EnhancerDB
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  3. vista42435[chr3:130539887-130540309]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42435[chr3:130539887-130540309]
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Tissue distribution of vista42435
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Transcription factor that possibly regulate vista42435[chr3:130539887-130540309]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 130539771 130540227 JUND UCSC Txn Factor no Conserved 108530377
chr3 130539793 130540203 FOSL2 UCSC Txn Factor no Conserved 108530378
chr3 130539824 130540148 CEBPB UCSC Txn Factor no Conserved 108530379
chr3 130539842 130540126 FOS UCSC Txn Factor no Conserved 108530380
chr3 130539846 130540136 JUN UCSC Txn Factor no Conserved 108530381
chr3 130539849 130540165 EP300 UCSC Txn Factor no Conserved 108530382
chr3 130539885 130539898 TFAP2A JASPAR yes 5716972
chr3 130539885 130539898 TFAP2A JASPAR yes 71052344
chr3 130539892 130539912 ESR1 JASPAR yes 5716973
chr3 130539892 130539912 ESR1 JASPAR yes 71052345
chr3 130539932 130539947 JUND JASPAR yes 5716974
chr3 130539932 130539947 JUND JASPAR yes 71052346
chr3 130539933 130539946 JUN JASPAR yes 5716975
chr3 130539933 130539946 JUN JASPAR yes 71052347
chr3 130539934 130539947 ATF4 JASPAR yes 5716976
chr3 130539934 130539947 ATF4 JASPAR yes 71052348
chr3 130539934 130539948 ATF7 JASPAR yes 5716977
chr3 130539934 130539948 ATF7 JASPAR yes 71052349
chr3 130539935 130539947 HLF JASPAR yes 5716978
chr3 130539935 130539947 JDP2 JASPAR yes 5716979
chr3 130539935 130539947 HLF JASPAR yes 71052350
chr3 130539935 130539947 JDP2 JASPAR yes 71052351
chr3 130539937 130539948 NFIL3 JASPAR yes 5716980
chr3 130539937 130539948 NFIL3 JASPAR yes 71052352
chr3 130539949 130539958 HIC2 JASPAR yes 5716981
chr3 130539949 130539958 HIC2 JASPAR yes 71052353
chr3 130539952 130539956 LFA1 TRANSFAC yes 5716982
chr3 130539952 130539956 LFA1 TRANSFAC yes 71052354
chr3 130539955 130539970 TFAP2A JASPAR yes 5716983
chr3 130539955 130539970 TFAP2A JASPAR yes 71052355
chr3 130539956 130539963 SPI1 JASPAR yes 5716984
chr3 130539956 130539963 SPI1 JASPAR yes 71052356
chr3 130539973 130539977 H1TF2 TRANSFAC yes 5716985
chr3 130539973 130539977 NFE TRANSFAC yes 5716986
chr3 130539973 130539977 SRF TRANSFAC yes 5716987
chr3 130539973 130539977 H1TF2 TRANSFAC yes 71052357
chr3 130539973 130539977 NFE TRANSFAC yes 71052358
chr3 130539973 130539977 SRF TRANSFAC yes 71052359
chr3 130539973 130539984 BATF JASPAR yes 5716988
chr3 130539973 130539984 BATF JASPAR yes 71052360
chr3 130539974 130539985 FOSL2 JASPAR yes 5716989
chr3 130539974 130539985 JUNB JASPAR yes 5716990
chr3 130539974 130539985 FOSL2 JASPAR yes 71052361
chr3 130539974 130539985 JUNB JASPAR yes 71052362
chr3 130539975 130539986 FOS JASPAR yes 5716991
