636159 129636172 ELF1 JASPAR yes 71052028
chr3 129636159 129636173 SPI1 JASPAR yes 71052029
chr3 129636159 129636173 SPIC JASPAR yes 71052030
chr3 129636160 129636167 SPI1 JASPAR yes 71052031
chr3 129636160 129636168 EHF JASPAR yes 71052032
chr3 129636161 129636182 ZNF263 JASPAR yes 71052033
chr3 129636162 129636169 SPIB JASPAR yes 71052034
chr3 129636168 129636173 ETS2 TRANSFAC yes 71052035
chr3 129636169 129636183 SPI1 JASPAR yes 71052036
chr3 129636169 129636183 SPIC JASPAR yes 71052037
chr3 129636169 129636187 SRF JASPAR yes 71052038
chr3 129636170 129636178 EHF JASPAR yes 71052039
chr3 129636171 129636187 SRF JASPAR yes 71052040
chr3 129636171 129636189 SRF JASPAR yes 71052041
chr3 129636172 129636177 ETS2 TRANSFAC yes 71052042
chr3 129636172 129636184 SRF JASPAR yes 71052043
chr3 129636174 129636186 SRF JASPAR yes 71052044
chr3 129636177 129636181 YY1 TRANSFAC yes 71052045
chr3 129636203 129636216 SCRT2 JASPAR yes 71052046
chr3 129636215 129636236 IRF1 JASPAR yes 71052047
chr3 129636217 129636228 FLI1 JASPAR yes 71052048
chr3 129636217 129636230 ELF3 JASPAR yes 71052049
chr3 129636218 129636228 ETV6 JASPAR yes 71052050
chr3 129636218 129636229 ELF5 JASPAR yes 71052051
chr3 129636218 129636230 EHF JASPAR yes 71052052
chr3 129636218 129636230 ELF4 JASPAR yes 71052053
chr3 129636218 129636231 ELF1 JASPAR yes 71052054
chr3 129636218 129636232 SPI1 JASPAR yes 71052055
chr3 129636218 129636232 SPIC JASPAR yes 71052056
chr3 129636219 129636226 SPI1 JASPAR yes 71052057
chr3 129636219 129636227 EHF JASPAR yes 71052058
chr3 129636221 129636228 SPIB JASPAR yes 71052059
chr3 129636221 129636242 IRF1 JASPAR yes 71052060
chr3 129636223 129636244 ZNF263 JASPAR yes 71052061
chr3 129636229 129636234 ETS2 TRANSFAC yes 71052062
chr3 129636229 129636244 LEF1 JASPAR yes 71052063
chr3 129636233 129636239 TCF4 TRANSFAC yes 71052064
chr3 129636249 129636267 SRF JASPAR yes 71052065
chr3 129636251 129636269 SRF JASPAR yes 71052066
chr3 129636256 129636260 YY1 TRANSFAC yes 71052067
chr3 129636282 129636286 H1TF2 TRANSFAC yes 71052068
chr3 129636282 129636286 NFE TRANSFAC yes 71052069
chr3 129636282 129636286 SRF TRANSFAC yes 71052070
chr3 129636308 129636312 H4TF2 TRANSFAC yes 71052071
chr3 129636363 129636368 GATA2 JASPAR yes 71052072
chr3 129636373 129636391 IRF2 JASPAR yes 71052073
chr3 129636379 129636393 POU4F1 JASPAR yes 71052074
chr3 129636379 129636394 FOXP1 JASPAR yes 71052075
SNP sites on vista42430[chr3:129636051-129636397]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 129636152 rs149945778 T C
KAP1 SETDB1
7029369
chr3 129636286 rs116646090 A G
H1TF2 KAP1 NFE SETDB1 SRF
7029370
chr3 129636314 rs58684785 G A
KAP1 SETDB1
7029371
chr3 129636394 rs540096283 C T
CBX3 FOXP1 KAP1 SETDB1
7029372
Genes possibly regulated by vista42430[chr3:129636051-129636397]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 129366635 129612419 - TMCC1 ENSG00000172765.12 129612419 0.7 1.0 4075 76368
chr3 129693148 129696781 + TRH ENSG00000170893.3 129693148 0.98 0.95 4076 43249
Expression level of Genes
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miRNAs possibly regulated by vista42430[chr3:129636051-129636397]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results