EnhancerDB
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  3. vista42483[chr3:133646484-133646682]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42483[chr3:133646484-133646682]
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Tissue distribution of vista42483
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Transcription factor that possibly regulate vista42483[chr3:133646484-133646682]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 133646370 133646675 EGR1 UCSC Txn Factor no Conserved 108530409
chr3 133646423 133647046 CTCF UCSC Txn Factor no Conserved 108530410
chr3 133646438 133646730 RAD21 UCSC Txn Factor no Conserved 108530411
chr3 133646490 133646495 SP1 TRANSFAC yes 71053920
chr3 133646492 133646505 TFAP2A JASPAR yes 71053921
chr3 133646492 133646505 TFAP2C JASPAR yes 71053922
chr3 133646493 133646502 TFAP2A JASPAR yes 71053923
chr3 133646496 133646504 SP1 TRANSFAC yes 71053924
chr3 133646496 133646504 WT1 TRANSFAC yes 71053925
chr3 133646498 133646509 NFKB1 JASPAR yes 71053926
chr3 133646499 133646509 NFKB1 JASPAR yes 71053927
chr3 133646499 133646510 NFKB1 JASPAR yes 71053928
chr3 133646511 133646516 SP1 TRANSFAC yes 71053929
chr3 133646512 133646517 SP1 TRANSFAC yes 71053930
chr3 133646526 133646537 NRF1 JASPAR yes 71053931
chr3 133646530 133646545 ZIC3 JASPAR yes 71053932
chr3 133646530 133646545 ZIC4 JASPAR yes 71053933
chr3 133646531 133646545 ZIC1 JASPAR yes 71053934
chr3 133646557 133646567 SP1 JASPAR yes 71053935
chr3 133646563 133646572 SP1 TRANSFAC yes 71053936
chr3 133646564 133646569 SP1 TRANSFAC yes 71053937
chr3 133646567 133646586 CTCF JASPAR yes 71053938
chr3 133646582 133646592 TEAD1 JASPAR yes 71053939
chr3 133646582 133646592 TEAD4 JASPAR yes 71053940
chr3 133646583 133646591 TEAD3 JASPAR yes 71053941
chr3 133646606 133646611 SP1 TRANSFAC yes 71053942
chr3 133646609 133646621 ZBTB7A JASPAR yes 71053943
chr3 133646610 133646615 SP1 TRANSFAC yes 71053944
chr3 133646616 133646626 SP1 JASPAR yes 71053945
chr3 133646617 133646623 SP1 TRANSFAC yes 71053946
chr3 133646617 133646627 SP1 JASPAR yes 71053947
chr3 133646624 133646636 GLI2 JASPAR yes 71053948
chr3 133646634 133646639 SP1 TRANSFAC yes 71053949
chr3 133646634 133646640 SP1 TRANSFAC yes 71053950
chr3 133646638 133646643 SP1 TRANSFAC yes 71053951
chr3 133646651 133646666 STAT1 JASPAR yes 71053952
chr3 133646653 133646664 STAT1 JASPAR yes 71053953
chr3 133646653 133646664 STAT3 JASPAR yes 71053954
chr3 133646667 133646674 SPIB JASPAR yes 71053955
SNP sites on vista42483[chr3:133646484-133646682]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 133646494 rs374769956 G GC
CTCF EGR1 RAD21 SP1 TFAP2A TFAP2C
7044196
chr3 133646539 rs549863685 G A
CTCF EGR1 RAD21 ZIC1 ZIC3 ZIC4
7044197
chr3 133646550 rs569883167 C G
CTCF EGR1 RAD21
7044198
chr3 133646592 rs372178118 G A
CTCF EGR1 RAD21 TEAD1 TEAD4
7044199
chr3 133646609 rs574130086 G T
CTCF EGR1 RAD21 SP1 ZBTB7A
7044200
chr3 133646650 rs6808547 G A
CTCF EGR1 RAD21
7044201
Genes possibly regulated by vista42483[chr3:133646484-133646682]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 133543083 133614680 - RAB6B ENSG00000154917.6 133614680 0.77 1.0 4098 68196
chr3 133646992 133648656 - C3orf36 ENSG00000221972.2 133648656 0.94 1.0 4099 98026
Expression level of Genes
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miRNAs possibly regulated by vista42483[chr3:133646484-133646682]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results