chr3 130539975 130539986 FOSL1 JASPAR yes 5716992
chr3 130539975 130539986 JUND JASPAR yes 5716993
chr3 130539975 130539986 NFE2 JASPAR yes 5716994
chr3 130539975 130539986 FOS JASPAR yes 71052363
chr3 130539975 130539986 FOSL1 JASPAR yes 71052364
chr3 130539975 130539986 JUND JASPAR yes 71052365
chr3 130539975 130539986 NFE2 JASPAR yes 71052366
chr3 130539976 130539985 JDP2 JASPAR yes 5716995
chr3 130539976 130539985 JDP2 JASPAR yes 71052367
chr3 130539976 130539987 FOSL2 JASPAR yes 5716996
chr3 130539976 130539987 JUNB JASPAR yes 5716997
chr3 130539976 130539987 FOSL2 JASPAR yes 71052368
chr3 130539976 130539987 JUNB JASPAR yes 71052369
chr3 130539976 130539990 JUN JASPAR yes 5716998
chr3 130539976 130539990 JUN JASPAR yes 71052370
chr3 130539980 130539990 TBX21 JASPAR yes 5716999
chr3 130539980 130539990 TBX21 JASPAR yes 71052371
chr3 130539981 130539989 MGA JASPAR yes 5717000
chr3 130539981 130539989 TBX15 JASPAR yes 5717001
chr3 130539981 130539989 TBX1 JASPAR yes 5717002
chr3 130539981 130539989 TBX4 JASPAR yes 5717003
chr3 130539981 130539989 TBX5 JASPAR yes 5717004
chr3 130539981 130539989 MGA JASPAR yes 71052372
chr3 130539981 130539989 TBX15 JASPAR yes 71052373
chr3 130539981 130539989 TBX1 JASPAR yes 71052374
chr3 130539981 130539989 TBX4 JASPAR yes 71052375
chr3 130539981 130539989 TBX5 JASPAR yes 71052376
chr3 130539987 130539998 CEBPB JASPAR yes 5717005
chr3 130539987 130539998 CEBPB JASPAR yes 71052377
chr3 130539987 130539999 HLF JASPAR yes 5717006
chr3 130539987 130539999 HLF JASPAR yes 71052378
chr3 130539988 130539999 CEBPA JASPAR yes 5717007
chr3 130539988 130539999 CEBPA JASPAR yes 71052379
chr3 130539993 130540001 OTX2 JASPAR yes 5717008
chr3 130539993 130540001 OTX2 JASPAR yes 71052380
chr3 130540004 130540015 NFIL3 JASPAR yes 5717009
chr3 130540004 130540015 NFIL3 JASPAR yes 71052381
chr3 130540005 130540017 DBP JASPAR yes 5717010
chr3 130540005 130540017 HLF JASPAR yes 5717011
chr3 130540005 130540017 TEF JASPAR yes 5717012
chr3 130540005 130540017 DBP JASPAR yes 71052382
chr3 130540005 130540017 HLF JASPAR yes 71052383
chr3 130540005 130540017 TEF JASPAR yes 71052384
chr3 130540007 130540018 NFIL3 JASPAR yes 5717013
chr3 130540007 130540018 NFIL3 JASPAR yes 71052385
chr3 130540034 130540044 NFATC3 JASPAR yes 5717014
chr3 130540034 130540044 NFATC3 JASPAR yes 71052386
chr3 130540056 130540059 MYB TRANSFAC yes 5717015
chr3 130540056 130540059 MYB TRANSFAC yes 71052387
chr3 130540074 130540091 ZNF410 JASPAR yes 5717016
chr3 130540074 130540091 ZNF410 JASPAR yes 71052388
chr3 130540081 130540091 TEAD1 JASPAR yes 5717017
chr3 130540081 130540091 TEAD4 JASPAR yes 5717018
chr3 130540081 130540091 TEAD1 JASPAR yes 71052389
chr3 130540081 130540091 TEAD4 JASPAR yes 71052390
chr3 130540082 130540090 TEAD3 JASPAR yes 5717019
chr3 130540082 130540090 TEAD3 JASPAR yes 71052391
