EnhancerDB
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  3. vista42437[chr3:130560260-130560548]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42437[chr3:130560260-130560548]
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Tissue distribution of vista42437
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Transcription factor that possibly regulate vista42437[chr3:130560260-130560548]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 130560263 130560267 TEAD2 TRANSFAC yes 5719903
chr3 130560263 130560267 TEAD2 TRANSFAC yes 71052494
chr3 130560265 130560276 PHOX2A JASPAR yes 5719904
chr3 130560265 130560276 PROP1 JASPAR yes 5719905
chr3 130560265 130560276 PHOX2A JASPAR yes 71052495
chr3 130560265 130560276 PROP1 JASPAR yes 71052496
chr3 130560267 130560277 TEAD1 JASPAR yes 5719906
chr3 130560267 130560277 TEAD4 JASPAR yes 5719907
chr3 130560267 130560277 TEAD1 JASPAR yes 71052497
chr3 130560267 130560277 TEAD4 JASPAR yes 71052498
chr3 130560274 130560289 RUNX2 JASPAR yes 5719908
chr3 130560274 130560289 RUNX2 JASPAR yes 71052499
chr3 130560277 130560288 RUNX1 JASPAR yes 5719909
chr3 130560277 130560288 RUNX1 JASPAR yes 71052500
chr3 130560307 130560318 FLI1 JASPAR yes 5719910
chr3 130560307 130560318 FLI1 JASPAR yes 71052501
chr3 130560308 130560316 EHF JASPAR yes 5719911
chr3 130560308 130560316 EHF JASPAR yes 71052502
chr3 130560311 130560322 FLI1 JASPAR yes 5719912
chr3 130560311 130560322 FLI1 JASPAR yes 71052503
chr3 130560312 130560317 ETS2 TRANSFAC yes 5719913
chr3 130560312 130560317 ETS2 TRANSFAC yes 71052504
chr3 130560312 130560320 FEV JASPAR yes 5719914
chr3 130560312 130560320 FEV JASPAR yes 71052505
chr3 130560336 130560341 ETS2 TRANSFAC yes 5719915
chr3 130560336 130560341 ETS2 TRANSFAC yes 71052506
chr3 130560352 130560361 JDP2 JASPAR yes 5719916
chr3 130560352 130560361 JDP2 JASPAR yes 71052507
chr3 130560360 130560365 TFAP2A TRANSFAC yes 5719917
chr3 130560360 130560365 TFAP2A TRANSFAC yes 71052508
chr3 130560360 130560366 MZF1 JASPAR yes 5719918
chr3 130560360 130560366 MZF1 JASPAR yes 71052509
chr3 130560412 130560427 MEF2C JASPAR yes 5719919
chr3 130560412 130560427 MEF2C JASPAR yes 71052510
chr3 130560413 130560428 MEF2A JASPAR yes 5719920
chr3 130560413 130560428 MEF2A JASPAR yes 71052511
chr3 130560414 130560426 MEF2B JASPAR yes 5719921
chr3 130560414 130560426 MEF2B JASPAR yes 71052512
chr3 130560423 130560433 POU6F2 JASPAR yes 5719922
chr3 130560423 130560433 POU6F2 JASPAR yes 71052513
chr3 130560424 130560434 EMX1 JASPAR yes 5719923
chr3 130560424 130560434 NOTO JASPAR yes 5719924
chr3 130560424 130560434 EMX1 JASPAR yes 71052514
chr3 130560424 130560434 NOTO JASPAR yes 71052515
chr3 130560427 130560431 YY1 TRANSFAC yes 5719925
chr3 130560427 130560431 YY1 TRANSFAC yes 71052516
chr3 130560427 130560438 FOSL1 JASPAR yes 5719926
chr3 130560427 130560438 JUND JASPAR yes 5719927
chr3 130560427 130560438 FOSL1 JASPAR yes 71052517
chr3 130560427 130560438 JUND JASPAR yes 71052518
chr3 130560428 130560439 JUNB JASPAR yes 5719928
chr3 130560428 130560439 JUNB JASPAR yes 71052519
chr3 130560440 130560455 MEF2C JASPAR yes 5719929
chr3 130560440 130560455 MEF2C JASPAR yes 71052520
chr3 130560441 130560456 MEF2A JASPAR yes 5719930
chr3 130560441 130560456 MEF2A JASPAR yes 71052521
chr3 130560442 130560454 MEF2A JASPAR yes 5719931
chr3 130560442 130560454 MEF2A JASPAR yes 71052522
chr3 130560443 130560453 MEF2A JASPAR yes 5719932
chr3 130560443 130560453 MEF2A JASPAR yes 71052523
chr3 130560454 130560469 JUND JASPAR yes 5719933
chr3 130560454 130560469 JUND JASPAR yes 71052524
chr3 130560456 130560470 BATF3 JASPAR yes 5719934
chr3 130560456 130560470 BATF3 JASPAR yes 71052525
chr3 130560459 130560466 JUN TRANSFAC yes 5719935
chr3 130560459 130560466 JUN TRANSFAC yes 71052526
chr3 130560459 130560473 TCF7L2 JASPAR yes 5719936
chr3 130560459 130560473 TCF7L2 JASPAR yes 71052527
chr3 130560459 130560474 LEF1 JASPAR yes 5719937
chr3 130560459 130560474 LEF1 JASPAR yes 71052528
chr3 130560468 130560483 SCRT1 JASPAR yes 5719938
chr3 130560468 130560483 SCRT1 JASPAR yes 71052529
chr3 130560470 130560483 SCRT2 JASPAR yes 5719939
chr3 130560470 130560483 SCRT2 JASPAR yes 71052530
chr3 130560472 130560492 RREB1 JASPAR yes 5719940
chr3 130560472 130560492 RREB1 JASPAR yes 71052531
SNP sites on vista42437[chr3:130560260-130560548]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 130560425 rs145108710 G A
EMX1 MEF2A MEF2B MEF2C NOTO POU6F2
7031910
chr3 130560476 rs192093256 T G
RREB1 SCRT1 SCRT2
7031911
Genes possibly regulated by vista42437[chr3:130560260-130560548]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 130397779 130465673 - PIK3R4 ENSG00000196455.3 130465673 0.67 0.99 4079 5413
chr3 130569439 130735556 + ATP2C1 ENSG00000017260.15 130569439 0.75 0.99 4080 91109
Expression level of Genes
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miRNAs possibly regulated by vista42437[chr3:130560260-130560548]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results