EnhancerDB
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  3. vista425[chr1:13920056-13920639]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista425[chr1:13920056-13920639]
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Tissue distribution of vista425
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Transcription factor that possibly regulate vista425[chr1:13920056-13920639]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 13920075 13920085 TEAD1 JASPAR yes 26851869
chr1 13920075 13920085 TEAD4 JASPAR yes 26851870
chr1 13920075 13920085 TEAD1 JASPAR yes 118233881
chr1 13920075 13920085 TEAD4 JASPAR yes 118233882
chr1 13920075 13920087 TEAD1 JASPAR yes 26851871
chr1 13920075 13920087 TEAD1 JASPAR yes 118233883
chr1 13920076 13920084 TEAD3 JASPAR yes 26851872
chr1 13920076 13920084 TEAD3 JASPAR yes 118233884
chr1 13920077 13920092 TFAP2C JASPAR yes 26851873
chr1 13920077 13920092 TFAP2C JASPAR yes 118233885
chr1 13920105 13920117 NHLH1 JASPAR yes 26851874
chr1 13920105 13920117 NHLH1 JASPAR yes 118233886
chr1 13920105 13920118 ZBTB18 JASPAR yes 26851875
chr1 13920105 13920118 ZBTB18 JASPAR yes 118233887
chr1 13920106 13920116 NHLH1 JASPAR yes 26851876
chr1 13920106 13920116 NHLH1 JASPAR yes 118233888
chr1 13920116 13920120 NFE TRANSFAC yes 26851877
chr1 13920116 13920120 NFE TRANSFAC yes 118233889
chr1 13920122 13920137 ZIC4 JASPAR yes 26851878
chr1 13920122 13920137 ZIC4 JASPAR yes 118233890
chr1 13920123 13920137 GLIS2 JASPAR yes 26851879
chr1 13920123 13920137 GLIS2 JASPAR yes 118233891
chr1 13920133 13920150 RXRA JASPAR yes 26851880
chr1 13920133 13920150 RXRA JASPAR yes 118233892
chr1 13920137 13920152 JUND JASPAR yes 26851881
chr1 13920137 13920152 JUND JASPAR yes 118233893
chr1 13920138 13920151 JUN JASPAR yes 26851882
chr1 13920138 13920151 JUN JASPAR yes 118233894
chr1 13920141 13920154 NR2F1 JASPAR yes 26851883
chr1 13920141 13920154 NR2F1 JASPAR yes 118233895
chr1 13920142 13920150 CREB1 JASPAR yes 26851884
chr1 13920142 13920150 CREB1 JASPAR yes 118233896
chr1 13920145 13920149 ESR1 TRANSFAC yes 26851885
chr1 13920145 13920149 ESR1 TRANSFAC yes 118233897
chr1 13920152 13920158 TCF4 TRANSFAC yes 26851886
chr1 13920152 13920158 TCF4 TRANSFAC yes 118233898
chr1 13920168 13920179 E2F6 JASPAR yes 26851887
chr1 13920168 13920179 E2F6 JASPAR yes 118233899
chr1 13920175 13920186 CEBPB JASPAR yes 26851888
chr1 13920175 13920186 CEBPB JASPAR yes 118233900
chr1 13920176 13920187 CEBPA JASPAR yes 26851889
chr1 13920176 13920187 CEBPA JASPAR yes 118233901
chr1 13920180 13920200 TP53 JASPAR yes 26851890
chr1 13920180 13920200 TP53 JASPAR yes 118233902
chr1 13920187 13920207 ESR1 JASPAR yes 26851891
chr1 13920187 13920207 ESR1 JASPAR yes 118233903
chr1 13920188 13920192 LFA1 TRANSFAC yes 26851892
