EnhancerDB
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  3. vista4253[chr1:185308384-185308771]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4253[chr1:185308384-185308771]
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Tissue distribution of vista4253
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Transcription factor that possibly regulate vista4253[chr1:185308384-185308771]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 185308313 185308712 RUNX3 UCSC Txn Factor no Conserved 107852097
chr1 185308322 185308715 NFIC UCSC Txn Factor no Conserved 107852099
chr1 185308360 185308969 RELA UCSC Txn Factor no Conserved 107852106
chr1 185308383 185308618 SPI1 UCSC Txn Factor no Conserved 107852114
chr1 185308503 185308687 SRF UCSC Txn Factor no Conserved 107852133
chr1 185308383 185308396 SMAD2 JASPAR yes 33799999
chr1 185308383 185308396 SMAD2 JASPAR yes 118416491
chr1 185308396 185308401 GATA2 JASPAR yes 33800000
chr1 185308396 185308401 GATA2 JASPAR yes 118416492
chr1 185308403 185308412 PITX3 JASPAR yes 33800001
chr1 185308403 185308412 PITX3 JASPAR yes 118416493
chr1 185308403 185308413 GSC2 JASPAR yes 33800002
chr1 185308403 185308413 GSC JASPAR yes 33800003
chr1 185308403 185308413 GSC2 JASPAR yes 118416494
chr1 185308403 185308413 GSC JASPAR yes 118416495
chr1 185308404 185308412 OTX1 JASPAR yes 33800004
chr1 185308404 185308412 OTX1 JASPAR yes 118416496
chr1 185308417 185308420 MYB TRANSFAC yes 33800005
chr1 185308417 185308420 MYB TRANSFAC yes 118416497
chr1 185308421 185308427 TCF4 TRANSFAC yes 33800006
chr1 185308421 185308427 TCF4 TRANSFAC yes 118416498
chr1 185308424 185308438 E2F7 JASPAR yes 33800007
chr1 185308424 185308438 E2F7 JASPAR yes 118416499
chr1 185308448 185308460 DBP JASPAR yes 33800008
chr1 185308448 185308460 HLF JASPAR yes 33800009
chr1 185308448 185308460 DBP JASPAR yes 118416500
chr1 185308448 185308460 HLF JASPAR yes 118416501
chr1 185308449 185308459 CEBPB JASPAR yes 33800010
chr1 185308449 185308459 CEBPD JASPAR yes 33800011
chr1 185308449 185308459 CEBPE JASPAR yes 33800012
chr1 185308449 185308459 CEBPB JASPAR yes 118416502
chr1 185308449 185308459 CEBPD JASPAR yes 118416503
chr1 185308449 185308459 CEBPE JASPAR yes 118416504
chr1 185308449 185308460 CEBPA JASPAR yes 33800013
chr1 185308449 185308460 CEBPA JASPAR yes 118416505
chr1 185308463 185308467 ESR1 TRANSFAC yes 33800014
chr1 185308463 185308467 ESR1 TRANSFAC yes 118416506
chr1 185308464 185308474 TFAP4 JASPAR yes 33800015
chr1 185308464 185308474 TFAP4 JASPAR yes 118416507
chr1 185308477 185308483 ZNF354C JASPAR yes 33800016
chr1 185308477 185308483 ZNF354C JASPAR yes 118416508
chr1 185308481 185308486 MYB TRANSFAC yes 33800017
chr1 185308481 185308486 MYB TRANSFAC yes 118416509
chr1 185308485 185308506 ZNF263 JASPAR yes 33800018
chr1 185308485 185308506 ZNF263 JASPAR yes 118416510
chr1 185308486 185308507 IRF1 JASPAR yes 33800019
chr1 185308486 185308507 IRF1 JASPAR yes 118416511
chr1 185308499 185308504 ETS2 TRANSFAC yes 33800020
chr1 185308499 185308504 ETS2 TRANSFAC yes 118416512
chr1 185308522 185308533 ELK4 JASPAR yes 33800021
chr1 185308522 185308533 FLI1 JASPAR yes 33800022
chr1 185308522 185308533 ELK4 JASPAR yes 118416513
chr1 185308522 185308533 FLI1 JASPAR yes 118416514
chr1 185308522 185308535 ELF3 JASPAR yes 33800023
chr1 185308522 185308535 ELF3 JASPAR yes 118416515
chr1 185308523 185308527 YY1 TRANSFAC yes 33800024
chr1 185308523 185308527 YY1 TRANSFAC yes 118416516
chr1 185308523 185308534 ELF5 JASPAR yes 33800025
chr1 185308523 185308534 ELF5 JASPAR yes 118416517
chr1 185308523 185308535 EHF JASPAR yes 33800026
chr1 185308523 185308535 ELF1 JASPAR yes 33800027
chr1 185308523 185308535 EHF JASPAR yes 118416518
chr1 185308523 185308535 ELF1 JASPAR yes 118416519
chr1 185308523 185308536 ELF1 JASPAR yes 33800028
chr1 185308523 185308536 ELF1 JASPAR yes 118416520
chr1 185308524 185308532 FEV JASPAR yes 33800029
chr1 185308524 185308532 FEV JASPAR yes 118416521
chr1 185308528 185308543 RUNX2 JASPAR yes 33800030
