EnhancerDB
  1. Home
  2. Enhancers
  3. vista42719[chr3:148781596-148781850]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista42719[chr3:148781596-148781850]
Back to top
Tissue distribution of vista42719
Back to top
Transcription factor that possibly regulate vista42719[chr3:148781596-148781850]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 148781600 148781620 RREB1 JASPAR yes 71064451
chr3 148781601 148781615 ONECUT2 JASPAR yes 71064452
chr3 148781601 148781615 ONECUT3 JASPAR yes 71064453
chr3 148781603 148781615 FOXC2 JASPAR yes 71064454
chr3 148781610 148781629 REST JASPAR yes 71064455
chr3 148781613 148781624 RUNX1 JASPAR yes 71064456
chr3 148781616 148781632 T JASPAR yes 71064457
chr3 148781630 148781645 HNF1A JASPAR yes 71064458
chr3 148781631 148781644 HNF1B JASPAR yes 71064459
chr3 148781633 148781637 TEAD2 TRANSFAC yes 71064460
chr3 148781633 148781638 TBP TRANSFAC yes 71064461
chr3 148781633 148781639 TMF TRANSFAC yes 71064462
chr3 148781635 148781648 POU2F2 JASPAR yes 71064463
chr3 148781635 148781649 POU1F1 JASPAR yes 71064464
chr3 148781636 148781648 POU3F1 JASPAR yes 71064465
chr3 148781636 148781648 POU3F2 JASPAR yes 71064466
chr3 148781636 148781649 POU3F3 JASPAR yes 71064467
chr3 148781637 148781649 POU2F1 JASPAR yes 71064468
chr3 148781638 148781647 POU5F1B JASPAR yes 71064469
chr3 148781653 148781665 PKNOX1 JASPAR yes 71064470
chr3 148781653 148781665 PKNOX2 JASPAR yes 71064471
chr3 148781653 148781665 TGIF1 JASPAR yes 71064472
chr3 148781653 148781665 TGIF2 JASPAR yes 71064473
chr3 148781680 148781683 MYB TRANSFAC yes 71064474
chr3 148781717 148781721 YY1 TRANSFAC yes 71064475
chr3 148781732 148781749 ZNF410 JASPAR yes 71064476
chr3 148781736 148781749 HSF1 JASPAR yes 71064477
chr3 148781736 148781749 HSF4 JASPAR yes 71064478
chr3 148781756 148781774 RARA JASPAR yes 71064479
chr3 148781777 148781781 TEAD2 TRANSFAC yes 71064480
chr3 148781779 148781782 MYB TRANSFAC yes 71064481
chr3 148781790 148781805 ESR2 JASPAR yes 71064482
chr3 148781796 148781814 RARA JASPAR yes 71064483
chr3 148781798 148781812 RORA JASPAR yes 71064484
chr3 148781799 148781809 RORA JASPAR yes 71064485
chr3 148781804 148781808 YY1 TRANSFAC yes 71064486
chr3 148781804 148781818 IRF7 JASPAR yes 71064487
chr3 148781815 148781821 SOX10 JASPAR yes 71064488
chr3 148781821 148781835 SPIC JASPAR yes 71064489
chr3 148781832 148781837 GATA1 TRANSFAC yes 71064490
chr3 148781838 148781848 HOXB13 JASPAR yes 71064491
chr3 148781838 148781848 HOXD13 JASPAR yes 71064492
SNP sites on vista42719[chr3:148781596-148781850]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 148781634 rs143507964 T A
HNF1A HNF1B TBP TEAD2 TMF
7098857
chr3 148781661 rs73866945 T C
PKNOX1 PKNOX2 TGIF1 TGIF2
7098858
chr3 148781833 rs74739643 G A
GATA1 SPIC
7098859
Genes possibly regulated by vista42719[chr3:148781596-148781850]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 148709128 148745419 + GYG1 ENSG00000163754.13 148709128 0.72 0.99 4169 27532
chr3 148747914 148804341 - HLTF ENSG00000071794.11 148804341 0.66 0.99 4170 77509
chr3 148847371 148891519 + HPS3 ENSG00000163755.4 148847371 0.61 0.99 4171 34479
Expression level of Genes
Back to top
miRNAs possibly regulated by vista42719[chr3:148781596-148781850]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results