EnhancerDB
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  3. vista42472[chr3:133188180-133188542]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42472[chr3:133188180-133188542]
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Tissue distribution of vista42472
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Transcription factor that possibly regulate vista42472[chr3:133188180-133188542]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 133188144 133188411 FOXA1 UCSC Txn Factor no Conserved 108530394
chr3 133188147 133188385 FOXA2 UCSC Txn Factor no Conserved 108530395
chr3 133188193 133188632 RELA UCSC Txn Factor no Conserved 108530396
chr3 133188264 133188580 EBF1 UCSC Txn Factor no Conserved 108530397
chr3 133188203 133188214 NFIL3 JASPAR yes 5830466
chr3 133188203 133188214 NFIL3 JASPAR yes 71053648
chr3 133188204 133188216 DBP JASPAR yes 5830467
chr3 133188204 133188216 DBP JASPAR yes 71053649
chr3 133188206 133188217 NFIL3 JASPAR yes 5830468
chr3 133188206 133188217 NFIL3 JASPAR yes 71053650
chr3 133188209 133188213 TEAD2 TRANSFAC yes 5830469
chr3 133188209 133188213 TEAD2 TRANSFAC yes 71053651
chr3 133188253 133188259 NFIC JASPAR yes 5830470
chr3 133188253 133188259 NFIC JASPAR yes 71053652
chr3 133188255 133188259 H1TF2 TRANSFAC yes 5830471
chr3 133188255 133188259 NFE TRANSFAC yes 5830472
chr3 133188255 133188259 SRF TRANSFAC yes 5830473
chr3 133188255 133188259 H1TF2 TRANSFAC yes 71053653
chr3 133188255 133188259 NFE TRANSFAC yes 71053654
chr3 133188255 133188259 SRF TRANSFAC yes 71053655
chr3 133188263 133188278 FOXA1 JASPAR yes 5830474
chr3 133188263 133188278 FOXA1 JASPAR yes 71053656
chr3 133188265 133188278 POU2F2 JASPAR yes 5830475
chr3 133188265 133188278 POU2F2 JASPAR yes 71053657
chr3 133188267 133188271 YY1 TRANSFAC yes 5830476
chr3 133188267 133188271 YY1 TRANSFAC yes 71053658
chr3 133188267 133188278 FOXA1 JASPAR yes 5830477
chr3 133188267 133188278 FOXA1 JASPAR yes 71053659
chr3 133188268 133188275 POU2F1 TRANSFAC yes 5830478
chr3 133188268 133188275 POU2F2C TRANSFAC yes 5830479
chr3 133188268 133188275 POU2F2 TRANSFAC yes 5830480
chr3 133188268 133188275 POU2F1 TRANSFAC yes 71053660
chr3 133188268 133188275 POU2F2C TRANSFAC yes 71053661
chr3 133188268 133188275 POU2F2 TRANSFAC yes 71053662
chr3 133188268 133188276 POU2F1 TRANSFAC yes 5830481
chr3 133188268 133188276 POU2F1 TRANSFAC yes 71053663
chr3 133188268 133188277 POU3F4 JASPAR yes 5830482
chr3 133188268 133188277 POU5F1B JASPAR yes 5830483
chr3 133188268 133188277 POU3F4 JASPAR yes 71053664
chr3 133188268 133188277 POU5F1B JASPAR yes 71053665
chr3 133188312 133188327 HNF4A JASPAR yes 5830484
chr3 133188312 133188327 HNF4A JASPAR yes 71053666
chr3 133188369 133188380 ESRRA JASPAR yes 5830485
chr3 133188369 133188380 ESRRB JASPAR yes 5830486
chr3 133188369 133188380 ESRRA JASPAR yes 71053667
chr3 133188369 133188380 ESRRB JASPAR yes 71053668
chr3 133188371 133188379 NR4A2 JASPAR yes 5830487
chr3 133188371 133188379 NR4A2 JASPAR yes 71053669
chr3 133188373 133188377 ESR1 TRANSFAC yes 5830488
chr3 133188373 133188377 ESR1 TRANSFAC yes 71053670
chr3 133188379 133188383 YY1 TRANSFAC yes 5830489
chr3 133188379 133188383 YY1 TRANSFAC yes 71053671
chr3 133188379 133188393 IRF7 JASPAR yes 5830490
chr3 133188379 133188393 IRF7 JASPAR yes 71053672
chr3 133188387 133188402 HSF1 JASPAR yes 5830491
chr3 133188387 133188402 HSF1 JASPAR yes 71053673
chr3 133188388 133188401 HSF2 JASPAR yes 5830492
chr3 133188388 133188401 HSF2 JASPAR yes 71053674
chr3 133188396 133188407 CEBPA JASPAR yes 5830493
chr3 133188396 133188407 CEBPA JASPAR yes 71053675
chr3 133188397 133188407 CEBPB JASPAR yes 5830494
chr3 133188397 133188407 CEBPD JASPAR yes 5830495
chr3 133188397 133188407 CEBPE JASPAR yes 5830496
chr3 133188397 133188407 CEBPB JASPAR yes 71053676
chr3 133188397 133188407 CEBPD JASPAR yes 71053677
chr3 133188397 133188407 CEBPE JASPAR yes 71053678
chr3 133188397 133188408 CEBPB JASPAR yes 5830497
chr3 133188397 133188408 CEBPB JASPAR yes 71053679
chr3 133188410 133188420 NFKB1 JASPAR yes 5830498
chr3 133188410 133188420 NFKB1 JASPAR yes 71053680
chr3 133188425 133188436 EBF1 JASPAR yes 5830499
chr3 133188425 133188436 EBF1 JASPAR yes 71053681
chr3 133188478 133188499 REST JASPAR yes 5830500
chr3 133188478 133188499 REST JASPAR yes 71053682
chr3 133188479 133188498 REST JASPAR yes 5830501
chr3 133188479 133188498 REST JASPAR yes 71053683
chr3 133188482 133188486 NFE TRANSFAC yes 5830502
chr3 133188482 133188486 NFE TRANSFAC yes 71053684
chr3 133188529 133188547 ESR1 JASPAR yes 5830503
chr3 133188529 133188547 ESR1 JASPAR yes 71053685
chr3 133188538 133188548 SREBF2 JASPAR yes 5830504
chr3 133188538 133188548 SREBF2 JASPAR yes 71053686
SNP sites on vista42472[chr3:133188180-133188542]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 133188201 rs151276012 C T
FOXA1 FOXA2 RELA
7041997
chr3 133188236 rs185561953 G A
FOXA1 FOXA2 RELA
7041998
chr3 133188245 rs554340548 G A
FOXA1 FOXA2 RELA
7041999
chr3 133188284 rs115684737 T C
EBF1 FOXA1 FOXA2 RELA
7042000
chr3 133188385 rs140472572 T C
EBF1 FOXA1 FOXA2 IRF7 RELA
7042001
chr3 133188491 rs145443928 G A
EBF1 RELA REST
7042002
Genes possibly regulated by vista42472[chr3:133188180-133188542]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 133118839 133194066 + BFSP2 ENSG00000170819.4 133118839 0.98 0.97 4093 30659
Expression level of Genes
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miRNAs possibly regulated by vista42472[chr3:133188180-133188542]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results