chr1 13920188 13920192 LFA1 TRANSFAC yes 118233904
chr1 13920195 13920205 TFAP4 JASPAR yes 26851893
chr1 13920195 13920205 TFAP4 JASPAR yes 118233905
chr1 13920198 13920211 SMAD2 JASPAR yes 26851894
chr1 13920198 13920211 SMAD2 JASPAR yes 118233906
chr1 13920204 13920218 PAX6 JASPAR yes 26851895
chr1 13920204 13920218 PAX6 JASPAR yes 118233907
chr1 13920209 13920222 DUXA JASPAR yes 26851896
chr1 13920209 13920222 DUXA JASPAR yes 118233908
chr1 13920212 13920223 FOS JASPAR yes 26851897
chr1 13920212 13920223 FOSL1 JASPAR yes 26851898
chr1 13920212 13920223 FOS JASPAR yes 118233909
chr1 13920212 13920223 FOSL1 JASPAR yes 118233910
chr1 13920214 13920220 JUN TRANSFAC yes 26851899
chr1 13920214 13920220 JUN TRANSFAC yes 118233911
chr1 13920217 13920227 SREBF2 JASPAR yes 26851900
chr1 13920217 13920227 SREBF2 JASPAR yes 118233912
chr1 13920226 13920231 H4TF1 TRANSFAC yes 26851901
chr1 13920226 13920231 H4TF1 TRANSFAC yes 118233913
chr1 13920226 13920244 IRF2 JASPAR yes 26851902
chr1 13920226 13920244 IRF2 JASPAR yes 118233914
chr1 13920227 13920248 IRF1 JASPAR yes 26851903
chr1 13920227 13920248 IRF1 JASPAR yes 118233915
chr1 13920239 13920245 ETS1 JASPAR yes 26851904
chr1 13920239 13920245 ETS1 JASPAR yes 118233916
chr1 13920251 13920263 HES5 JASPAR yes 26851905
chr1 13920251 13920263 HES5 JASPAR yes 118233917
chr1 13920266 13920272 HiNF-A TRANSFAC yes 26851906
chr1 13920266 13920272 HiNF-A TRANSFAC yes 118233918
chr1 13920269 13920283 ZIC1 JASPAR yes 26851907
chr1 13920269 13920283 ZIC1 JASPAR yes 118233919
chr1 13920269 13920284 ZIC3 JASPAR yes 26851908
chr1 13920269 13920284 ZIC4 JASPAR yes 26851909
chr1 13920269 13920284 ZIC3 JASPAR yes 118233920
chr1 13920269 13920284 ZIC4 JASPAR yes 118233921
chr1 13920324 13920328 YY1 TRANSFAC yes 26851910
chr1 13920324 13920328 YY1 TRANSFAC yes 118233922
chr1 13920333 13920342 NKX3-2 JASPAR yes 26851911
chr1 13920333 13920342 NKX3-2 JASPAR yes 118233923
chr1 13920356 13920369 HSF1 JASPAR yes 26851912
chr1 13920356 13920369 HSF1 JASPAR yes 118233924
chr1 13920383 13920400 RARA JASPAR yes 26851913
chr1 13920383 13920400 RARA JASPAR yes 118233925
chr1 13920384 13920395 STAT1 JASPAR yes 26851914
chr1 13920384 13920395 STAT1 JASPAR yes 118233926
chr1 13920385 13920398 HSF2 JASPAR yes 26851915
chr1 13920385 13920398 HSF2 JASPAR yes 118233927
chr1 13920394 13920405 HOXA10 JASPAR yes 26851916
chr1 13920394 13920405 HOXA10 JASPAR yes 118233928
chr1 13920395 13920404 CDX1 JASPAR yes 26851917
chr1 13920395 13920404 CDX1 JASPAR yes 118233929
chr1 13920395 13920406 CDX2 JASPAR yes 26851918
chr1 13920395 13920406 CDX2 JASPAR yes 118233930
chr1 13920412 13920417 H4TF1 TRANSFAC yes 26851919
chr1 13920412 13920417 H4TF1 TRANSFAC yes 118233931
chr1 13920437 13920448 FLI1 JASPAR yes 26851920