chr1 185308528 185308543 RUNX2 JASPAR yes 118416522
chr1 185308532 185308542 RUNX3 JASPAR yes 33800031
chr1 185308532 185308542 RUNX3 JASPAR yes 118416523
chr1 185308533 185308542 RUNX2 JASPAR yes 33800032
chr1 185308533 185308542 RUNX2 JASPAR yes 118416524
chr1 185308547 185308555 NKX6-1 JASPAR yes 33800033
chr1 185308547 185308555 NKX6-2 JASPAR yes 33800034
chr1 185308547 185308555 NKX6-1 JASPAR yes 118416525
chr1 185308547 185308555 NKX6-2 JASPAR yes 118416526
chr1 185308590 185308608 SRF JASPAR yes 33800035
chr1 185308590 185308608 SRF JASPAR yes 118416527
chr1 185308593 185308605 SRF JASPAR yes 33800036
chr1 185308593 185308605 SRF JASPAR yes 118416528
chr1 185308606 185308611 GATA1 TRANSFAC yes 33800037
chr1 185308606 185308611 GATA1 TRANSFAC yes 118416529
chr1 185308617 185308625 SP1 TRANSFAC yes 33800038
chr1 185308617 185308625 SP1 TRANSFAC yes 118416530
chr1 185308646 185308664 ESR1 JASPAR yes 33800039
chr1 185308646 185308664 ESR2 JASPAR yes 33800040
chr1 185308646 185308664 ESR1 JASPAR yes 118416531
chr1 185308646 185308664 ESR2 JASPAR yes 118416532
chr1 185308647 185308662 ESR2 JASPAR yes 33800041
chr1 185308647 185308662 ESR2 JASPAR yes 118416533
chr1 185308652 185308665 NR2F1 JASPAR yes 33800042
chr1 185308652 185308665 NR2F1 JASPAR yes 118416534
chr1 185308654 185308665 ESRRA JASPAR yes 33800043
chr1 185308654 185308665 ESRRB JASPAR yes 33800044
chr1 185308654 185308665 ESRRA JASPAR yes 118416535
chr1 185308654 185308665 ESRRB JASPAR yes 118416536
chr1 185308655 185308663 NR4A2 JASPAR yes 33800045
chr1 185308655 185308663 NR4A2 JASPAR yes 118416537
chr1 185308663 185308667 LFA1 TRANSFAC yes 33800046
chr1 185308663 185308667 LFA1 TRANSFAC yes 118416538
chr1 185308679 185308697 SRF JASPAR yes 33800047
chr1 185308679 185308697 SRF JASPAR yes 118416539
chr1 185308682 185308686 H1TF2 TRANSFAC yes 33800048
chr1 185308682 185308686 NFE TRANSFAC yes 33800049
chr1 185308682 185308686 SRF TRANSFAC yes 33800050
chr1 185308682 185308686 H1TF2 TRANSFAC yes 118416540
chr1 185308682 185308686 NFE TRANSFAC yes 118416541
chr1 185308682 185308686 SRF TRANSFAC yes 118416542
chr1 185308695 185308713 MAFF JASPAR yes 33800051
chr1 185308695 185308713 MAFF JASPAR yes 118416543
chr1 185308697 185308712 MAFK JASPAR yes 33800052
chr1 185308697 185308712 MAFK JASPAR yes 118416544
chr1 185308701 185308712 NFE2L2 JASPAR yes 33800053
chr1 185308701 185308712 NFE2L2 JASPAR yes 118416545
chr1 185308704 185308710 JUN TRANSFAC yes 33800054
chr1 185308704 185308710 JUN TRANSFAC yes 118416546
chr1 185308722 185308736 E2F7 JASPAR yes 33800055
chr1 185308722 185308736 E2F7 JASPAR yes 118416547
chr1 185308725 185308733 TBX15 JASPAR yes 33800056
chr1 185308725 185308733 TBX15 JASPAR yes 118416548
chr1 185308751 185308764 DUXA JASPAR yes 33800057
chr1 185308751 185308764 DUXA JASPAR yes 118416549
chr1 185308757 185308778 ZNF263 JASPAR yes 33800058
chr1 185308757 185308778 ZNF263 JASPAR yes 118416550
chr1 185308760 185308781 ZNF263 JASPAR yes 33800059
chr1 185308760 185308781 ZNF263 JASPAR yes 118416551
SNP sites on vista4253[chr1:185308384-185308771]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 185308391 rs186498088 A G
NFIC RELA RUNX3 SMAD2 SPI1
791903
chr1 185308402 rs147053431 C T
NFIC RELA RUNX3 SPI1
791904
chr1 185308455 rs111304465 A G
CEBPA CEBPB CEBPD CEBPE DBP HLF NFIC RELA RUNX3 SPI1
791905
chr1 185308477 rs2224026 C T
NFIC RELA RUNX3 SPI1 ZNF354C
791906
chr1 185308572 rs201828994 T C
NFIC RELA RUNX3 SPI1 SRF
791907
chr1 185308635 rs148795186 C T
NFIC RELA RUNX3 SRF
791908
chr1 185308643 rs573437511 TAGTC T
NFIC RELA RUNX3 SRF
791909
Genes possibly regulated by vista4253[chr1:185308384-185308771]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 185265520 185286461 - IVNS1ABP ENSG00000116679.11 185286461 0.9 1.0 1653 78077
Expression level of Genes
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miRNAs possibly regulated by vista4253[chr1:185308384-185308771]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results