EnhancerDB
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  3. vista42439[chr3:130576586-130576789]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42439[chr3:130576586-130576789]
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Tissue distribution of vista42439
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Transcription factor that possibly regulate vista42439[chr3:130576586-130576789]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 130576622 130576637 FOXA1 JASPAR yes 71052532
chr3 130576623 130576628 GATA2 JASPAR yes 71052533
chr3 130576624 130576637 POU2F2 JASPAR yes 71052534
chr3 130576624 130576638 POU1F1 JASPAR yes 71052535
chr3 130576625 130576636 FOXB1 JASPAR yes 71052536
chr3 130576625 130576636 FOXC1 JASPAR yes 71052537
chr3 130576625 130576637 POU3F1 JASPAR yes 71052538
chr3 130576625 130576637 POU3F2 JASPAR yes 71052539
chr3 130576625 130576638 POU3F3 JASPAR yes 71052540
chr3 130576626 130576630 YY1 TRANSFAC yes 71052541
chr3 130576626 130576637 FOXA1 JASPAR yes 71052542
chr3 130576626 130576638 POU2F1 JASPAR yes 71052543
chr3 130576627 130576634 POU2F1 TRANSFAC yes 71052544
chr3 130576627 130576634 POU2F2C TRANSFAC yes 71052545
chr3 130576627 130576634 POU2F2 TRANSFAC yes 71052546
chr3 130576627 130576635 POU2F1 TRANSFAC yes 71052547
chr3 130576627 130576636 POU3F4 JASPAR yes 71052548
chr3 130576627 130576636 POU5F1B JASPAR yes 71052549
chr3 130576629 130576643 POU4F1 JASPAR yes 71052550
chr3 130576629 130576645 POU4F2 JASPAR yes 71052551
chr3 130576629 130576645 POU4F3 JASPAR yes 71052552
chr3 130576633 130576650 ZNF410 JASPAR yes 71052553
chr3 130576638 130576648 MZF1 JASPAR yes 71052554
chr3 130576641 130576646 TFAP2A TRANSFAC yes 71052555
chr3 130576641 130576647 MZF1 JASPAR yes 71052556
chr3 130576646 130576656 HOXA13 JASPAR yes 71052557
chr3 130576646 130576656 HOXB13 JASPAR yes 71052558
chr3 130576646 130576656 HOXD13 JASPAR yes 71052559
chr3 130576658 130576669 BATF JASPAR yes 71052560
chr3 130576660 130576671 FOSL1 JASPAR yes 71052561
chr3 130576664 130576675 USF2 JASPAR yes 71052562
chr3 130576665 130576675 TFEC JASPAR yes 71052563
chr3 130576668 130576679 FOSL2 JASPAR yes 71052564
chr3 130576668 130576679 JUNB JASPAR yes 71052565
chr3 130576669 130576680 FOS JASPAR yes 71052566
chr3 130576669 130576680 FOSL1 JASPAR yes 71052567
chr3 130576669 130576680 JUND JASPAR yes 71052568
chr3 130576669 130576680 NFE2 JASPAR yes 71052569
chr3 130576670 130576679 JDP2 JASPAR yes 71052570
chr3 130576670 130576681 FOSL2 JASPAR yes 71052571
chr3 130576670 130576681 JUNB JASPAR yes 71052572
chr3 130576670 130576684 JUN JASPAR yes 71052573
chr3 130576688 130576701 NFKB2 JASPAR yes 71052574
chr3 130576692 130576709 ZNF410 JASPAR yes 71052575
chr3 130576724 130576737 ELF1 JASPAR yes 71052576
chr3 130576725 130576738 ELF3 JASPAR yes 71052577
chr3 130576728 130576733 ETS2 TRANSFAC yes 71052578
chr3 130576728 130576736 FEV JASPAR yes 71052579
chr3 130576729 130576736 SPI1 JASPAR yes 71052580
chr3 130576750 130576761 RUNX1 JASPAR yes 71052581
chr3 130576764 130576769 ETS2 TRANSFAC yes 71052582
SNP sites on vista42439[chr3:130576586-130576789]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 130576632 rs559212436 G T
FOXA1 FOXB1 FOXC1 POU1F1 POU2F1 POU2F2 POU2F2C POU3F1 POU3F2 POU3F3 POU3F4 POU4F1 POU4F2 POU4F3 POU5F1B
7031947
chr3 130576681 rs574765216 C G,T
FOSL2 JUN JUNB
7031948
chr3 130576682 rs377152840 G A,C
JUN
7031949
chr3 130576697 rs28495344 T A
NFKB2 ZNF410
7031950
chr3 130576710 rs149026543 C T no 7031951
Genes possibly regulated by vista42439[chr3:130576586-130576789]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 130569439 130735556 + ATP2C1 ENSG00000017260.15 130569439 0.75 0.99 4080 92853
Expression level of Genes
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miRNAs possibly regulated by vista42439[chr3:130576586-130576789]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results