EnhancerDB
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  3. vista42436[chr3:130558055-130558328]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42436[chr3:130558055-130558328]
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Tissue distribution of vista42436
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Transcription factor that possibly regulate vista42436[chr3:130558055-130558328]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 130558045 130558066 IRF1 JASPAR yes 5719427
chr3 130558045 130558066 IRF1 JASPAR yes 71052441
chr3 130558078 130558084 TBP TRANSFAC yes 5719428
chr3 130558078 130558084 TBP TRANSFAC yes 71052442
chr3 130558147 130558161 SPI1 JASPAR yes 5719429
chr3 130558147 130558161 SPIC JASPAR yes 5719430
chr3 130558147 130558161 SPI1 JASPAR yes 71052443
chr3 130558147 130558161 SPIC JASPAR yes 71052444
chr3 130558147 130558162 AR JASPAR yes 5719431
chr3 130558147 130558162 AR JASPAR yes 71052445
chr3 130558148 130558161 ELF1 JASPAR yes 5719432
chr3 130558148 130558161 ELF1 JASPAR yes 71052446
chr3 130558149 130558170 IRF1 JASPAR yes 5719433
chr3 130558149 130558170 IRF1 JASPAR yes 71052447
chr3 130558150 130558161 ELF5 JASPAR yes 5719434
chr3 130558150 130558161 ETV2 JASPAR yes 5719435
chr3 130558150 130558161 ELF5 JASPAR yes 71052448
chr3 130558150 130558161 ETV2 JASPAR yes 71052449
chr3 130558151 130558161 ERF JASPAR yes 5719436
chr3 130558151 130558161 ETS1 JASPAR yes 5719437
chr3 130558151 130558161 ERF JASPAR yes 71052450
chr3 130558151 130558161 ETS1 JASPAR yes 71052451
chr3 130558151 130558162 FLI1 JASPAR yes 5719438
chr3 130558151 130558162 FLI1 JASPAR yes 71052452
chr3 130558153 130558167 STAT1 JASPAR yes 5719439
chr3 130558153 130558167 STAT1 JASPAR yes 71052453
chr3 130558153 130558168 STAT2 JASPAR yes 5719440
chr3 130558153 130558168 STAT2 JASPAR yes 71052454
chr3 130558154 130558166 IRF1 JASPAR yes 5719441
chr3 130558154 130558166 IRF1 JASPAR yes 71052455
chr3 130558155 130558176 IRF1 JASPAR yes 5719442
chr3 130558155 130558176 IRF1 JASPAR yes 71052456
chr3 130558159 130558177 SRF JASPAR yes 5719443
chr3 130558159 130558177 SRF JASPAR yes 71052457
chr3 130558165 130558171 TBP TRANSFAC yes 5719444
chr3 130558165 130558171 TBP TRANSFAC yes 71052458
chr3 130558170 130558175 ETS2 TRANSFAC yes 5719445
chr3 130558170 130558175 ETS2 TRANSFAC yes 71052459
chr3 130558179 130558200 ZNF263 JASPAR yes 5719446
chr3 130558179 130558200 ZNF263 JASPAR yes 71052460
chr3 130558190 130558195 ETS2 TRANSFAC yes 5719447
chr3 130558190 130558195 ETS2 TRANSFAC yes 71052461
chr3 130558191 130558205 IRF7 JASPAR yes 5719448
chr3 130558191 130558205 IRF7 JASPAR yes 71052462
chr3 130558193 130558214 IRF1 JASPAR yes 5719449
chr3 130558193 130558214 IRF1 JASPAR yes 71052463
chr3 130558195 130558210 STAT2 JASPAR yes 5719450
chr3 130558195 130558210 STAT2 JASPAR yes 71052464
chr3 130558196 130558210 SPIC JASPAR yes 5719451
chr3 130558196 130558210 STAT1 JASPAR yes 5719452
chr3 130558196 130558210 SPIC JASPAR yes 71052465
chr3 130558196 130558210 STAT1 JASPAR yes 71052466
chr3 130558197 130558211 IRF7 JASPAR yes 5719453
chr3 130558197 130558211 IRF8 JASPAR yes 5719454
chr3 130558197 130558211 IRF7 JASPAR yes 71052467