chr1 13920437 13920448 FLI1 JASPAR yes 118233932
chr1 13920438 13920442 YY1 TRANSFAC yes 26851921
chr1 13920438 13920442 YY1 TRANSFAC yes 118233933
chr1 13920438 13920448 ETV6 JASPAR yes 26851922
chr1 13920438 13920448 ETV6 JASPAR yes 118233934
chr1 13920438 13920449 ETV2 JASPAR yes 26851923
chr1 13920438 13920449 ETV2 JASPAR yes 118233935
chr1 13920439 13920447 FEV JASPAR yes 26851924
chr1 13920439 13920447 FEV JASPAR yes 118233936
chr1 13920441 13920448 SPIB JASPAR yes 26851925
chr1 13920441 13920448 SPIB JASPAR yes 118233937
chr1 13920470 13920474 ESR1 TRANSFAC yes 26851926
chr1 13920470 13920474 ESR1 TRANSFAC yes 118233938
chr1 13920488 13920494 MZF1 JASPAR yes 26851927
chr1 13920488 13920494 MZF1 JASPAR yes 118233939
chr1 13920495 13920505 CEBPG JASPAR yes 26851928
chr1 13920495 13920505 CEBPG JASPAR yes 118233940
chr1 13920497 13920503 JUN TRANSFAC yes 26851929
chr1 13920497 13920503 JUN TRANSFAC yes 118233941
chr1 13920555 13920567 YY1 JASPAR yes 26851930
chr1 13920555 13920567 YY1 JASPAR yes 118233942
chr1 13920555 13920575 TP53 JASPAR yes 26851931
chr1 13920555 13920575 TP53 JASPAR yes 118233943
chr1 13920557 13920577 TP63 JASPAR yes 26851932
chr1 13920557 13920577 TP63 JASPAR yes 118233944
chr1 13920558 13920576 TP53 JASPAR yes 26851933
chr1 13920558 13920576 TP53 JASPAR yes 118233945
chr1 13920560 13920575 TP53 JASPAR yes 26851934
chr1 13920560 13920575 TP53 JASPAR yes 118233946
chr1 13920581 13920592 FOXH1 JASPAR yes 26851935
chr1 13920581 13920592 FOXH1 JASPAR yes 118233947
chr1 13920596 13920611 HNF4A JASPAR yes 26851936
chr1 13920596 13920611 HNF4A JASPAR yes 118233948
chr1 13920597 13920611 NR2F1 JASPAR yes 26851937
chr1 13920597 13920611 NR2F1 JASPAR yes 118233949
chr1 13920597 13920612 HNF4G JASPAR yes 26851938
chr1 13920597 13920612 HNF4G JASPAR yes 118233950
chr1 13920599 13920615 SOX8 JASPAR yes 26851939
chr1 13920599 13920615 SOX8 JASPAR yes 118233951
SNP sites on vista425[chr1:13920056-13920639]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 13920100 rs140503032 C T no 89376
chr1 13920111 rs150426385 G T
NHLH1 ZBTB18
89377
chr1 13920152 rs138177830 A T
JUND NR2F1 TCF4
89378
chr1 13920167 rs16852000 T G no 89379
chr1 13920192 rs184989380 C T
ESR1 LFA1 TP53
89380
chr1 13920193 rs1261025 A G
ESR1 TP53
89381
chr1 13920227 rs149132141 G C
H4TF1 IRF1 IRF2 SREBF2
89382
Genes possibly regulated by vista425[chr1:13920056-13920639]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 13801445 13840543 - LRRC38 ENSG00000162494.5 13840543 0.98 1.0 198 20487
chr1 13909960 13944452 + PDPN ENSG00000162493.12 13909960 0.88 0.99 199 89904
Expression level of Genes
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miRNAs possibly regulated by vista425[chr1:13920056-13920639]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results