EnhancerDB
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  3. vista427[chr1:13949833-13950153]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista427[chr1:13949833-13950153]
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Tissue distribution of vista427
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Transcription factor that possibly regulate vista427[chr1:13949833-13950153]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 13949891 13949895 NFE TRANSFAC yes 26854591
chr1 13949891 13949895 NFE TRANSFAC yes 118234048
chr1 13949897 13949907 ETV3 JASPAR yes 26854592
chr1 13949897 13949907 ETV3 JASPAR yes 118234049
chr1 13949909 13949915 PEA3 TRANSFAC yes 26854593
chr1 13949909 13949915 PEA3 TRANSFAC yes 118234050
chr1 13949910 13949918 FEV JASPAR yes 26854594
chr1 13949910 13949918 FEV JASPAR yes 118234051
chr1 13949915 13949926 CEBPB JASPAR yes 26854595
chr1 13949915 13949926 CEBPB JASPAR yes 118234052
chr1 13949922 13949925 MYB TRANSFAC yes 26854596
chr1 13949922 13949925 MYB TRANSFAC yes 118234053
chr1 13949927 13949941 ATF7 JASPAR yes 26854597
chr1 13949927 13949941 BATF3 JASPAR yes 26854598
chr1 13949927 13949941 CREB3 JASPAR yes 26854599
chr1 13949927 13949941 ATF7 JASPAR yes 118234054
chr1 13949927 13949941 BATF3 JASPAR yes 118234055
chr1 13949927 13949941 CREB3 JASPAR yes 118234056
chr1 13949928 13949940 JDP2 JASPAR yes 26854600
chr1 13949928 13949940 JDP2 JASPAR yes 118234057
chr1 13949928 13949943 JUND JASPAR yes 26854601
chr1 13949928 13949943 JUND JASPAR yes 118234058
chr1 13949930 13949937 JUN TRANSFAC yes 26854602
chr1 13949930 13949937 JUN TRANSFAC yes 118234059
chr1 13949930 13949938 CREB1 JASPAR yes 26854603
chr1 13949930 13949938 GMEB2 JASPAR yes 26854604
chr1 13949930 13949938 CREB1 JASPAR yes 118234060
chr1 13949930 13949938 GMEB2 JASPAR yes 118234061
chr1 13949931 13949943 CREB1 JASPAR yes 26854605
chr1 13949931 13949943 CREB1 JASPAR yes 118234062
chr1 13949932 13949937 ATF1 TRANSFAC yes 26854606
chr1 13949932 13949937 ATF1 TRANSFAC yes 118234063
chr1 13949954 13949959 ETS2 TRANSFAC yes 26854607
chr1 13949954 13949959 ETS2 TRANSFAC yes 118234064
chr1 13949998 13950009 NFIL3 JASPAR yes 26854608
chr1 13949998 13950009 NFIL3 JASPAR yes 118234065
chr1 13950005 13950016 FOXB1 JASPAR yes 26854609
chr1 13950005 13950016 FOXB1 JASPAR yes 118234066
chr1 13950015 13950029 EBF1 JASPAR yes 26854610
chr1 13950015 13950029 EBF1 JASPAR yes 118234067
chr1 13950021 13950032 FOXA1 JASPAR yes 26854611
chr1 13950021 13950032 FOXA1 JASPAR yes 118234068
chr1 13950022 13950033 FOXC1 JASPAR yes 26854612
chr1 13950022 13950033 FOXC1 JASPAR yes 118234069
chr1 13950024 13950032 FOXO3 JASPAR yes 26854613
chr1 13950024 13950032 FOXO3 JASPAR yes 118234070
chr1 13950047 13950060 NFKB1 JASPAR yes 26854614
chr1 13950047 13950060 NFKB2 JASPAR yes 26854615
chr1 13950047 13950060 NFKB1 JASPAR yes 118234071
chr1 13950047 13950060 NFKB2 JASPAR yes 118234072
chr1 13950048 13950059 NFKB1 JASPAR yes 26854616
chr1 13950048 13950059 NFKB1 JASPAR yes 118234073
chr1 13950049 13950059 NFKB1 JASPAR yes 26854617
chr1 13950049 13950059 RELA JASPAR yes 26854618
chr1 13950049 13950059 NFKB1 JASPAR yes 118234074
chr1 13950049 13950059 RELA JASPAR yes 118234075
chr1 13950052 13950064 INSM1 JASPAR yes 26854619
chr1 13950052 13950064 INSM1 JASPAR yes 118234076
chr1 13950054 13950074 RREB1 JASPAR yes 26854620
chr1 13950054 13950074 RREB1 JASPAR yes 118234077
chr1 13950060 13950072 ZBTB7A JASPAR yes 26854621
chr1 13950060 13950072 ZBTB7A JASPAR yes 118234078
chr1 13950062 13950072 RUNX3 JASPAR yes 26854622
chr1 13950062 13950072 RUNX3 JASPAR yes 118234079
chr1 13950083 13950098 AR JASPAR yes 26854623
chr1 13950083 13950098 AR JASPAR yes 118234080
chr1 13950109 13950124 HNF4A JASPAR yes 26854624
chr1 13950109 13950124 HNF4A JASPAR yes 118234081
chr1 13950110 13950125 HNF4G JASPAR yes 26854625
chr1 13950110 13950125 HNF4G JASPAR yes 118234082
chr1 13950117 13950125 RHOXF1 JASPAR yes 26854626
chr1 13950117 13950125 RHOXF1 JASPAR yes 118234083
chr1 13950123 13950136 EOMES JASPAR yes 26854627
chr1 13950123 13950136 EOMES JASPAR yes 118234084
chr1 13950125 13950135 TBR1 JASPAR yes 26854628
chr1 13950125 13950135 TBR1 JASPAR yes 118234085
chr1 13950125 13950136 TBX20 JASPAR yes 26854629
chr1 13950125 13950136 TBX2 JASPAR yes 26854630
chr1 13950125 13950136 TBX20 JASPAR yes 118234086
chr1 13950125 13950136 TBX2 JASPAR yes 118234087
chr1 13950126 13950136 TBX21 JASPAR yes 26854631
chr1 13950126 13950136 TBX21 JASPAR yes 118234088
chr1 13950127 13950135 TBX15 JASPAR yes 26854632
chr1 13950127 13950135 TBX1 JASPAR yes 26854633
chr1 13950127 13950135 TBX4 JASPAR yes 26854634
chr1 13950127 13950135 TBX5 JASPAR yes 26854635
chr1 13950127 13950135 TBX15 JASPAR yes 118234089
chr1 13950127 13950135 TBX1 JASPAR yes 118234090
chr1 13950127 13950135 TBX4 JASPAR yes 118234091
chr1 13950127 13950135 TBX5 JASPAR yes 118234092
chr1 13950131 13950146 SOX21 JASPAR yes 26854636
chr1 13950131 13950146 SOX21 JASPAR yes 118234093
SNP sites on vista427[chr1:13949833-13950153]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 13949927 rs553908617 G A
ATF7 BATF3 CREB3
89700
chr1 13950000 rs146113506 T G
NFIL3
89701
chr1 13950070 rs74056403 A G
RREB1 RUNX3 ZBTB7A
89702
Genes possibly regulated by vista427[chr1:13949833-13950153]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 13909960 13944452 + PDPN ENSG00000162493.12 13909960 0.88 0.99 199 60127
chr1 14026693 14151574 + PRDM2 ENSG00000116731.18 14026693 0.61 0.98 200 23460
Expression level of Genes
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miRNAs possibly regulated by vista427[chr1:13949833-13950153]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results