EnhancerDB
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  3. vista42494[chr3:134051149-134051359]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42494[chr3:134051149-134051359]
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Tissue distribution of vista42494
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Transcription factor that possibly regulate vista42494[chr3:134051149-134051359]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 134051174 134051178 NFE TRANSFAC yes 5873714
chr3 134051174 134051178 NFE TRANSFAC yes 71054431
chr3 134051174 134051179 GATA1 TRANSFAC yes 5873715
chr3 134051174 134051179 GATA1 TRANSFAC yes 71054432
chr3 134051174 134051180 GATA3 JASPAR yes 5873716
chr3 134051174 134051180 GATA3 JASPAR yes 71054433
chr3 134051179 134051190 EBF1 JASPAR yes 5873717
chr3 134051179 134051190 EBF1 JASPAR yes 71054434
chr3 134051183 134051188 TFAP2A TRANSFAC yes 5873718
chr3 134051183 134051188 TFAP2A TRANSFAC yes 71054435
chr3 134051183 134051189 MZF1 JASPAR yes 5873719
chr3 134051183 134051189 MZF1 JASPAR yes 71054436
chr3 134051188 134051196 TBX5 JASPAR yes 5873720
chr3 134051188 134051196 TBX5 JASPAR yes 71054437
chr3 134051191 134051200 HIC2 JASPAR yes 5873721
chr3 134051191 134051200 HIC2 JASPAR yes 71054438
chr3 134051194 134051198 LFA1 TRANSFAC yes 5873722
chr3 134051194 134051198 LFA1 TRANSFAC yes 71054439
chr3 134051240 134051250 TEAD4 JASPAR yes 5873723
chr3 134051240 134051250 TEAD4 JASPAR yes 71054440
chr3 134051256 134051270 TLX1 JASPAR yes 5873724
chr3 134051256 134051270 TLX1 JASPAR yes 71054441
chr3 134051258 134051270 PKNOX1 JASPAR yes 5873725
chr3 134051258 134051270 PKNOX2 JASPAR yes 5873726
chr3 134051258 134051270 TGIF1 JASPAR yes 5873727
chr3 134051258 134051270 TGIF2 JASPAR yes 5873728
chr3 134051258 134051270 PKNOX1 JASPAR yes 71054442
chr3 134051258 134051270 PKNOX2 JASPAR yes 71054443
chr3 134051258 134051270 TGIF1 JASPAR yes 71054444
chr3 134051258 134051270 TGIF2 JASPAR yes 71054445
chr3 134051259 134051269 ID4 JASPAR yes 5873729
chr3 134051259 134051269 TCF4 JASPAR yes 5873730
chr3 134051259 134051269 ID4 JASPAR yes 71054446
chr3 134051259 134051269 TCF4 JASPAR yes 71054447
chr3 134051260 134051275 RFX5 JASPAR yes 5873731
chr3 134051260 134051275 RFX5 JASPAR yes 71054448
chr3 134051297 134051307 SP1 JASPAR yes 5873732
chr3 134051297 134051307 SP1 JASPAR yes 71054449
chr3 134051302 134051317 ZIC3 JASPAR yes 5873733
chr3 134051302 134051317 ZIC3 JASPAR yes 71054450
chr3 134051335 134051346 STAT3 JASPAR yes 5873734
chr3 134051335 134051346 STAT3 JASPAR yes 71054451
chr3 134051347 134051365 IRF2 JASPAR yes 5873735
chr3 134051347 134051365 IRF2 JASPAR yes 71054452
SNP sites on vista42494[chr3:134051149-134051359]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 134051163 rs149756926 G A no 7046602
chr3 134051268 rs79710329 C G
ID4 PKNOX1 PKNOX2 RFX5 TCF4 TGIF1 TGIF2 TLX1
7046603
chr3 134051287 rs115600674 T C no 7046604
chr3 134051343 rs80320945 G A
STAT3
7046605
chr3 134051354 rs192138425 G A
IRF2
7046606
Genes possibly regulated by vista42494[chr3:134051149-134051359]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 133784147 133969689 - RYK ENSG00000163785.8 133969689 0.7 1.0 4101 18540
chr3 134074716 134094321 - AMOTL2 ENSG00000114019.10 134094321 0.73 0.99 4102 57038
Expression level of Genes
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miRNAs possibly regulated by vista42494[chr3:134051149-134051359]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr3 134086646 134086666 - hsa-miR-6827-3p MIMAT0027555 134093288 0.0014016582329603496 0.0 0.0 1198
Expression level of miRNAs
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