chr3 130558197 130558211 IRF8 JASPAR yes 71052468
chr3 130558197 130558212 IRF9 JASPAR yes 5719455
chr3 130558197 130558212 IRF9 JASPAR yes 71052469
chr3 130558207 130558217 NFATC3 JASPAR yes 5719456
chr3 130558207 130558217 NFATC3 JASPAR yes 71052470
chr3 130558214 130558228 NR2F1 JASPAR yes 5719457
chr3 130558214 130558228 NR2F1 JASPAR yes 71052471
chr3 130558215 130558221 NFIC JASPAR yes 5719458
chr3 130558215 130558221 NFIC JASPAR yes 71052472
chr3 130558226 130558237 YY2 JASPAR yes 5719459
chr3 130558226 130558237 YY2 JASPAR yes 71052473
chr3 130558229 130558234 TFAP2A TRANSFAC yes 5719460
chr3 130558229 130558234 TFAP2A TRANSFAC yes 71052474
chr3 130558229 130558235 MZF1 JASPAR yes 5719461
chr3 130558229 130558235 MZF1 JASPAR yes 71052475
chr3 130558232 130558244 TAL1 JASPAR yes 5719462
chr3 130558232 130558244 TAL1 JASPAR yes 71052476
chr3 130558233 130558246 ZBTB18 JASPAR yes 5719463
chr3 130558233 130558246 ZBTB18 JASPAR yes 71052477
chr3 130558234 130558244 MSC JASPAR yes 5719464
chr3 130558234 130558244 MYF6 JASPAR yes 5719465
chr3 130558234 130558244 TFAP4 JASPAR yes 5719466
chr3 130558234 130558244 MSC JASPAR yes 71052478
chr3 130558234 130558244 MYF6 JASPAR yes 71052479
chr3 130558234 130558244 TFAP4 JASPAR yes 71052480
chr3 130558278 130558286 FOXC1 JASPAR yes 5719467
chr3 130558278 130558286 FOXC1 JASPAR yes 71052481
chr3 130558280 130558287 POU2F1 TRANSFAC yes 5719468
chr3 130558280 130558287 POU2F1 TRANSFAC yes 71052482
chr3 130558286 130558304 NR3C1 JASPAR yes 5719469
chr3 130558286 130558304 NR3C1 JASPAR yes 71052483
chr3 130558321 130558324 MYB TRANSFAC yes 5719470
chr3 130558321 130558324 MYB TRANSFAC yes 71052484
chr3 130558321 130558332 PHOX2A JASPAR yes 5719471
chr3 130558321 130558332 PROP1 JASPAR yes 5719472
chr3 130558321 130558332 PHOX2A JASPAR yes 71052485
chr3 130558321 130558332 PROP1 JASPAR yes 71052486
chr3 130558323 130558338 HNF1A JASPAR yes 5719473
chr3 130558323 130558338 HNF1A JASPAR yes 71052487
chr3 130558324 130558337 HNF1B JASPAR yes 5719474
chr3 130558324 130558337 HNF1B JASPAR yes 71052488
chr3 130558327 130558337 HESX1 JASPAR yes 5719475
chr3 130558327 130558337 RAX JASPAR yes 5719476
chr3 130558327 130558337 HESX1 JASPAR yes 71052489
chr3 130558327 130558337 RAX JASPAR yes 71052490
chr3 130558328 130558336 DLX6 JASPAR yes 5719477
chr3 130558328 130558336 MSX2 JASPAR yes 5719478
chr3 130558328 130558336 DLX6 JASPAR yes 71052491
chr3 130558328 130558336 MSX2 JASPAR yes 71052492
chr3 130558328 130558342 POU1F1 JASPAR yes 5719479
chr3 130558328 130558342 POU1F1 JASPAR yes 71052493
SNP sites on vista42436[chr3:130558055-130558328]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 130558251 rs201937807 GA G no 7031885
Genes possibly regulated by vista42436[chr3:130558055-130558328]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 130397779 130465673 - PIK3R4 ENSG00000196455.3 130465673 0.67 0.99 4079 7618
chr3 130569439 130735556 + ATP2C1 ENSG00000017260.15 130569439 0.75 0.99 4080 88889
Expression level of Genes
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miRNAs possibly regulated by vista42436[chr3:130558055-130558328]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results