EnhancerDB
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  3. vista4252[chr1:185298342-185298619]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4252[chr1:185298342-185298619]
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Tissue distribution of vista4252
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Transcription factor that possibly regulate vista4252[chr1:185298342-185298619]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 185298343 185298348 SP1 TRANSFAC yes 118416434
chr1 185298372 185298378 JUN TRANSFAC yes 118416435
chr1 185298376 185298391 PRDM1 JASPAR yes 118416436
chr1 185298379 185298386 SPIB JASPAR yes 118416437
chr1 185298412 185298429 RARA JASPAR yes 118416438
chr1 185298412 185298432 ESR1 JASPAR yes 118416439
chr1 185298416 185298434 ESR2 JASPAR yes 118416440
chr1 185298417 185298432 ESR2 JASPAR yes 118416441
chr1 185298417 185298437 ESR1 JASPAR yes 118416442
chr1 185298424 185298435 ESRRA JASPAR yes 118416443
chr1 185298470 185298477 NKX3-1 JASPAR yes 118416444
chr1 185298470 185298481 FOXB1 JASPAR yes 118416445
chr1 185298480 185298485 ATF1 TRANSFAC yes 118416446
chr1 185298482 185298492 EN2 JASPAR yes 118416447
chr1 185298482 185298492 ESX1 JASPAR yes 118416448
chr1 185298482 185298492 GBX2 JASPAR yes 118416449
chr1 185298482 185298492 HESX1 JASPAR yes 118416450
chr1 185298482 185298492 LBX2 JASPAR yes 118416451
chr1 185298482 185298492 MIXL1 JASPAR yes 118416452
chr1 185298482 185298492 RAX JASPAR yes 118416453
chr1 185298483 185298491 ISX JASPAR yes 118416454
chr1 185298483 185298491 LHX9 JASPAR yes 118416455
chr1 185298483 185298491 LMX1B JASPAR yes 118416456
chr1 185298483 185298491 PRRX1 JASPAR yes 118416457
chr1 185298483 185298491 RAX2 JASPAR yes 118416458
chr1 185298483 185298491 SHOX JASPAR yes 118416459
chr1 185298483 185298491 UNCX JASPAR yes 118416460
chr1 185298486 185298507 IRF1 JASPAR yes 118416461
chr1 185298488 185298491 MYB TRANSFAC yes 118416462
chr1 185298488 185298499 FLI1 JASPAR yes 118416463
chr1 185298488 185298501 ELF3 JASPAR yes 118416464
chr1 185298488 185298503 STAT2 JASPAR yes 118416465
chr1 185298489 185298500 ELF5 JASPAR yes 118416466
chr1 185298489 185298502 ELF1 JASPAR yes 118416467
chr1 185298489 185298503 SPI1 JASPAR yes 118416468
chr1 185298489 185298503 SPIC JASPAR yes 118416469
chr1 185298490 185298497 SPI1 JASPAR yes 118416470
chr1 185298490 185298498 FEV JASPAR yes 118416471
chr1 185298490 185298511 IRF1 JASPAR yes 118416472
chr1 185298491 185298512 IRF1 JASPAR yes 118416473
chr1 185298492 185298497 ETS2 TRANSFAC yes 118416474
chr1 185298492 185298513 IRF1 JASPAR yes 118416475
chr1 185298494 185298509 FOXP1 JASPAR yes 118416476
chr1 185298495 185298510 FOXP1 JASPAR yes 118416477
chr1 185298496 185298511 FOXP1 JASPAR yes 118416478
chr1 185298497 185298512 FOXP1 JASPAR yes 118416479
chr1 185298498 185298513 FOXP1 JASPAR yes 118416480
chr1 185298499 185298514 FOXP1 JASPAR yes 118416481
chr1 185298500 185298515 FOXP1 JASPAR yes 118416482
chr1 185298514 185298525 USF1 JASPAR yes 118416483
chr1 185298514 185298525 USF2 JASPAR yes 118416484
chr1 185298542 185298545 MYB TRANSFAC yes 118416485
chr1 185298546 185298550 H1TF2 TRANSFAC yes 118416486
chr1 185298546 185298550 NFE TRANSFAC yes 118416487
chr1 185298546 185298550 SRF TRANSFAC yes 118416488
chr1 185298546 185298552 NFYC TRANSFAC yes 118416489
chr1 185298560 185298571 NFIL3 JASPAR yes 118416490
SNP sites on vista4252[chr1:185298342-185298619]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 185298350 rs117937705 G A no 791838
chr1 185298430 rs182440593 C T
ESR1 ESR2 ESRRA
791839
Genes possibly regulated by vista4252[chr1:185298342-185298619]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 185265520 185286461 - IVNS1ABP ENSG00000116679.11 185286461 0.9 1.0 1653 88119
Expression level of Genes
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miRNAs possibly regulated by vista4252[chr1:185298342-185298619]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results