chr3 130540098 130540108 TEAD1 JASPAR yes 5717020
chr3 130540098 130540108 TEAD4 JASPAR yes 5717021
chr3 130540098 130540108 TEAD1 JASPAR yes 71052392
chr3 130540098 130540108 TEAD4 JASPAR yes 71052393
chr3 130540099 130540107 TEAD3 JASPAR yes 5717022
chr3 130540099 130540107 TEAD3 JASPAR yes 71052394
chr3 130540101 130540112 PHOX2A JASPAR yes 5717023
chr3 130540101 130540112 PHOX2A JASPAR yes 71052395
chr3 130540104 130540114 HOXA2 JASPAR yes 5717024
chr3 130540104 130540114 MEOX1 JASPAR yes 5717025
chr3 130540104 130540114 HOXA2 JASPAR yes 71052396
chr3 130540104 130540114 MEOX1 JASPAR yes 71052397
chr3 130540106 130540117 PHOX2A JASPAR yes 5717026
chr3 130540106 130540117 PHOX2A JASPAR yes 71052398
chr3 130540106 130540120 CREB3 JASPAR yes 5717027
chr3 130540106 130540120 CREB3L1 JASPAR yes 5717028
chr3 130540106 130540120 CREB3 JASPAR yes 71052399
chr3 130540106 130540120 CREB3L1 JASPAR yes 71052400
chr3 130540107 130540121 XBP1 JASPAR yes 5717029
chr3 130540107 130540121 XBP1 JASPAR yes 71052401
chr3 130540112 130540125 ATF4 JASPAR yes 5717030
chr3 130540112 130540125 ATF4 JASPAR yes 71052402
chr3 130540114 130540130 SRF JASPAR yes 5717031
chr3 130540114 130540130 SRF JASPAR yes 71052403
chr3 130540115 130540127 SRF JASPAR yes 5717032
chr3 130540115 130540127 SRF JASPAR yes 71052404
chr3 130540117 130540121 YY1 TRANSFAC yes 5717033
chr3 130540117 130540121 YY1 TRANSFAC yes 71052405
chr3 130540148 130540164 POU4F3 JASPAR yes 5717034
chr3 130540148 130540164 POU4F3 JASPAR yes 71052406
chr3 130540150 130540164 POU4F1 JASPAR yes 5717035
chr3 130540150 130540164 POU4F1 JASPAR yes 71052407
chr3 130540151 130540165 POU4F1 JASPAR yes 5717036
chr3 130540151 130540165 POU4F1 JASPAR yes 71052408
chr3 130540155 130540169 PAX6 JASPAR yes 5717037
chr3 130540155 130540169 PAX6 JASPAR yes 71052409
chr3 130540158 130540172 POU4F1 JASPAR yes 5717038
chr3 130540158 130540172 POU4F1 JASPAR yes 71052410
chr3 130540180 130540184 TEAD2 TRANSFAC yes 5717039
chr3 130540180 130540184 TEAD2 TRANSFAC yes 71052411
chr3 130540180 130540185 TBP TRANSFAC yes 5717040
chr3 130540180 130540185 TBP TRANSFAC yes 71052412
chr3 130540180 130540186 TFIID TRANSFAC yes 5717041
chr3 130540180 130540186 TFIID TRANSFAC yes 71052413
chr3 130540193 130540203 HMBOX1 JASPAR yes 5717042
chr3 130540193 130540203 HMBOX1 JASPAR yes 71052414
chr3 130540197 130540207 HMBOX1 JASPAR yes 5717043
chr3 130540197 130540207 HMBOX1 JASPAR yes 71052415
chr3 130540198 130540206 LBX1 JASPAR yes 5717044
chr3 130540198 130540206 LBX1 JASPAR yes 71052416
chr3 130540199 130540202 MYB TRANSFAC yes 5717045
chr3 130540199 130540202 MYB TRANSFAC yes 71052417
chr3 130540205 130540218 SMAD2 JASPAR yes 5717046
chr3 130540205 130540218 SMAD2 JASPAR yes 71052418
chr3 130540215 130540221 TCF4 TRANSFAC yes 5717047
