EnhancerDB
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  3. vista42489[chr3:134031444-134031760]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42489[chr3:134031444-134031760]
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Tissue distribution of vista42489
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Transcription factor that possibly regulate vista42489[chr3:134031444-134031760]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 134031197 134031656 CTCF UCSC Txn Factor no Conserved 108530414
chr3 134031441 134031452 E2F4 JASPAR yes 5870751
chr3 134031441 134031452 E2F6 JASPAR yes 5870752
chr3 134031441 134031452 E2F4 JASPAR yes 71054246
chr3 134031441 134031452 E2F6 JASPAR yes 71054247
chr3 134031455 134031470 TFAP2C JASPAR yes 5870753
chr3 134031455 134031470 TFAP2C JASPAR yes 71054248
chr3 134031460 134031469 THAP1 JASPAR yes 5870754
chr3 134031460 134031469 THAP1 JASPAR yes 71054249
chr3 134031463 134031468 ETS2 TRANSFAC yes 5870755
chr3 134031463 134031468 ETS2 TRANSFAC yes 71054250
chr3 134031476 134031482 ETS1 JASPAR yes 5870756
chr3 134031476 134031482 SPI1 JASPAR yes 5870757
chr3 134031476 134031482 ETS1 JASPAR yes 71054251
chr3 134031476 134031482 SPI1 JASPAR yes 71054252
chr3 134031482 134031497 RUNX2 JASPAR yes 5870758
chr3 134031482 134031497 RUNX2 JASPAR yes 71054253
chr3 134031504 134031515 NFKB1 JASPAR yes 5870759
chr3 134031504 134031515 NFKB1 JASPAR yes 71054254
chr3 134031513 134031517 YY1 TRANSFAC yes 5870760
chr3 134031513 134031517 YY1 TRANSFAC yes 71054255
chr3 134031536 134031544 FOXO3 JASPAR yes 5870761
chr3 134031536 134031544 FOXO3 JASPAR yes 71054256
chr3 134031538 134031552 CREB3 JASPAR yes 5870762
chr3 134031538 134031552 CREB3L1 JASPAR yes 5870763
chr3 134031538 134031552 CREB3 JASPAR yes 71054257
chr3 134031538 134031552 CREB3L1 JASPAR yes 71054258
chr3 134031541 134031548 USF1 JASPAR yes 5870764
chr3 134031541 134031548 USF1 JASPAR yes 71054259
chr3 134031542 134031547 MYC TRANSFAC yes 5870765
chr3 134031542 134031547 USF1 TRANSFAC yes 5870766
chr3 134031542 134031547 USF2 TRANSFAC yes 5870767
chr3 134031542 134031547 MYC TRANSFAC yes 71054260
chr3 134031542 134031547 USF1 TRANSFAC yes 71054261
chr3 134031542 134031547 USF2 TRANSFAC yes 71054262
chr3 134031549 134031561 NHLH1 JASPAR yes 5870768
chr3 134031549 134031561 NHLH1 JASPAR yes 71054263
chr3 134031550 134031560 NHLH1 JASPAR yes 5870769
chr3 134031550 134031560 NHLH1 JASPAR yes 71054264
chr3 134031563 134031573 SREBF2 JASPAR yes 5870770
chr3 134031563 134031573 TFAP4 JASPAR yes 5870771
chr3 134031563 134031573 SREBF2 JASPAR yes 71054265
chr3 134031563 134031573 TFAP4 JASPAR yes 71054266
chr3 134031604 134031615 NFKB1 JASPAR yes 5870772
chr3 134031604 134031615 NFKB1 JASPAR yes 71054267
chr3 134031605 134031615 NFKB1 JASPAR yes 5870773
chr3 134031605 134031615 RELA JASPAR yes 5870774
chr3 134031605 134031615 REL JASPAR yes 5870775
chr3 134031605 134031615 NFKB1 JASPAR yes 71054268
chr3 134031605 134031615 RELA JASPAR yes 71054269
chr3 134031605 134031615 REL JASPAR yes 71054270
chr3 134031608 134031620 INSM1 JASPAR yes 5870776
chr3 134031608 134031620 INSM1 JASPAR yes 71054271
chr3 134031639 134031644 SP1 TRANSFAC yes 5870777
chr3 134031639 134031644 SP1 TRANSFAC yes 71054272
chr3 134031652 134031658 MZF1 JASPAR yes 5870778
chr3 134031652 134031658 MZF1 JASPAR yes 71054273
chr3 134031670 134031685 ZIC3 JASPAR yes 5870779
chr3 134031670 134031685 ZIC4 JASPAR yes 5870780
chr3 134031670 134031685 ZIC3 JASPAR yes 71054274
chr3 134031670 134031685 ZIC4 JASPAR yes 71054275
chr3 134031671 134031685 ZIC1 JASPAR yes 5870781
chr3 134031671 134031685 ZIC1 JASPAR yes 71054276
chr3 134031692 134031697 GATA2 JASPAR yes 5870782
chr3 134031692 134031697 GATA2 JASPAR yes 71054277
chr3 134031697 134031702 SP1 TRANSFAC yes 5870783
chr3 134031697 134031702 SP1 TRANSFAC yes 71054278
chr3 134031697 134031703 SP1 TRANSFAC yes 5870784
chr3 134031697 134031703 SP1 TRANSFAC yes 71054279
chr3 134031700 134031714 MTF1 JASPAR yes 5870785
chr3 134031700 134031714 MTF1 JASPAR yes 71054280
chr3 134031701 134031706 SP1 TRANSFAC yes 5870786
chr3 134031701 134031706 SP1 TRANSFAC yes 71054281
chr3 134031702 134031707 SP1 TRANSFAC yes 5870787
chr3 134031702 134031707 SP1 TRANSFAC yes 71054282
chr3 134031724 134031738 RXRB JASPAR yes 5870788
chr3 134031724 134031738 RXRG JASPAR yes 5870789
chr3 134031724 134031738 RXRB JASPAR yes 71054283
chr3 134031724 134031738 RXRG JASPAR yes 71054284
chr3 134031724 134031739 NR2C2 JASPAR yes 5870790
chr3 134031724 134031739 NR2C2 JASPAR yes 71054285
chr3 134031730 134031744 RORA JASPAR yes 5870791
chr3 134031730 134031744 RORA JASPAR yes 71054286
chr3 134031731 134031741 RORA JASPAR yes 5870792
chr3 134031731 134031741 RORA JASPAR yes 71054287
chr3 134031736 134031740 YY1 TRANSFAC yes 5870793
chr3 134031736 134031740 YY1 TRANSFAC yes 71054288
chr3 134031758 134031773 TFAP2C JASPAR yes 5870794
chr3 134031758 134031773 TFAP2C JASPAR yes 71054289
chr3 134031759 134031778 REST JASPAR yes 5870795
chr3 134031759 134031778 REST JASPAR yes 71054290
SNP sites on vista42489[chr3:134031444-134031760]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 134031448 rs149829104 C A
CTCF E2F4 E2F6
7046307
chr3 134031710 rs114775836 G A
MTF1
7046308
Genes possibly regulated by vista42489[chr3:134031444-134031760]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 133784147 133969689 - RYK ENSG00000163785.8 133969689 0.7 1.0 4101 38245
chr3 134074716 134094321 - AMOTL2 ENSG00000114019.10 134094321 0.73 0.99 4102 37439
Expression level of Genes
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miRNAs possibly regulated by vista42489[chr3:134031444-134031760]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr3 134086646 134086666 - hsa-miR-6827-3p MIMAT0027555 134093288 0.000955542958944044 0.0 0.0 1198
Expression level of miRNAs
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