chr3 130540215 130540221 TCF4 TRANSFAC yes 71052419
chr3 130540225 130540240 FOXP1 JASPAR yes 5717048
chr3 130540225 130540240 FOXP1 JASPAR yes 71052420
chr3 130540227 130540239 FOXC2 JASPAR yes 5717049
chr3 130540227 130540239 FOXC2 JASPAR yes 71052421
chr3 130540228 130540239 FOXP2 JASPAR yes 5717050
chr3 130540228 130540239 FOXP2 JASPAR yes 71052422
chr3 130540230 130540241 FOXA1 JASPAR yes 5717051
chr3 130540230 130540241 FOXA1 JASPAR yes 71052423
chr3 130540232 130540244 FOXI1 JASPAR yes 5717052
chr3 130540232 130540244 FOXI1 JASPAR yes 71052424
chr3 130540245 130540249 TEAD2 TRANSFAC yes 5717053
chr3 130540245 130540249 TEAD2 TRANSFAC yes 71052425
chr3 130540245 130540250 TBP TRANSFAC yes 5717054
chr3 130540245 130540250 TBP TRANSFAC yes 71052426
chr3 130540251 130540255 NFE TRANSFAC yes 5717055
chr3 130540251 130540255 NFE TRANSFAC yes 71052427
chr3 130540251 130540256 GATA1 TRANSFAC yes 5717056
chr3 130540251 130540256 GATA1 TRANSFAC yes 71052428
chr3 130540251 130540257 GATA3 JASPAR yes 5717057
chr3 130540251 130540257 GATA3 JASPAR yes 71052429
chr3 130540263 130540277 PLAG1 JASPAR yes 5717058
chr3 130540263 130540277 PLAG1 JASPAR yes 71052430
chr3 130540266 130540276 NEUROD2 JASPAR yes 5717059
chr3 130540266 130540276 OLIG2 JASPAR yes 5717060
chr3 130540266 130540276 OLIG3 JASPAR yes 5717061
chr3 130540266 130540276 NEUROD2 JASPAR yes 71052431
chr3 130540266 130540276 OLIG2 JASPAR yes 71052432
chr3 130540266 130540276 OLIG3 JASPAR yes 71052433
chr3 130540274 130540280 PEA3 TRANSFAC yes 5717062
chr3 130540274 130540280 PEA3 TRANSFAC yes 71052434
chr3 130540274 130540290 ZNF143 JASPAR yes 5717063
chr3 130540274 130540290 ZNF143 JASPAR yes 71052435
chr3 130540278 130540292 RORA JASPAR yes 5717064
chr3 130540278 130540292 RORA JASPAR yes 71052436
chr3 130540284 130540290 ESR1 TRANSFAC yes 5717065
chr3 130540284 130540290 ESR1 TRANSFAC yes 71052437
chr3 130540285 130540302 RARA JASPAR yes 5717066
chr3 130540285 130540302 RARA JASPAR yes 71052438
chr3 130540286 130540290 ESR1 TRANSFAC yes 5717067
chr3 130540286 130540290 ESR1 TRANSFAC yes 71052439
chr3 130540297 130540314 RARA JASPAR yes 5717068
chr3 130540297 130540314 RARA JASPAR yes 71052440
SNP sites on vista42435[chr3:130539887-130540309]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 130540065 rs185691100 A G
CEBPB EP300 FOS FOSL2 JUN JUND
7031668
Genes possibly regulated by vista42435[chr3:130539887-130540309]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 130397779 130465673 - PIK3R4 ENSG00000196455.3 130465673 0.67 0.99 4079 25786
chr3 130569439 130735556 + ATP2C1 ENSG00000017260.15 130569439 0.75 0.99 4080 70870
Expression level of Genes
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miRNAs possibly regulated by vista42435[chr3:130539887-130540309]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results